Triplophysa rosa: 130547880
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Entry
130547880 CDS
T09216
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
tros
Triplophysa rosa
Pathway
tros03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130547880 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130547880 (arid2)
03021 Transcription machinery [BR:
tros03021
]
130547880 (arid2)
03036 Chromosome and associated proteins [BR:
tros03036
]
130547880 (arid2)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
ARID
130547880 (arid2)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130547880 (arid2)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
130547880 (arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
130547880
NCBI-ProteinID:
XP_057180212
LinkDB
All DBs
Position
LG24:3887623..3902222
Genome browser
AA seq
1650 aa
AA seq
DB search
MANSTGKNLPEQRRKGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLSALYVRVVSLGGF
AKVSDKNQWAELGEDFHFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEEDDEEQPGNPKP
SLPIGAIPTSYNYQQHTVSDYLRQSYGLSTEFVPPSDYNKLVLSLLSGLPNEVDFAINVG
TLLSNESKHAMQLEKDPKLITLLLAHAGVFDDSLGSFSAVFGTDWREKTSRDFVKFWKEV
IEDNEVKDLISDKSCTPQNGSETRHVCTPLFHPLRNVGIGDMEGQRVLQVAMILRNLSFE
ETNIKLLAANRTCLRFLLLCAHCTFIQLRQLGLDTLGNVTGELQLDPVDFRTTHTMFHTI
TKCLLSRDRFLKMRAMEILGNLSKAEDNGVLICEYVDQESYREVIALLTLPDIMLVISAL
EVLYQLTELGEVTCSKIATVDRSIDLLVRLVSVDLQTFGPDALTAVKLIEHQASSSQVSE
VRPQLVESVPSPTQGTPGSVNRVAVQPTPPPGIVEADGEKFAAQWLNAHFEVHLESSVSR
SEMYSEYLATCSKMARGAVLTSNNFYKCLRTLFPNHTVKRVEDSRLSGQAQIHVVGLRKR
SIPLPVQLYYQQQQQHQASPTVVPKPEVPTESPQPQSVLVRAPSLTAGQAAPQVALTMHG
TPSAPAPAPTVPRLLINPPGHAALPACPPAIAPVPPRPNDILTTAMIQSSILTSSAAPTV
PNHNTVTTASPSQQPLLHHAPVTLIQQGPPQGHIFTGQMQGVCPSVGQQHLPAPQVQQGA
PSQEAVVLAPTQYVSAPCTSFLAGGQVVTVAGVQSTHGPRVGFQNIAPKPAPQAQSLQPQ
QQQQLQQQQSLVIVSPNPQPTTAFAPAIHQIVLTNPSAMPSAPTIQLPVQPMAPSQPAVP
NTPVPNPTQVQQGQPHTVSQMLSVKRHQQQFQLQPPPPPAQPTSTESSLIKQLLLPKRGP
STPGGKLILPAPQVPTPASSRAPSPQVVYQVSNSGQGTPQPQLNVQLVQSPLQATGAVPI
SILPGQIISTSTPGTLLQAAPSNQVTFTVVPNSGFPAAAAVSQGAPTSIVCQTSLSVSTA
PPTIGLPLTPPLPVAGAACPTPPFRGDKIICQKEEEAKDDTGLHIHERRIEVMENSVADC
SAKTSNGDSAEVDGPAGKLLNGRKFDTSLPPYHSGNSQAEQGMQALNGPATQGGEGPGKQ
MLVDPKKLMLNGVCDFERSDATTGTHPSKNIPNHKASKHMGNGEVLSHQKVHGPLTDTIA
APQQDTAKAEQAERLANGPKIFSHSAEISNGPSVQNSETLGLRQQHPPHNHSPPPPAAVS
NFQHPPGEELLSPPANGTSESRSLKRPLEDGDRGASGIPTKMGVRIVTISDPNNAGNIAT
MVAVPAGADPSTVAKVAIENAVQQRTSVPSPLPENNTQQPVSEQTPPPAEQAAQGTNQSS
QAYATSPEQARKPGQNFKCLWQACRRWFDTPSQVFYHAATHHGSKEAYPGQCLWEGCGPF
PRQRLSFITHLQDKHCSRDALLAGLKLEEQTQGSNTNTSKSPPAAVSSPLPAPRPQKALG
NHPSAALMALRRGSRNLVFRDFTDDKEGPMTKHIRLTAALTLKNIAKYSDCGRKLVRRHE
NHLSVLALSSMEVSTTLAKCLYELTRSLQA
