Triplophysa rosa: 130548060
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Entry
130548060 CDS
T09216
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
tros
Triplophysa rosa
Pathway
tros04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
130548060 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130548060 (cald1a)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130548060 (cald1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
130548060
NCBI-ProteinID:
XP_057180495
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Position
LG24:2095441..2133798
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AA seq
602 aa
AA seq
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MDDDFERRRELRRQKREEMRLEAERMANRRSEEDEEEAARERRRRARQERLRSKESEDVP
YQPDKTELNNSHSVTVTETVSSSVVTSSRPEDEDEEEQALQERLAKREERRQRRMMEALD
RQREIESQTSHYGLEESGGGLQHGRSYEAEEEVNSKEAEKEEDIPREEREEVVVEKPRRS
YLRGQESVEETSKLADEGEQSGLPSYSRENEVILNEVADDSAVVLETESENGTADVREEK
REVEREGLTENGLDEAREAESFEKEETELAENDEVLMEDEDVMRKNKQPNGAMCDESPPK
HKKAERTFSRGSLRSTEAPETDEADGEDARLEAERKLEELKRRRDEMESEEFEKMRQKQQ
EAEVELEELKRKREERRKVLEEEERRRKQEEAERKAKDEEEKRRMKEEIEKRRAEAAERR
QKVEDSVDGEAKKPFKCVSPRGSSLKIGERAEFLNRSAQRSSVKASHTPVVSKIDNRLEQ
YTTAVQSNQEVKSPRSAAIDLPMVTDGIRNIKSMWEKGNVFASGGGPASTNKDAAVIKVG
VAGRINDWLNKTPETGKTSGGRPADLKPGDVTSKRNLWENKGSSATKPSREETKSVTNGM
GH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatttcgaacggcgccgggagctcaggagacagaagcgcgaggagatgcgt
ctagaggcagagaggatggcgaaccgaaggagcgaggaggatgaggaggaggccgcccgt
gagcgccggaggagagcacgacaggagagactccgcagtaaagagagcgaggatgtgccg
taccagcctgacaaaacggagctcaacaacagccacagcgtgacagtgaccgagaccgtg
tcctcctccgtggtgacctccagccgaccggaagacgaggacgaggaggagcaggccctg
caggagcgtctggcaaagagagaggagcgcaggcagaggagaatgatggaggcgctggac
agacagagagagatagagagccaaacctctcactacggtctggaggagagcggcggcggc
ctgcagcatgggcggagctatgaggctgaggaggaggtgaacagcaaggaggcggagaaa
gaggaggacattcctagagaggaaagagaggaggtcgtagtggaaaagcctcggaggtct
tacctgaggggacaggaatccgtcgaggaaacttctaaactagctgatgagggcgagcag
agcggcttgccttcttattcccgagaaaatgaggtgattttaaatgaagtggcagatgat
tctgcggttgttttggagacggagtcagaaaatggcactgcggatgtacgggaggaaaag
agagaggttgagagagaggggttgacggagaatggattggatgaggcgagagaggccgaa
agctttgagaaagaagagacggagcttgctgagaatgatgaggttttgatggaggatgaa
gacgtgatgaggaagaacaaacagccaaatggagcgatgtgtgatgagagccctcccaaa
cacaagaaagcagagaggaccttcagccgaggcagcctgcgttctaccgaggcacccgag
acggatgaggcggacggcgaggacgctcgcctggaggccgagagaaagctggaggagctg
aagaggaggcgagatgagatggagagcgaggagttcgagaagatgaggcagaagcagcag
gaggccgaagtggagctggaggagctgaagaggaagagggaggagaggaggaaggtgctg
gaagaggaggagcggaggaggaagcaggaggaggccgagaggaaagccaaagacgaggag
gagaagagacgcatgaaggaggagatcgagaagcggagagccgaggcggccgagaggagg
cagaaggtggaggattcggtggacggagaggccaagaagcctttcaaatgcgtcagcccc
agaggatcatcgctgaagatcggtgaaagagcagagttcctcaacagatcagcacagaga
agctcggtgaaggcgtctcacactcctgtggtgtctaagattgataacagattagagcag
tacaccaccgcagtgcagagcaaccaagaggtgaaatctccccgatcagctgccatagat
cttcctatggtgacggacggtatccgtaacattaagagcatgtgggagaaggggaatgtc
ttcgcctctggcgggggcccggcatccaccaacaaggatgcagctgtgataaaagtgggc
gtggctgggcggatcaacgattggttgaacaaaacaccagagacgggcaagacatcagga
ggaagacccgcggacctgaagcccggtgacgtgaccagcaagcgcaatctatgggaaaac
aaaggttcctctgctactaagccgagcagagaagagaccaaatccgtcaccaacggaatg
ggccattaa
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