Triplophysa rosa: 130547632
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Entry
130547632 CDS
T09216
Symbol
utp20
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tros03009
]
130547632 (utp20)
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130547632 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
130547632
NCBI-ProteinID:
XP_057179718
LinkDB
All DBs
Position
LG24:2164389..2181554
Genome browser
AA seq
2799 aa
AA seq
DB search
MKLKTKPASHKSENTFRYLTFSERLANVNIDVIHRIDRTGSYAEEVETYFFVALLKWKDL
NLTEHFTTFQREVSSKSQSFNMLVFHQDAIVXSLKTHLSVKNGMAYHPLLDLVVQLARDL
QMDFYPHFSDFFIIITSLLDKQDTEVLEGAFTCLSYLYKYLWRMMVKDMDKIYSLYSKLL
AHKKDHIRNFAAESFSFLMRKVVDYDALFTLMFSNLSEHPQKAKGVGQLIFEMCRGVRNM
FHSCAATALPVVLKKLGPAVDTQDVDVSLDSVKEALDQMVESSANYVDREHLLPLWDSLH
SSLKEVLEKLEASNANQANEQMERLLYIYHTLVEHRQGAKITNPQSVCETILHLVQASGL
SYSSCRLLLQVVTSFLMGENLSLPASSIQELVKKVFNSGMDRDLILSFSEEMFDMKQFEQ
LFLPSLLVYLERIFCTEDSVNKQLVLELLARLILSKAPPPTDGSMAFEKYPLVFTGQHLR
STGPERDQLVSVPQLIMSFIDVPVDQPISDLSLPWAALVLLPHVRPLEAASVIAAVTTLL
NRLLDEVCSETLSRAGLFVARQALSTLLSFKETAVVLSLLPVELVRGIIEKFPTDLSALL
LGDLYYTRLSLNGCSSQLSHDSLLDLYHVLHSNFSSNMSKIRLLTLRIMSNFEADLPAQG
EDRSTVQTVFSICLQAELVPATVQDYREKLLHLRKLRHDLVQSCLPRGPFYEAPLRYLIA
MLFVNFQPLWDPVIDLLVSHAKEMDNKSFWKVYYEHLEMVAGLAEEELHLDEEDDDGNNQ
AAVRIRGPGMDVIESGDVGVLFLDQLDKTSDPSERTDFTNFRNLLWRTMAQVPDRVEPRS
RELSPLLLRFISNEFYPADLLVAPTQNFLKRSSSSSEQEMAEDDDADMEDEENDDSKHSK
RKVPRRAAAKQLVAHLKVFSKFTNPRSLYLEPSLYKMYTELLCHKDQQMQKIALDCLMTY
KDPNIVPYKENLERLLDDKYFKDEIVHFNIADEGAVVQTSHRPQLIPMLMRILYGRMRTR
IGNKFQGKSAATSRSSIVLRFLAGCQPEEMGMFIDLLLEPVRHHGEGMCLAAVERAVAET
DPSAALPVGRLHSLLNIIDIIIHKLGHLILIHLAKVLQILLCITASVSFLLDHREQLKSG
CISPLKNLRRLGILRIQDFFEGFESYSFTADELDAAFQAVVWPQVCRLPTESPYAPTPLL
KLIYVWSRNARFFPLLAKQRPGHSECDVLRNVFALLSVKNVSPNTVAVVMDMAESLLVTP
DFEPTENEPEVIANNCVIPEAEQSSDSTDSLTVGCRLLLPHVSAVLQYLSGVVRNSERLK
KKKFRTQVSKELNVLSKISRFVTDKQQSSTLISLLLPYLHKPNTAQETVLDILGTVQNLL
RQCSDPGVFLKPLCKLCSVIHDKVPRQALCEVFKTVSDLNGDLAYIKDIVIELNAFDSRH
LDEIHFDVRLAAFQKANKYIKEMSTLDLNYLNAVMHNCFHSIEIGDMSLADCATMCLSVV
MTQLTTVGCPKAEYREIVQCTILDAVRKGLKSKTESVRNDYTTVLASLIXTFPDRSEFCD
LVQLTDHNDPESDFFEHMKHIQMHRRGRALRKFAKQLTEGTVVMSSRTMQNYIMPYAMIA
LFDEKLLKYEPMTTAAVELIGAVCKRLSWSQYLYYVKQFVHILQMGLTEQKLAVSLLVTV
LEAFHFDHHTLSKEVDAAKNRTTEPVVVEEEAKDEEAETMEMDESDFEEAMETDDAGAAA
STTTNAMDTETQVSVKAKEGKESQAKKAPPVVSSGLPQSPQDLEALISSIHQTVTQSILP
KLHKCLIAKVKRDDEHKTVKSKEVMDEEVVRVPIAFAMIQLMRSLPQDVMEANLPGVLLR
VCVHLKSRFQEIRDVARSTLVKIIETLGHQYLHYLLREMKSVLVKGYQVHVLTFTLYHLL
