Triplophysa rosa: 130547405
Help
Entry
130547405 CDS
T09216
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130547405 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
Other domain-containing proteins
Patched domain-containing proteins
130547405 (ptchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
130547405
NCBI-ProteinID:
XP_057179339
LinkDB
All DBs
Position
LG23:17217060..17228518
Genome browser
AA seq
912 aa
AA seq
DB search
MLVTRRWERLATRTLFLALALLLHSRMLRQVLHEGLRTSFHKLGHFVANHPVFFASAPVL
ISILLGASFSRYRIEENVEYLLAPKHSLAKIEGNLVDSLFPVNRSKHTLYSDLQTPGRYG
RVIVTSRRGSVLDPHYVSSVLKLHNTITQIQVPMLGFNYTFAHLCLLDDSKNCIVDDILR
VLEEMRSARASNRSIPLLRYPITRLKDGREAYIGHQLGGVQTGGRDGVRSAQALQLTYYL
HPASPLNEVVAAHWELVFCRELDDFGEAHPELGLYPFTSSSLQRDFQRTSRVSERPLLFS
LAVCLSLAMLCCSMRDCVRTKPWLGLLALVTVSLATLTSAGIFNLTGGKYNSTYLGIPFV
MLGHGLFGTFEMLSSWRRTREDQHVKERVAAVFSDCMLPFTASTALHVVTFGIGASPFTN
IEAVRLFCQNACISVLFNYLYILTLYGSNLVFAGYLENNYRHSLFCRRVPKPELLQQKPA
WYRFLMYTHYNEEATETGPLRAYESHLLLAFMKRYYCDWITNTYVKPFVVLFYLVYVSFA
LMGYLQVSEGSDLSNVVAKETSTIAYTRAQQRYFSSYSPVIGFYIYESIEYWNTSVQEDL
LQYTGGFERISWFESYLNYLHGLNVTTSLSRSNFTEHLRSGFLRQPCYMHFSDDIIFAKR
PDGEFDVVASRMFLVAKTTENKREEMSILLDTLRKLSLTSRVKFIIFNPSFVYMDRYASS
VGAPLKNSCIAAVFLLFFSTFLAADPLVNAWLTVTVASVEFGLVGFMTLWQVELDCVSVL
CLIYGVNYAVDSSAPLVSAFALGRESTRTRWVKLALERHGVPALQSYLCYGAALLPLAAV
PSNLTRTLFRCLFLTAIITAFHCLAILPVLLTFLPPSKKNRREQKNAAEDREEIECVEMV
DSTRVVDQITTV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaccaggcggtgggagaggctcgcgacccgcacattgttcctcgccctcgcg
ctgttgctgcattctaggatgttgcgacaagttttgcacgaggggctgaggacgtcattc
cacaaactgggccactttgtagccaatcatccggtgtttttcgcctccgcgcccgtgttg
atctccatcctgctcggcgcgagcttcagcagataccgcatagaggaaaacgtggagtac
ctgttggcccctaagcacagcctggcgaagatcgaggggaacttggtggatagtttgttt
ccggtgaaccggtccaaacacacgctgtactcggacctgcagacacctgggagatatggc
cgggtcattgtgacctcgcgcagggggagcgtgctggaccctcattacgtcagttctgtg
cttaagctccacaacacaatcactcagatccaggtgcccatgctgggcttcaactacacc
tttgcccatctctgcctgctggatgacagcaagaactgcatcgtggacgacatcctccgg
gttcttgaggagatgcggtcagcacgggcgtctaaccgttccataccacttctgcgttac
cctatcaccagactcaaagacgggcgggaggcctacataggccaccaactgggcggtgtc
cagacgggaggaagagatggggttcggtccgctcaagcccttcagctcacatactacctg
cacccagccagcccgctgaacgaggtggtggccgctcactgggagctggtgttctgcagg
gagcttgacgactttggagaggctcacccggagcttggcttgtaccccttcacctcctcc
tctctacaaagggacttccaaaggacgagtcgggtgtcggagcggccactgctttttagc
ctggctgtgtgtctctcgctagcgatgctttgctgctcgatgcgggactgcgtgcggact
aaaccctggctgggtttgctggctctggtaacggtcagcctcgctacgctcacctctgcg
ggcatcttcaacctcacgggtggaaagtacaactcaacatacctcggcattccttttgtc
atgctgggtcatggcttgttcggcacatttgaaatgctgtcatcttggcgtcggactcgc
gaggaccagcacgtaaaggagcgtgttgcggctgtgttctcagactgcatgctgccattc
acagccagcacagccttgcacgtggtaacattcggcatcggagccagtccattcacgaac
atcgaggccgtgcgtctcttctgtcaaaacgcctgcatctcagtgctcttcaactacctc
tacatcctcaccttatacggttccaacctggtgttcgccggctacctggaaaacaactac
cgccacagtttgttctgcaggcgcgtcccgaaacccgagttactccagcagaagccagcg
tggtatcggttcctcatgtacacgcattacaacgaggaggccacggaaaccggacctctg
cgtgcttacgagagtcacctccttttagccttcatgaaacggtattactgtgactggatc
accaacacttacgtcaaaccattcgtggttcttttctacctggtctatgtgtccttcgcc
ctcatgggctaccttcaggtcagcgagggttcagatcttagtaacgtggttgccaaggaa
acaagcaccatagcatacacccgtgcccaacagcggtattttagtagttacagccccgtg
atcggcttctacatctacgagtcgatcgagtactggaacaccagcgtgcaagaagacctc
ctacagtacaccggaggattcgaacgcatctcctggtttgagagttacctcaactacctt
cacggcctgaacgttaccacaagcctgtcgcgcagcaacttcaccgaacacctgcgatcc
ggatttcttcgtcaaccctgttacatgcacttctcggatgacatcatcttcgccaagcgt
ccggacggcgaatttgacgtggtggcttctcgtatgtttctagtggccaagactacggaa
aacaaacgagaggagatgtcaatcctactagacacactgaggaagttatcgctgacctcc
agggtaaagtttattatctttaatccatcctttgtgtatatggaccgctacgcttcatcg
gttggcgcaccgctgaagaactcttgcattgctgcggtttttctgctgtttttttccacc
tttttggcagctgacccactggtgaatgcctggctgactgtgacggtagcctccgtcgaa
ttcgggctggtgggtttcatgactttgtggcaggtagagttggactgcgtctcggtgctg
tgtctgatatacggagtgaactacgccgtagactccagcgctccgctagtgtccgccttc
gctctaggccgggaatctacccgcacccgctgggtaaaactggcactggagcggcacgga
gttcctgcccttcagagctacttgtgttacggggctgctctgctccctctggcggccgtg
ccatctaacctcacccgcacgctctttaggtgcctctttcttaccgccatcatcacagcc
ttccactgtctggccatcctccccgtcctgctcaccttcctgccaccctccaagaaaaat
aggagggaacaaaagaatgctgcggaagacagggaagagattgagtgtgtggagatggtg
gacagcacacgggtggttgatcagattaccactgtctga
DBGET
integrated database retrieval system
