Triplophysa rosa: 130547872
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Entry
130547872 CDS
T09216
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130547872
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130547872
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
130547872
NCBI-ProteinID:
XP_057180201
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Position
LG24:complement(297164..303728)
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AA seq
800 aa
AA seq
DB search
MGVSELWSILDPVRQCVPLYSLAGMTLAVDLSLWVCEAQHVQGMMGKVTKPQLRNLFFRM
SSLTLMGAKLVFVMEGDAPKLKAETMSKRTEMRFGKVQSKPAAVKTTGRGRFKAVLRECA
EMLDCLGVPWVTAAGEAEAMCAFLDWQGVVDGCITNDGDAFLYGARTVYRNFNMNTKDPQ
VDCYQMSRVKAELGLCRETLVGLAIFLGCDYIPKGVAGVGKEQTLKLIHNLKGQTLLQKF
SEWESDRSERSEVTVKKVTHCLVCRHPGSAKSHERSGCVFCKSDRFCSPQDYDSRCPCEW
HRIEHTRQASSIEANIRKKTLACERFPFTEIIDEFLVTKDKPAPPFRRRKPNLLLMQNFA
LDKMDWPKHYSSEKVLVLMTYTELMNKKHNRDTAAHIQPIRIYKARVRNGVNCFEVIWKK
PDHYVFAEGCDEQTEVRTVEEESLFTLAYPHIVQDFNRERAEAQENKTKKKKPKAKEEKP
GDSHDVMSDLFAQMSLQTAADSKHSDSGVQKPSSDVIMNPTQSKPPETPQNPASPTSPAH
NSVSALIGQLQLSSVDWDSSSFMASPSQQSPSNKTELRSAGDGTDLTVALVSGHPESPQR
ALERSLKERLVVKNVVKSHVSIDGVKKTQKPSGSESLKADSNPSAQSKVPLCPKTQAKVT
KPSTDLTDLQTVTAKPLSSSHLKPSVPPERKPHSVCVRLDSFSDAENRPRSQKHKIKVTS
QPQRPIKTSSTHQSRPQKLSSNDQLSAVNTKTPEKHTAIIRSTHLHHVKMDDDEEEEEEE
EDSVDSPLPLAERLKMRFAK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgtcagagctgtggtctatactggatccggtccggcagtgtgttcctctctac
agtctggcaggaatgacgctggctgtggatctcagcctgtgggtctgtgaagcccaacac
gtccagggcatgatgggaaaagtcaccaaaccacaactaaggaatctgtttttccgcatg
tcctctctcactctgatgggtgcgaagctggtgtttgtgatggaaggagacgctcccaaa
cttaaagcagagaccatgagcaaacgcacggagatgagattcgggaaggtgcagtccaaa
ccagcagctgtcaaaaccaccggcaggggccgattcaaggccgttctgagagagtgtgca
gagatgttggattgtctgggtgtgccgtgggtgacagcggcaggggaagcggaggccatg
tgcgccttcctggactggcagggagtcgtggacggatgcatcactaatgatggagatgct
ttcctgtacggcgctcggacggtttacagaaacttcaacatgaacacaaaggatcctcag
gtggactgctatcagatgtctcgggttaaagcagagcttgggttatgcagagagactctc
gtgggtctggccattttcctgggctgtgattatatccccaagggtgttgcaggtgtagga
aaagaacaaacgctgaaactgatacacaatctgaaaggacaaactctgcttcagaagttc
agtgagtgggagtcagaccgctctgaaaggtcagaggtcacggtgaagaaggtcactcac
tgtctggtgtgccgtcatcctggctctgctaagtctcacgagcgcagcggctgtgtgttt
tgtaagagcgatcgcttctgctcacctcaggattatgactctcggtgtccgtgtgaatgg
catcgcatcgaacacacccgccaggcgtcctccatcgaagccaacatcagaaagaagact
ctggcgtgtgagcggtttccgttcacagagatcatcgatgagttcttggtgacgaaggac
aaacccgcaccgcccttccggaggagaaaacccaacctgctgctgatgcagaactttgct
ctggacaagatggactggcccaaacactacagcagcgagaaggttctggtgctcatgacc
tacacagaactcatgaacaagaaacacaacagagacacggccgctcacattcagcccata
agaatctataaagcacgagtcaggaacggagtcaactgctttgaagtgatctggaagaaa
ccagatcattatgtgtttgctgagggctgtgatgagcagacagaggtgaggaccgttgag
gaagaatctctctttactctggcgtatcctcacatcgtccaggacttcaacagagagaga
gctgaagcgcaagagaacaaaacaaagaaaaagaagccaaaagcaaaggaagagaagccg
ggagattctcatgacgtcatgtccgatctctttgctcagatgtctttgcaaacggcggca
gattcaaaacactcagactctggtgtacagaaaccctccagtgatgtcatcatgaaccca
acacagagcaaacctcccgagaccccacagaatccagcctccccgacctctccggctcac
aattctgtctctgctctgattggccagctgcagctcagcagtgtagattgggattcttca
tccttcatggcatctccatcccagcagtctccgagcaataagactgagctcagatcagca
ggagacggcactgatctcactgttgctctggtctctggtcatccggagtcaccgcagcgg
gcgctcgagaggtctcttaaggagcggcttgttgtgaaaaatgttgtgaagtctcatgtg
tcgatagatggtgtgaagaagacacaaaagcccagcggatcagagagtctcaaagcagat
tcaaacccatctgcgcagtctaaagttccgctgtgtccaaaaacacaagcaaaggtcacc
aaaccatctacagacctgacagatctacagaccgtcacagctaaacccctgagctcttca
catctgaaacccagcgtcccgcccgagagaaaaccgcacagcgtgtgtgtgcggcttgat
tcattcagtgacgcagagaatcgacccagatcacagaaacacaaaatcaaggtcacgtcc
caaccacagagacccatcaaaaccagctcaacccatcagtccagaccacagaaattatcc
agtaatgaccagctgagtgctgtgaacactaaaactccagagaaacacaccgccatcatc
cgatccactcacctgcatcatgtgaagatggatgatgatgaggaggaggaggaggaggag
gaggattctgtggacagtcctctacctctcgctgaaagactcaaaatgagatttgcaaag
tga
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