SILSPSLTGGDLDPCMDMLITIFNNELFGDVAEEKDIKGIVSKVMEARHNKSFDSYELMA
RFCSQERIVHLIIPLKEILENTVSLKVSKRVHAVFKRIVAGLLLNKSMSPQSILLLSHGL
VSQSLPLITSKNKEKILPPPDPRLPPPSCLLLPPTPKRGGVRAAINSKTNTHILVETGLS
LLYCSLKTSKVNSSVVSVKEMLDPFVSLLLDCLSSMHVKVITEALQAFVWILNFPLPAVE
QNFDQLSKQLFILLKDYAKAGAARGENFALVQNCFKAITVLVKSVKQRISETQLQVLLGY
AEEDIYDNSRQATAFGLLRAILSRKLVVPEMEDVMKKVAKLSINGANEQVRMRCRQIYLR
YLMDYPLGKKLKNHFDFIVAQLSYEYDTGRQSALEMLAFIFQTFPQNLLLEHCGLFFVPL
SLVILNDDSGSCKKMATLAVKSLLRKLDLQHQNSMFTLVNNWLTGEKMALRRLGTQMCGL
FAEVEGDKFNRRLEGLIPLIEREIHTSNFEDIEEEEDEKAADRLLFCYLTLIVKLIKDCG
FLELPKPADLLENTWGHIDSHLRYPHSWVWLTASQIFGLLFAAHKPEDLVTLWSSQDTTQ
KNTQPVASVFLFNNLDQKMRELALSFCYQLQSNFLDIASGEQVVKNLLYVAKVIYLISPD
SDTVTQTEEQEEVKGIEEGDAEENKDDDEEMDKEHQEVQELEEQQNENRRPTLLWVIKKL
SLLAKREAANTPKVPLKRTCVFKFLGAIAVDLGKDRLRPYLTTIIAPLYRELDSTYADQD
PTLKNLAQELIELLKKLVGLERFSLAFAAVQKEATRRRASRKKQKAMQAVVKPDIAAKKK
IKKQLKKTETKKRKIQAVRSGHTAKKPKSSTLRDLAIMK
NT seq
8400 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaaaccaagcccgcgtctcataagtctgaaaatactttccgatatctcacg
ttttccgaaagactcgcaaatgttaacatagatgtcatccatcgcattgatcgaacggga
agctacgcagaggaggtggaaacctatttctttgtggctctattgaaatggaaagacttg
aatttgacagaacacttcacaacctttcagcgagaggtgtcgagcaagagtcaatccttc
aacatgctagtgtttcaccaagatgccatcgtgtagagtcttaagacgcatctttctgtg
aagaacggcatggcttatcatcctctattggatcttgtagttcagcttgcccgggacctc
cagatggacttttacccccacttctctgatttcttcatcatcatcacatctttgttagac
aaacaggacactgaggtgttggaaggggctttcacctgtctgtcgtacctctacaaatac
ctctggaggatgatggtaaaggatatggacaagatttacagtctttacagtaaacttttg
gctcacaagaaggatcatatccgtaactttgctgctgagagcttttcttttttgatgaga
aaagttgtagactatgatgctctgttcacactcatgttctccaacctgtctgagcatcct
cagaaggccaaaggagtaggtcagctgatctttgaaatgtgtcgcggagtccgcaacatg
ttccactcctgtgccgctacagctcttccagtggtgctgaagaaacttggaccagccgtg
gacacgcaggatgtcgatgtctctttagactccgttaaagaagctctggatcaaatggtg
gagtcttcagccaactatgttgatcgagaacatctactgccgctttgggattctttacac
agctctctgaaagaagttctcgaaaagctagaagcgagcaatgccaaccaggctaatgaa
caaatggagaggcttttgtatatctaccacaccctggtggagcatcgccaaggagcgaaa
atcacaaatcctcagtcggtctgtgagacgattcttcatctagttcaggcttccggactc
tcatactcctcgtgcagactgttattgcaggtggtcacttcttttcttatgggggagaat
ctgtcattacccgctagcagtatccaggaactagtaaaaaaggtcttcaacagcggaatg
gacagagacctcattttatcgttttccgaagaaatgtttgacatgaaacagtttgagcag
ttgttcttgcccagtttgcttgtgtatcttgagcgaatcttctgcaccgaagactctgtg
aacaagcagctggttctggaattgttggccagactgattctgtccaaagctccgcccccc
