Triplophysa rosa: 130547685
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Entry
130547685 CDS
T09216
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
tros
Triplophysa rosa
Pathway
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130547685 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130547685 (lamb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
130547685
NCBI-ProteinID:
XP_057179856
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Position
LG24:13169142..13201566
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AA seq
1772 aa
AA seq
DB search
MWTFRIAALTTFIGLHALAQFPNHNDKCTEGSCYPATGDLLIGRAHLLTASSTCGLNEPE
TFCIVSHLQDDKKCFECDSRQMYNEFTNPNSHTIEKVVTGFAPNRLKTWWQSQNGVENVT
IQLDLVAEFHFTHIIMTFKTFRPAAMVIERSADFGVSWQVYRYYAYDCADSFPHIPQAPI
RKVDDVICDSRYSDIEPSTEGEVIFRALDPAFVIPDPYSPHIQNLLKITNLRIRMTKLHT
LGDNLFDDREEVREKYYYAIYDMVVRGNCFCYGHASECAPVGNEAGVEGMVHGNCVCKHH
TSGLNCEECEDFYQDLPWRPAVGRKTNACKKCECNHHSYSCHFDMAVYHSSGNISGGVCD
DCQHNTEGQWCQTCKPFYFQHPDRDIRDPNICKPCDCDPRGSLNGGICDSATDVLEDMIA
GQCHCKPNVEGERCDHCKKGHYGLSDDPLGCLPCSCNPLGTLSAGGPCDTETGSCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDVGGALNNNCFPETGQCVCKEHMFGRRCDQVH
SGYYFAGLDHYTFEAEDASFGPGVRLVERPLPVDRKPTWTGPGFVKVPEGETLRFNIYNL
PQSMEYNFMIRYEPQLPDEWEQVLMMVERPDAGYPSALCTSTYSDKQSISLHPGSRYAVL
SSPVCLEKGQNYTVKFNFPQYSSYSYHSSPHTLIDSIVLLPVVQDLDLFSGGVQQQENWE
MFQKYRCLERSQSVVQIPMTDICRDYIYSISALMHNKALECKCDPRGSLSSVCDPSSGQC
QCRPNVSGRNCDTCAPATFLFGPSGCRPCECDPLGSQNPFCHPTTGQCLCVPGAYGRQCA
NCKPNHWGFPQCQPCFCNGHSEQCHPRTGECLDCRGYTTGIHCERCASGYHGSALLGSSE
PCRPCLCPDGPGSGRQFAESCYQNRNSLQMICVCSSGYKGSRCDECAPGYYGNPQVPGGQ
CSPCECNSNINMEDPESCDARTGVCLKCLFHTDGDVCQYCSHGYYGDAHTQNCRKCMCNP
MGTSRHSCADGLCDCDRINGQCQCLPGVEGQQCDRCVPDTWNINSGKGCQPCQCHPEHSY
STSCDLLSGRCSCKPGFGGRTCDECRDLFWGDPEVKCYVCDCDPRGIATQQCDKMSGECV
CIEGVSGRMCDSCGRGYVGTFPQCEPCHKCFRDWDTNVGELTNQTQRLMDSVEELKDTGL
TSPYKDTISSLDDGIKQLRQILDDDKIHQTLKHTQSLRQQANEMAPLLRGSMDRSVLDLE
QISANQQKAMENLNSLTEEAQNLQETSRDKEQQVLNIKHSDPRGAMDSIREYYRESSGAN
FIASQAASDPDSIVQQSAQLRGAANARLDATKKEFNLKHQLHVQRMDKITSDLDSKDLSE
LSQQVCGGPPGPDGCADCGGLGCVNEEGASQCGGTECETLVTQSQEALKRVKNLDQEILH
NLREVDKLNKKVSDARGRADEAKISSQNVSLRANQSKARVEQTNNELRDLIQQIRDFLTK
TTDLKRIEEVVDEVMKLSLPVSSGALKDLTTEIRDHVARLTQVDDILTETAEHARTAETL
LKQAQAANETTTALKQAADEIKETLDDTAHAQLAANERMKEVESDMNVTRHQINAVQSIT
ETSEFKLSTSTQRFLDLERGVAELRKKTQETSNNAEHIQKQAEDISEDVERTERDFDSLV
QPKYALVSGLIEQNGAVVYDARQRSEKLRQEAQDLLIDATNKLQRLRELERSFEGNQQTL
VIKAEELDRLESEARNVLQELNQKVAIFSTCA
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgtggacattcaggattgcagctctgaccacatttattggtttgcacgccctggcacaa
tttcccaatcacaatgataagtgtactgaggggagctgttaccccgctacgggtgatctg
ctgatcgggagagcacatctacttacagcctcatccacctgtggactgaatgagccagag
