Triplophysa rosa: 130547573
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Entry
130547573 CDS
T09216
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
tros
Triplophysa rosa
Pathway
tros04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130547573 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130547573 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tros00537
]
130547573 (cntn1b)
Cell adhesion molecules [BR:
tros04515
]
Immunoglobulin superfamily
Contactins
130547573 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tros00537
]
Others
130547573 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
CsgH
Motif
Other DBs
NCBI-GeneID:
130547573
NCBI-ProteinID:
XP_057179601
LinkDB
All DBs
Position
LG24:6349084..6358851
Genome browser
AA seq
1029 aa
AA seq
DB search
MVTPAMLLSVLSTLFLSVAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRVRANPPAIIKWWLNNWEIKLMEQPDEHFSLVGGNLVITNPDKGKHAGKYVCVANN
VYGTVISKEAVVKFGYLNQFPTDEREAVNVKEGQGAVLLCSPPSRYPGEVLFRWIYNDFP
NFIIPDQRRFVSQTTGNLYIAKVEASDVGNYSCFVSSPTIGKSVFSMPIPLIPQIEKEVK
RYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLL
NVQYEDEGSYECETLNIKGMDWYRQWLYVEGPPEWAEHINDTERDVGSELTMRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENEWGSIYANAELRVVSCAPTFIYN
PVKKILLGAENGRVVIECKPRAAPKPKFIWKRGSELLNNSSRMLIWDDGSLEILNATKSD
EGSYTCYAENDRGKGNSTGTLTITEATKITVAPSVSEAVVGDSIVLQCSASYDPSLDITF
IWTVDSHIINFYTEWDHYELLRGHESSGDLLIKNIQAKHAGRYSCTAQTIVDNATAEADV
FVKGLPGQPGGVRVEEIGDTSVKLRWCLGSDHGNPLIQHVVQTRNFYALDLEDWKTASTT
PVFLDGSAESATVVDLYPWMQYEFRVYAINEFGAGECSRPSIKIKTWDARPTMAPTDVNG
QVGITGELIVTWSPVNPQFFFGKKFGYVVAFKQHEDYEWKWSTVEDPETRRYIYREKMTP
DTEIQVKVSTFNNKGEGPASLISVVFSPRHAPSEAPLDVYARQVTSTEALVWWLPVYQAP
PNWVDGYQIRYWRKYDDNEAAACRVLVHRMVNQTRLENMRPDSHYLIEVRAFNGAGLGPP
SEHCEMFTRRPPPSRRLRVYKYVSFNRKWLYLYWDHIYNYWNESYVEGYKILFRKEGERY
GKLYTTGRHYIDFSMPETGDYVIEVRARCEGGDGPISQIRVQGKAALGATSLSLVSLVLL
ALGWMNLSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccagccatgcttttgtccgtcctctccaccctcttcttgtctgttgctgcg
attaagcccaggatctttgaacccagaatctttgacaaggaggctacaggctttgggcct
atatttgaggaggaaccactggacacggtgtacgcagaggattccccagaaaacaaaata
tccatgaactgcagggtgcgagccaacccaccggccattataaaatggtggttaaacaac
tgggaaattaaactgatggaacagcctgatgagcactttagcctggtgggcggaaacctg
gtgatcaccaacccagacaaaggaaagcatgctgggaaatatgtttgcgtggccaataat
gtgtacggaacggtcatcagcaaggaggccgtcgtcaagtttggatatctgaatcagttc
cctacagatgagagggaggcagtgaatgttaaggagggtcagggggcggtgctactgtgt
tctccaccctctcgctatccaggcgaggtgctgttccgctggatctacaacgactttccc
aacttcatcatccccgatcagaggcgctttgtgtctcagaccactggcaatctgtacatc
gctaaagtggaggcctctgatgttgggaattattcttgctttgtgtcaagcccgaccatc