acagacggctccatggcttttgagaagtacccattggtctttactgggcagcacctcagg
tcaactggacctgaaagagaccagctcgtgtctgttccccagctgattatgtctttcata
gacgtccctgtggaccaaccgatttctgatctttctcttccttgggctgcgttggtgttg
cttccacatgtcagacctttagaagcagcgagtgttatagcggcagtgaccactctgctg
aacagattactggatgaagtgtgcagtgaaaccctgagcagagctggtctgtttgtagcc
cgacaggcccttagcaccctgctgagtttcaaagagacggcagtggtgttatcattactc
ccagtagagctggtcagaggcatcatagaaaaattccccacggatctttcggcgctgttg
ttgggagatctgtactacaccagactttccctcaacggttgctcctcgcagctttcccat
gattccctgctggatttataccatgtactacattccaatttttcctccaacatgtctaag
attcgtctgctgactttgcgaatcatgtcaaactttgaggccgatctcccagcgcaggga
gaggaccgctcaaccgtgcagacggtgttttccatctgtctgcaggcagagctggttccc
gccaccgttcaggactacagagaaaagctgctacatcttcgtaaactccgtcatgatctg
gttcagtcctgtctgcctcgcggacctttctatgaggctcctctccgttatcttattgca
atgctgtttgttaatttccaacctttgtgggatcctgttattgatctgctggtgtcacat
gctaaagaaatggacaataagtcgttctggaaggtgtactatgaacatctagagatggtc
gctggtttagctgaggaagagctgcatttggatgaggaagacgatgatggaaataatcaa
gccgcagtgcggataagaggcccgggaatggacgtgattgaaagcggtgatgttggagtt
ctgtttctagatcagctggacaagacatcagatcccagcgagcgaacggacttcacaaac
ttccgcaatctgttgtggcgaaccatggcccaggttccggacagagtggagccacgcagc
cgagagctcagcccgttactgctgcgcttcatcagtaatgagttctacccggccgacctg
ctagtggctcccacccaaaactttttgaagaggagcagctcttcatcggaacaggagatg
gctgaggatgatgatgctgacatggaggatgaagaaaatgacgattccaaacactccaag
aggaaagtgccaagaagagcagccgccaagcagctcgttgctcacctgaaggtcttctcc
aaattcaccaaccccagatctttatatctggagccgagcttatacaaaatgtacacagag
ctactgtgtcataaagaccaacaaatgcagaagatagcactggactgcttgatgacatac
aaagacccaaacattgttccatacaaagagaacctggagaggcttttggacgacaagtat
ttcaaagacgagatcgtccactttaacatcgcagacgagggagcagtggtgcagacctca
caccgacctcaactcatccccatgcttatgaggattttgtacgggcggatgcgcaccagg
attggtaataagtttcaggggaagtcggccgcgacctcacgctcgtccatagtgctgcgc
ttcctggcgggatgtcagccggaggagatgggcatgtttatagatcttctgctggaacct
gttcgtcaccatggcgaaggtatgtgtctggcggcggtggagcgggccgtagccgagacg
gacccatccgccgctctgcctgtgggtcggctgcacagcctgctcaacatcatcgacatc
atcatccataaactgggtcacctcatcctcatccacctggccaaagttctgcagattctg
ctctgcatcacagcctcggtctccttcctactggatcacagggaacagctgaagtccggt
tgcatcagccctctgaagaacttgcgtcggctggggattctgcgcatacaggacttcttt
gaaggctttgagtcttacagcttcactgcagatgagctggatgctgcgtttcaagcggtg
gtttggcctcaggtgtgtcgtctgccgactgaaagcccttatgcaccaacacccctcctg
aagctcatctatgtctggagccgaaatgcaagattttttcctttacttgccaagcagagg
cctggccactccgagtgcgacgttctccgtaacgttttcgctctgctctccgtcaaaaac
