Triplophysa rosa: 130548017
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Entry
130548017 CDS
T09216
Symbol
arhgef12b
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tros
Triplophysa rosa
Pathway
tros04270
Vascular smooth muscle contraction
tros04625
C-type lectin receptor signaling pathway
tros04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130548017 (arhgef12b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130548017 (arhgef12b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
130548017 (arhgef12b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130548017 (arhgef12b)
Membrane trafficking [BR:
tros04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130548017 (arhgef12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
130548017
NCBI-ProteinID:
XP_057180416
LinkDB
All DBs
Position
LG2:complement(6699637..6763542)
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AA seq
1409 aa
AA seq
DB search
MSGTQYTLAERFPKKASRTGSILSKDHPPDKKPKSDNASVPPSHEFDPTGLVQRCVIIQK
DENGFGLTVSGDNPVFVQLVKEDGAAMHAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLAQIPLSDGEGEDGSLSPLTSPHSPGPIGPDRPSSSPSPSERKPVPL
PVWAMEDYSRNPTTKLLKEIQEAKKHIPQFQDQLNKAAGQDGSLSPRPSEGELEDGGGDL
NRPPSWQANAGMESTWTNSTPVTPSPVPESPCQRETPCHSPKTTPRDSLNPCPSPDAEDT
PDLDSQSNMGSPSHRLPPQIIGAEDDDFDTEQEQMNGQCSCFQSIELLKSRPAHLAAFIH
HVVSQFDPAPLLCYLHAELYKQSSSKETRRTLMETFLIDKTASLKVAVPESIIADLERTA
HLNNTERKKQEPISEDIHRQYVQQLQDSLLPDIQKNLEDFRHKRSMGLTLAEVELTRLDT
ERMRDRVALEKERSCAEHIISLIEQVLLTPQATEEDKCSTIQFVILSYMKQLGVKVKGWS
ESRGLEHKPKLINLFPKIKKSIKAEKDGIEKKQRKIFLPRRPSRTDTFLPSRGSEPKQRL
QKPLLPFGVAEQADASSPPVRGSQSSDGSDGTVPSVMSPPYSASAVQGTDGISRESETGA
VPSSALPRLGDGINAGDVQDSTTHFDFSPCTLEHLHEEEPEIDKTQDAGTPRPDRRRMEL
LSTGDVPSEDDQGAEAELEYPNWQTLVSRDVLSTLTPQEIKRQEVINELFYTERAHVRML
KVLDNVFYQPLTREAILPPADIKTIFTNLEEIVQLHVSLTEQMAAVRKKNEAAVVDSIGD
ELLSWFSGEEEEKIKRAAGMYCSNQPFALELIKSKQKKDQRFNSFIQEAESNRHCRRLQL
KDIIPVETQRLTKYPLLLENIAKYTEDPEERSKVKQAGECCRKILSHVNQEVKEAENKQR
LEDYQRRLDLSSLKQSENPMIAEFKNLDLTKRKMVHEGPLSWKVNKDKTIELYTLLLEDI
LVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLNTVMVRSVATDNRSFFVLSMSDNG
AQIYELMAQTVSEQRTWQCLITQRADCMKTKLHNIIPLPQTDGEREEVELINSSVQKLNK
DSESVSLGSIQPQEKDNTEVTQTPPASTNPFETKSDEEEEENTLQDQGEDDEAFVVADLT
DRLTLLKQRCRLGIAIDEDEAEAFDLQPLRADEALRTLAALRQLLIKHISSQGDTDRDTE
RGEIQEYEQRTDSQQNGSEKPERDETRRQNPPELPSADTGFFETSEDCSSYMVLEGYGGS
GESGTEDDVQGSIGEPVAGGDSGIDLKKLLSSSSQSSGGPNINRQIMTHLRLLQANLQHL
KEIEIKYNQVRQRISKEAATETEENKDKS
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtacacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagtaaggaccatccccccgacaaaaagcctaagagcgacaatgcatcagtc
cccccctcgcatgaatttgaccccacagggcttgtgcagcgttgtgttatcatccagaaa
gatgagaatggctttgggctgacagtgagtggtgataaccctgtgtttgttcagcttgtg
aaagaggatggagctgccatgcatgctggtgttcagactggtgaccggatcataaaggtc
aatgggacgttagtaacacattcgaatcatgtagaagttgtaaagcttataaaatcgggc
tcctatgtggccctgactgtgctggggagaccgccagggctggctcaaatccccctgtcg
gatggtgagggggaggacgggtctctctccccgctcacctcccctcactccccagggccc
attggcccagaccggccctcttcttcccccagcccctccgagcgcaaacccgtccctcta
cctgtatgggccatggaggattacagcaggaaccctacaactaaactactgaaggaaatc
caggaagccaagaagcacattccacagttccaggatcagctgaacaaggccgctggacag
gatggctctttatctccaaggccaagtgaaggagagctagaggatggagggggagatttg
aatcgccccccttcctggcaggccaatgctggaatggagtcaacctggactaacagcacc
cccgtcactcctagtcctgtcccagagagcccatgccaaagagagaccccctgccacagc
ccaaagaccacaccacgtgacagcctcaacccctgcccttcaccagatgctgaagacacg
cctgacttagactctcagtcgaacatggggagcccctcccaccgtctgccccctcagatc