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacggggaaaaatctccccgagcagcggaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccacagcagaggatctccgtttaaaaaggttcccgttgtg
ggtgggaaggagctggacctgagcgctctctatgtgagagttgtttctttagggggcttc
gcaaaggtgtccgacaagaaccagtgggccgaactgggcgaagattttcattttcccagg
agttgctcgaatgctgcttttgttttgaaacagtactaccttcgatatttagagaagtat
gagaaggtgcatcactttggagaggaagatgatgaggagcagccggggaatcccaaacct
tcacttccgatcggtgcaatacccacatcatacaactaccagcaacacactgtatcagac
tatctccgccaaagctatgggctgtcaacagaatttgttcctccatccgattacaacaaa
ctggtgctgtctctcctgtctgggctcccgaatgaggtggactttgccatcaacgtgggc
acgctgctgtccaatgagagcaaacacgccatgcagcttgagaaagatcccaaactcatc
acgctgctgctggcgcatgcgggcgtctttgatgactcgttaggaagcttttctgctgta
tttggaacagactggcgggagaaaacttcacgagactttgtaaagttttggaaagaggtc
attgaagacaacgaagtgaaagatctcatctcagacaagagctgcacaccccaaaacgga
tcagagacgaggcacgtctgcacgcctctcttccacccgctgcgtaacgtgggcatcgga
gacatggagggccagcgggtgttgcaggtcgccatgattttgaggaacttgtcattcgag
gagaccaacataaaactcttggcagctaatcgcacgtgtctgcgcttcctcctactgtgt
gcgcactgcaccttcattcagctgcggcagctgggtctggacacgctcggcaatgtcacg
ggagagcttcagctggatccagttgattttcgaacaacacacacaatgtttcacaccatc
accaaatgtttgctttcacgggatcggtttctcaaaatgagggccatggagatcttggga
aacctcagcaaagcggaagataatggcgttctgatctgcgagtatgtggatcaggagtcg
tatcgagaggtaattgccctcctaactttgccggacatcatgctggttatctcagctctg
gaggttctctatcagctgaccgagctcggggaggtcacatgctctaaaatcgccacagtg
gacagaagcatagatcttttagtgcggctggtgtcagtggacttgcaaacatttggacca
gatgccctgacggcggtaaaactcatcgagcatcaggcatccagcagtcaggtctcagag
gttcgaccgcagcttgtagagagcgttccttctcccacgcaaggcactcctggatctgtg
aacagagtggcggtgcagcccacccctccacctggaattgtagaagcagatggagagaaa
tttgcagctcaatggctaaatgcacattttgaggttcacttggagagctctgtgtctcgc
tctgagatgtactctgaatatctggcgacctgcagtaagatggcgcggggtgctgtgctc
acgtccaacaacttctacaaatgcctgaggacgctgtttcctaatcacacggtgaagcgc
gtggaggactcgcggctgagtgggcaggcacaaatccatgtggttggtctgcggaagagg
tcgattcctcttcctgttcagctttattatcagcagcaacaacaacatcaggccagtcct
acagtagttcccaaacctgaagtccccacagaatctcctcagccccagtcagtgctcgtc
cgggcaccaagccttactgccggccaggcagcaccacaggtggccttgaccatgcatggt
actcccagtgctcctgcgccagccccgactgttccacggctcctgataaacccgccagga
catgcggcgcttcccgcctgccctccggccattgccccagtccccccacgacccaatgac
attctgacaacagccatgatccagagctccatcctcacatcgtctgctgcacctacggtt
ccaaaccacaacactgtcaccactgcctctccttcccagcagcccttgctccaccacgct
cctgttacactgatccaacaggggccaccccagggacacatatttacagggcagatgcaa
ggtgtttgtccttcagtaggccagcaacacctgcctgcccctcaagtgcagcaaggtgcc
ccatcccaggaggccgtggtacttgcgcccactcaatatgtgagcgcaccttgcacgtcg
tttttggcaggcgggcaagtggttacggtcgcaggtgtacagagcactcatgggcctcgt
gttggatttcaaaacatcgcccccaaacctgcaccacaagctcagtcgctgcaacctcag