ggcaagagtgttttcagcatgcccatacctctgattccacaaatcgagaaggaggtgaag
agatatcctgcagatattcgtgttaaatttcccaagacatatgctttggtgcatcagaac
atcactttggagtgctttgcccttggaaatccactcccacacatccgctggaggaaatta
gacgctgatcttccacccaactacgaagtcagcatgaatggagctttgctgcacttgcta
aatgtgcagtatgaagacgagggcagctacgagtgcgagaccctcaacattaaggggatg
gattggtatcgccagtggctctatgtagaaggtccaccagaatgggcggagcacatcaat
gacacagagagggatgttggcagtgagctcactatgagatgtgtcgctgtggggaagccg
ttaccgtggatacgctggctgaaggatggctactcatatggcaaaggggagcttaaattt
tccagtctaacgtttgaagactcaggcatgtatcagtgcattgctgaaaacgaatggggg
agcatctatgccaatgcagagctacgggtcgtctcgtgtgcaccaacattcatttacaat
ccagtgaaaaagattttgctaggggctgaaaatggacgcgtggtgatagagtgcaaaccc
cgcgctgctcctaaacccaagtttatctggaaaagaggttcagaactgctaaacaactct
tcaaggatgcttatctgggatgatggttctctagagattctgaacgcaacgaaaagcgac
gagggctcatacacgtgctatgctgagaatgaccgaggcaaaggcaacagcacagggacc
ctcactatcaccgaggccaccaagatcactgtagctccatcagtctctgaagcggttgtt
ggtgacagtatcgttctccaatgttctgcgtcctatgaccccagtctggacatcaccttt
atctggaccgtggactctcacatcatcaacttctacacagaatgggatcattatgagctg
ctcaggggtcacgagtccagtggagatctgctgattaagaacattcaggcgaagcatgct
ggacgttacagctgcacagcgcagactatagtagacaacgccactgcggaagccgatgtt
tttgtcaaaggtttgcctggacagccagggggcgtccgcgtggaagagatcggagacaca
tcagtaaagttacgttggtgtctgggatcagaccatggcaatccactcatacaacatgtt
gtgcaaacacgaaacttctatgcgctggaccttgaagactggaaaaccgcatccaccact
ccggtgtttctggatgggtcagcggagtcggccaccgtggttgacctttacccctggatg
caatatgagttccgtgtgtatgccatcaatgaatttggagctggggaatgcagtcgcccc
tccattaaaatcaagacatgggatgccaggccaacaatggctcctactgacgtcaacggc
caagtgggaatcactggagagctcatagttacctggagccctgtgaatcctcagttcttc
ttcggtaaaaaattcggctacgttgtggcgttcaagcagcacgaggattacgagtggaag
tggtcgaccgtggaggatccggagaccagacgttacatctacagagagaaaatgacacca
gacactgagatccaggtgaaagtgagcacctttaataacaaaggtgaaggacctgcgagc
ctcatctcagtggtcttctccccaagacacgcaccaagtgaagctccattagatgtatac
gcccggcaggtaacctccacagaagctttagtctggtggctacccgtctatcaggcacca
ccaaactgggttgacggataccagattcgttattggagaaaatacgatgacaacgaagcg
gctgcttgtcgagtgctggtgcacagaatggttaaccaaacacgcctggaaaacatgcga
cctgactctcactaccttatagaggtacgagcgttcaatggggccgggctcgggcccccc
agcgaacactgtgagatgttcacaagaagaccacctccaagtcgccgtttgagagtgtac
aaatatgtcagcttcaaccgcaaatggctctatctgtactgggatcacatctataactac
tggaacgagtcttatgtggagggttacaaaattttgttccgtaaggaaggcgagcgatac
ggaaagctttacaccacgggcagacactacatagacttctccatgccagagactggagat
tatgtcattgaggtcagagcacgctgtgagggaggtgatggacccatatcacaaatcaga
gtgcaaggtaaagcagctctgggtgctacatcgctcagcctggtctctctcgttctgttg
gctttgggctggatgaatctaagtctttag
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integrated database retrieval system