gtgtctcccaacactgtggccgtggtgatggacatggccgagagtctgctggtcactccg
gacttcgaacccaccgagaacgagcccgaggtgatcgcgaacaactgtgtgatcccggag
gccgagcagagctctgacagcacagattctttgacggtgggttgccgtctgctgctccct
cacgtttcagcggttcttcagtacctcagcggagtcgtgaggaactctgaacggctcaag
aagaaaaagttcagaactcaagtgagcaaagagctcaacgtcctttccaagatcagcagg
tttgtgactgataagcaacagagctcaacgctgatcagtttacttctgccttaccttcac
aagccaaacactgctcaggaaacagtgttggacattctcggtacggtgcagaacttactg
cggcagtgctcagatcccggcgtgttcctcaaacccctctgtaaactttgctccgtcatc
cacgacaaagtcccgcgtcaggctctgtgcgaggtgttcaagaccgtatcggatctgaat
ggcgatcttgcgtacatcaaagacatcgtcattgagctcaacgcgtttgacagtcgacat
ctagatgagattcacttcgatgttcgactggcggctttccagaaggccaacaagtacatt
aaagagatgagcacgctggatctcaactacctaaacgctgtcatgcacaactgctttcac
tctattgagatcggtgacatgtctttggccgactgcgccaccatgtgtctgtcagtggta
atgacacagctcaccacagtcgggtgcccaaaagcagaatacagagagattgtgcagtgc
acaatactagatgcggtgcgcaagggtttgaagagcaagactgagagtgtgagaaacgat
tacactacagttctggccagtctaatctagaccttcccggaccgatcagagttttgtgac
ctggtgcagctgacggatcacaacgatccagagtccgatttctttgagcatatgaaacac
atccagatgcacaggagggggcgagcgctccgaaagttcgccaagcagctgaccgagggc
acggttgtgatgtcttcacgcaccatgcagaattacatcatgccttatgccatgatcgct
ctgtttgacgaaaagctgctgaagtatgagcccatgacaacagccgcagtggagctgatt
ggtgccgtgtgcaaacgtctgtcctggtcccagtatttgtactacgtcaagcaattcgtc
catatactacagatgggattaacggaacaaaaactggctgtcagcttgctggtgaccgtt
cttgaggccttccattttgaccaccacaccctcagtaaagaagtcgacgctgccaaaaac
agaacgacagagcctgttgttgtggaggaagaggctaaagatgaggaggcagaaaccatg
gagatggacgaaagcgattttgaggaagccatggaaaccgatgatgcgggagcggctgct
tccacgacaacgaatgccatggataccgaaactcaagtgtctgtcaaagcaaaagagggc
aaagagagtcaggcgaagaaagcaccccctgttgtcagcagcggacttccacagagtccg
caagatctggaggcgctgatttcctccattcatcagacggtcactcagagcatcctgcct
aaacttcataagtgcctcatcgcgaaggttaaacgtgatgacgagcacaagacggtgaag
tctaaagaggtgatggatgaagaagtggtccgagttcccatcgccttcgctatgattcag
ctcatgaggtctctgccgcaggacgtcatggaggccaacttacccggtgtcctgctgagg
gtgtgcgtgcacctgaagagccgtttccaggagatccgtgatgttgctcgaagcactttg
gtgaagatcatagagacgctgggacatcagtaccttcattatctgctccgagagatgaag
agtgtcctagtgaagggctatcaggtccatgtgctgaccttcaccttgtaccatttactc
tccatcctgagtccgtccttgaccggaggagatctcgatccgtgcatggacatgctcatc
acgatctttaacaacgagctgtttggggacgttgctgaggaaaaggacatcaaaggaatc
gtttccaaagtgatggaggcccgtcacaacaagagcttcgactcgtatgagttaatggca
cggttttgcagtcaagagcgcatcgttcacctcatcatacccctcaaggagatactggag
aacacagtcagtttaaaggtgtccaagcgagtgcacgccgtgttcaagagaatcgtggct
ggtcttctgctgaataagagcatgagtcctcagtccatccttctgctcagccacggcctc