cagcagcaacaactacaacagcagcaaagtctagtcatcgtcagtccaaatccacaacct
accactgcttttgctccagctattcatcaaattgtattgaccaacccgtcggccatgcct
agtgctccaactattcagctcccagtgcaacccatggcaccttcacagcctgctgttcca
aacacaccggtccctaaccccacacaggtccagcagggtcagccacacacagtcagccaa
atgctctccgtgaagcgtcatcagcaacagtttcaacttcagccgccacctccacctgcc
cagcctacctccacagaatcgagtctgatcaaacagttactgcttccaaaacgtggtcct
tccacacctggaggaaaactcatactccctgctccccaggtccccacccctgctagcagc
agggcgcccagccctcaagtcgtataccaggtatccaacagtggtcaggggacacctcag
ccacagttaaatgtgcagctcgtgcagagtccgttgcaggctaccggtgctgtccccatc
tccatcctacccgggcagatcatttccacctctacccctggcacccttctgcaggcggca
cccagcaaccaagttactttcacagtagtgccaaactctggcttccccgctgcagcagct
gtcagccagggagcgccgacttctattgtatgtcagaccagcctgtctgtcagcacagcc
ccgcccacaattggactgccattgactccgcctctgccagttgcaggagccgcttgcccc
acgccacctttccgaggtgacaagatcatctgccaaaaggaggaggaggccaaggatgac
acggggcttcacatccacgagcgtaggattgaggtcatggagaactccgttgctgattgc
tcagccaaaaccagcaatggggactcggcggaggtggacggacctgcgggcaagctgctc
aacgggaggaaatttgacacgagtctacctccataccactcagggaacagccaggcagag
cagggcatgcaggcgctaaacggccctgccacacagggtggagaaggccctgggaagcag
atgttggtggaccctaaaaagctcatgttgaatggggtctgtgactttgaaagatccgat
gccactactggtacccatccaagcaaaaacattccaaatcataaggcttccaaacacatg
gggaacggggaggtgctgtcacatcagaaagtgcacgggccccttacggacactatcgct
gctcctcagcaggacactgccaaagcagagcaggcagaacgcctggccaacgggcccaag
atcttcagccacagtgctgagatctccaacggcccctcggtccagaactctgaaacactg
ggcctgaggcaacagcacccacctcataaccactccccacctccacccgcagcggtatcc
aactttcagcacccacctggagaggagctgctctcgcctcctgctaacggcacctctgaa
agccggtcgctgaagagaccgctggaggatggggatagaggtgcctctggaatcccaacg
aaaatgggcgtacggatagtgaccatcagtgaccccaacaatgctggcaacatcgccacc
atggtggccgtgccagcaggcgcagatccaagcacagtagcaaaagtagcaatagagaat
gcagtgcagcagagaacaagcgtgccctctccgcttcctgaaaacaacactcagcagcct
gtatcagagcagactcctcccccagcagagcaggccgcacagggaaccaaccagagttca
caagcttacgccacctctccagagcaagcacgtaaacctggacagaactttaaatgtttg
tggcaggcatgcagacgatggtttgacacgccgtcacaagtgttctaccatgcagctact
catcatggcagtaaagaagcgtacccaggccagtgcctctgggagggatgtggcccgttt
cctcgtcaaagactatccttcattacacacctgcaggataagcattgttcgagggatgcg
ctcttagctggactcaaactggaggagcaaacacaaggcagcaacaccaacacttccaag
tctcctccagcagcggtcagcagtcctctgcccgctcccagaccgcagaaagcgctcggc
aatcaccccagcgcagcgctgatggctctacgcaggggctcgcgaaatctcgtgttcagg
gacttcacagatgataaggagggaccaatgaccaaacacatcagattaactgctgcctta
actttaaagaacatcgcaaagtactctgattgtggacggaagttggtgaggcggcatgaa
aatcatctgtctgtgctggctctgagcagtatggaggtctccaccacgctcgctaaatgc
ctttacgaactgacgcgctctctgcaggcctga
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integrated database retrieval system