atcggtgctgaggatgatgactttgacacagagcaggaacagatgaatggccagtgtagc
tgttttcagagcatagagctgctgaagtctcggcctgctcacctggcagctttcattcat
catgtggtctctcagtttgatcctgcaccgctgttgtgctacctccacgctgaactttac
aaacagagcagctccaaagagacacgacgcaccctcatggagacattccttatagacaaa
accgctagtttgaaagtggcagtgcctgaatccatcatagcagacttagagcggaccgcc
cacttaaataacactgaacgaaagaagcaggagcccatctcagaggacatccacagacag
tacgtccaacagctgcaggactcgcttctccctgacatccagaaaaaccttgaagacttc
aggcacaagcgcagtatgggtctaacactggccgaagtggagctgacccgactagacact
gagagaatgagagaccgggtggctctagagaaagagcgatcttgtgcagaacacatcatc
tccttgatagagcaagttctgttgacaccgcaggccacggaggaagataagtgtagcaca
attcagtttgtgatactgtcgtatatgaaacagttgggtgttaaagtgaagggctggagt
gagtcgcgagggctggagcacaagcctaagctaataaaccttttccctaagataaagaag
agcataaaagcggagaaagacggaatcgagaaaaaacagcgaaaaatctttcttccgaga
cggccgagcaggacagacactttcttaccgagcaggggttcagagccaaagcagcgtctt
cagaagcctctgctgccgttcggtgttgcggaacaggcagatgcgtcatcccctcccgtc
cggggcagtcagtcaagcgatggttcagatggcaccgttccctcggtcatgtcacctcct
tacagtgcctcagcggtacagggcacagacggcatcagtcgagagtctgagaccggtgca
gttccgtcttcagcactgcccagactgggagacggcatcaacgcaggagacgtgcaagac
tcgaccactcactttgacttcagcccctgcaccctagaacatctacacgaggaggagcct
gagatagacaaaacgcaggacgctggcacccccaggcctgacaggagaaggatggagctg
ctgagcaccggagatgtaccgagtgaagatgatcagggtgctgaggcggagctggagtat
cccaactggcagacgctggtgagcagagacgttctgtccacactcacccctcaggaaatc
aagagacaggaggtcatcaacgagttgttctatactgagagagcacatgtcaggatgctg
aaggttctggataacgtgttttatcagccgctgaccagagaggccatcctgccaccagca
gacatcaaaaccatctttaccaatcttgaagagatcgttcagctgcacgtgtccttaaca
gaacaaatggcagccgttcgaaagaagaacgaggcagcggttgttgattcgataggagat
gaactgctgtcctggttcagtggggaggaggaggagaagatcaagagagcagcaggcatg
tactgtagtaaccaacctttcgccctggagctcataaagagcaaacagaagaaagaccag
cgctttaactccttcatacaggaggctgaaagtaaccggcattgccgcaggcttcagtta
aaggacattattcccgtggagacgcagagactcacaaagtatccgcttctgctggagaac
atcgccaaatacacagaggaccctgaagaaagaagtaaagtgaaacaggctggagaatgc
tgtcgaaagattctcagtcacgtcaaccaggaggtgaaggaagccgagaacaaacagagg
ttggaggactaccagaggcgactggacctgtcctccctgaagcagagcgagaaccccatg
attgctgagttcaagaatctggacttgacaaagagaaagatggtgcatgaagggcctcta
tcctggaaagtcaacaaagacaaaactattgagctgtacacactgctgctggaggatatc
ttggtgctacttcaaagacaagatgagaagctgatcttaaagtgccacagtaagaatctg
gcaggcacggcggagaccaaacacatcttcagccccatcatcaaactcaacactgtaatg
gtgcgctcagtcgccaccgataacaggtcgttctttgtgctgtctatgtctgataatggc
gctcagatctacgagctgatggcccagaccgtgtctgagcagaggacgtggcagtgtcta
atcacacaaagagccgattgcatgaagaccaaactacacaacatcattccattacctcag
actgatggggaacgtgaagaagttgagttaataaactctagcgttcagaaactcaacaaa
gactctgagtctgtttcattggggagtattcagcctcaagaaaaagacaacacagaggtc
acgcaaaccccacccgcaagcaccaacccattcgagaccaaatccgatgaagaggaggaa
gaaaacacgttgcaagatcagggtgaagatgatgaggcattcgtggtggctgatctgaca
gacagactgactttgctgaagcagcgctgcaggctgggcatcgccatagatgaggacgag
gccgaggcctttgaccttcagccgctccgagctgacgaagctctcagaacactggcggca
ctcagacagctgctgatcaaacacatctccagtcagggggacacagacagagatacagag
agaggagagatacaggaatatgagcagaggacggactctcagcagaacggctcagagaaa
ccagagagagacgaaaccagaagacagaaccctccagaactgccatctgcagatacaggc
ttctttgagacgtctgaggattgcagcagttacatggtgctggagggttatggaggttca
ggtgaaagcggcacagaagatgatgtgcaggggagcatcggggagccagtggctggggga
gactcgggcatcgacttgaagaagctcctctcttcttcatcccagagcagcggaggacca
aacatcaacagacagatcatgactcacttacgtctactgcaggccaacctgcagcatctg
aaggaaatagaaatcaagtataaccaagtacgccaaaggatatccaaggaagcagctact
gaaacagaagaaaacaaagataaaagttag
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integrated database retrieval system