acattctgcatcgtgagccatttgcaggacgataagaaatgtttcgaatgcgattctcga
cagatgtacaatgagttcaccaatcccaacagccacactattgagaaagtggttacaggg
tttgctcctaaccgtcttaaaacctggtggcagtcccagaacggagttgaaaatgtgacc
attcagctggatttggtggccgaattccacttcacacacatcatcatgacctttaagacc
tttcggcctgccgctatggtgattgagcgttcggcagattttggcgtgagctggcaggta
taccggtactatgcatacgactgcgcggactcatttccgcacatccctcaggcgccaatc
agaaaagtggatgatgtcatttgtgacagccgttactctgacattgagccgtcgacggaa
ggagaggttattttcagggcacttgatcctgcatttgtgattcccgacccttatagccca
catatccagaatctattaaagatcacaaacctgcgcatacggatgacaaagttacacact
cttggtgataatctgttcgatgatcgagaggaggtgcgagagaaatattattatgctatc
tacgacatggtcgtccgtggcaactgtttctgttacggtcatgcctctgagtgtgcgcca
gttggcaatgaggcaggagtcgagggtatggttcatggtaattgtgtgtgtaaacaccac
acttctggactgaactgtgaggagtgtgaggacttttatcaagatctgccctggagacca
gcagtgggccgcaaaacaaacgcatgcaagaaatgtgagtgtaaccatcactcgtattcc
tgtcactttgacatggcagtgtatcattcatctggtaacataagtggaggtgtgtgtgat
gattgtcaacacaacacagaaggccaatggtgtcagacctgcaaaccattctatttccag
caccctgacagagacatcagagaccccaacatctgtaaaccttgtgactgtgaccccagg
ggctctctaaacggaggcatatgtgacagcgctacagatgtactggaagatatgattgct
ggacagtgtcactgcaaacctaatgttgaaggagaacgctgtgaccactgtaaaaaggga
cattacggcctcagtgatgacccactgggatgtctgccgtgcagctgtaatcctctgggc
acactctcagcaggaggtccctgtgatacagagacaggaagctgttattgcaaacgtctt
gtcaccggacgaaactgtgaccagtgtttgcctcagcactggggtctcagtaacgatatg
gatggctgcagaccatgtgactgtgatgtgggcggggctttgaataataattgttttcca
gagacaggacagtgcgtatgtaaggaacacatgtttggcaggcgttgtgaccaggtgcac
tctgggtactatttcgcaggactggaccactacacttttgaagctgaggatgcatctttc
ggaccgggcgtgagattggttgaaagacctttacctgtggatcgtaagcccacctggaca
ggtccaggatttgtaaaagtaccagagggcgaaacgctgaggttcaacatttacaatttg
ccacagtctatggaatacaatttcatgatccgctatgaaccacagttgcctgatgaatgg
gagcaagtattgatgatggtggagcggcccgacgctggttacccatcagctctctgcact
tctacttacagtgataagcaaagcatttcactgcatcctggatccagatatgcggttctt
tctagtccagtgtgtttggagaagggtcagaactacactgtgaaatttaactttccacag
tactcatcatacagttatcactcctctcctcacacacttattgattcaatagtgctgctg
ccagtggtgcaagatctggatctgttttctggaggagtccagcagcaagagaactgggaa
atgtttcagaagtaccgatgtttggaacgcagccaaagtgttgttcaaatccccatgacg
gatatttgtagagactacatctacagcatatctgcgctaatgcacaataaagctctggaa
tgtaaatgtgacccacgtggttctctgagctctgtttgcgaccccagcagtggccagtgc
cagtgtcgacccaatgtttcaggcaggaactgtgacacctgtgctcctgcgaccttcttg
tttggaccttcaggatgcagaccatgtgaatgtgacccgctgggttctcagaacccattc
tgccaccccaccactgggcagtgtttgtgtgtgccaggggcatatgggcgccagtgtgcc
aactgtaaacccaaccactggggtttccctcagtgccaaccctgcttctgtaacgggcac
agcgagcagtgccacccgcgtacaggcgagtgtctggactgtaggggctacaccactggc
attcattgtgagagatgtgcgagtggttaccacggcagtgctttgcttggctcatctgag
ccatgtcggccctgtttgtgccctgacggaccaggcagtggcaggcagtttgctgagagc
tgttaccaaaatcgcaactctcttcaaatgatctgtgtatgtagctcaggctacaaaggg