gtgagccaaagtcttccgctcatcaccagcaaaaacaaggagaagatccttccgcctcca
gaccctcgactgcctccgccgagctgcttgctgctgccgcccacccccaagaggggcgga
gtcagagccgccattaatagcaaaaccaacacgcacatcctggtggaaacgggtcttagc
ttgctctactgcagtctgaagacgtcaaaggtgaactcgtctgtggtgtcggtgaaggag
atgttggatccgttcgtgtctctccttctggactgtcttagctcgatgcacgtaaaggtc
attacagaagcccttcaggccttcgtttggatcctgaattttcctctgcccgccgtcgag
cagaatttcgatcagctgtccaaacagctcttcattctgctgaaggactacgccaaagca
ggggccgctcgcggcgagaacttcgcactggttcaaaactgctttaaggctataacagtt
ttggtgaagagtgtgaagcagcgtatatcagaaacacagctgcaggtgcttctgggatac
gcagaagaggacatttatgataactctcgacaggccaccgcatttggtctcctgcgggcg
attctctccagaaaactggtggtgccggaaatggaggacgtgatgaagaaggtggccaag
ctctccatcaacggggctaatgaacaggtccgcatgcgatgcagacagatatacttgagg
tacctgatggactatccactggggaagaaactgaagaatcattttgactttatagtcgct
cagctcagttatgaatatgataccggcaggcagtctgcccttgagatgctggctttcatt
ttccagacattccctcagaatctcttgctggagcactgtggtctgttctttgtgccgttg
tcgctggtaatcctgaacgacgattcggggtcttgtaagaaaatggccaccctggcagtc
aagtcactgttgagaaagttggatttgcagcatcagaattccatgtttaccttggtcaac
aactggctaacaggcgagaagatggctctacggcgactgggaactcagatgtgtgggctg
tttgcagaagtggaaggagacaagttcaaccgaagacttgaaggcctgatacccctgata
gagagagagatccacacctccaactttgaggatattgaggaagaggaggacgagaaggct
gcggaccgactgttgttctgttaccttactcttatcgtcaaactcatcaaagattgcggc
tttctggagctcccgaaacctgcagacctgctcgaaaacacctggggtcatattgattca
catctgcggtaccctcactcttgggtttggctgacagcttcacagatctttggtttgctg
tttgctgctcataaaccggaggatctggtgacgctgtggagctcacaggacaccacacag
aaaaacacgcagcctgtggcctctgtttttctctttaacaacttggatcagaagatgaga
gagctggccttatctttctgttaccaactacagtcaaattttctagatattgcttccggg
gagcaggtggtaaagaacttgctctacgtggccaaggtgatctacctcatctcaccagat
tctgatactgtaacccaaactgaggagcaagaggaggtgaaaggtattgaagagggtgac
gcagaggagaataaagatgatgatgaagagatggataaggagcatcaagaagtgcaagag
cttgaggagcaacagaatgagaacaggcgtccgactctcctctgggttataaagaagctt
tcattgttggccaaaagagaagcagctaacacacctaaagtgcctttgaagagaacttgt
gtgtttaagtttttgggagcaatagctgtggatctcggcaaggatcggctcaggccttat
ctgaccacgattattgctcctctctacagagagctggacagcacatatgcagaccaagat
cccacactaaaaaacctggctcaggaattgattgagttgttgaagaaactggttggtctg
gagcgtttctcattggcttttgctgccgtgcagaaagaggcaactcggagacgagcttcc
cgcaagaaacaaaaggccatgcaggctgttgtcaagcccgacattgcagccaaaaagaag
attaagaagcaactgaagaaaactgagaccaaaaagaggaaaattcaagctgtgcgttca
ggacatacagcaaagaaacctaaaagcagcacgctgagggacttggccataatgaagtga
DBGET
integrated database retrieval system