tctaggtgtgacgaatgcgctcctggttactatggtaaccctcaggtgccaggtggccag
tgcagtccatgtgaatgtaacagtaatattaacatggaggacccagaatcttgtgatgcc
cgcactggtgtctgtctcaaatgcctgtttcacactgacggtgatgtgtgccagtattgt
agtcatggttactatggagacgcccatacacagaactgcagaaagtgtatgtgcaacccc
atgggcacttcgagacatagctgtgccgacggtctgtgcgattgtgacaggatcaacggg
cagtgccagtgcttacctggcgtagagggtcagcagtgtgaccgctgtgtaccagacaca
tggaacatcaacagtggaaaaggatgccaaccctgccagtgccaccccgaacactcctat
agtacatcctgtgacctgctgtctggtcggtgttcgtgtaagcccggttttggaggcagg
acatgtgatgagtgtagagacctattttggggcgatcctgaggtcaaatgctacgtatgt
gactgtgacccacgaggcattgccactcaacagtgtgataagatgtctggagaatgcgtg
tgcatagagggagtgtccgggcgaatgtgtgactcctgtgggcgtggctacgtggggacc
ttccctcagtgtgagccgtgtcacaagtgttttcgtgactgggacactaacgtgggagaa
ctgaccaatcaaacacagaggctgatggactcggtagaggagctgaaagacacgggcttg
acgtcgccttataaagatacaatatcaagtctggatgatgggataaaacagctcagacag
atactggacgatgataagattcatcaaactctgaaacacacgcagagtctacgtcagcaa
gctaatgagatggcaccacttttgcgaggatccatggaccgatccgtattagatctggag
cagatatctgccaatcaacagaaggccatggagaatctgaacagtcttactgaggaggcc
cagaacctacaggagacctccagagacaaagagcagcaggttctgaacataaaacattca
gaccccagaggtgcgatggacagcatcagagaatattacagggaatcttcaggggcgaat
tttattgccagtcaagctgcatctgatccagacagtatagtgcaacagtctgctcagcta
cggggtgccgcaaatgcaagactggatgcaaccaagaaagagtttaacctgaaacatcag
ctgcatgtacagaggatggacaaaataacatctgatctggactccaaagatctttcagaa
ctcagccagcaggtgtgcggaggtccaccaggtccggacggttgcgctgactgtggtggt
ctggggtgtgttaacgaggaaggtgcgtcccagtgtggggggacagaatgtgagacatta
gtgacccaatcccaagaggccttgaaaagagtcaaaaaccttgaccaagagatccttcac
aatttaagagaagtagacaagctaaacaagaaggtgtcagatgctcgaggtcgtgcggat
gaggccaaaatcagctctcagaatgtgtcactgagagccaatcagagtaaagcacgagtg
gaacagactaataatgagctcagagacctcattcagcaaattcgagacttccttacaaag
acaacagatctgaagcgtatagaggaagtagttgatgaagtgatgaaactgagtttgccg
gtgtcatccggagcactgaaagatctgaccacagagatccgtgaccatgtggccagactg
acccaggtggatgatatcctgaccgagactgcagaacacgcccgcactgctgagactctc
ctgaaacaagcacaggctgccaatgagacaaccacagctctgaaacaggccgctgatgaa
ataaaggaaactctagatgatactgcacatgcacagttggcagccaatgaaagaatgaag
gaagttgagagcgatatgaacgtcacaagacatcaaatcaatgctgtacaatctataact
gaaacgagcgagttcaaattgagcaccagcacacaaagattcttggatcttgaaagagga
gtggctgaacttcgaaagaaaactcaagagacgtccaacaacgcagagcacatccagaaa
caggctgaagacatcagcgaagacgttgagagaactgaacgggactttgactcacttgtt
caacctaagtatgcactggtgagtggtctgatcgagcagaacggtgcggttgtgtatgat
gcacgtcagaggtctgagaaactcagacaggaggcacaagatttactaatagatgccacc
aacaaactacagagactaagagagctggagagatcattcgaaggaaaccagcaaaccctc
gtgataaaagcagaggaactcgacagactggagagtgaagccagaaatgttcttcaggaa
ctcaatcagaaggttgccatctttagcacctgcgcctaa
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integrated database retrieval system