Triplophysa rosa: 130548207
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Entry
130548207 CDS
T09216
Symbol
smo
Name
(RefSeq) protein smoothened
KO
K06226
smoothened
Organism
tros
Triplophysa rosa
Pathway
tros04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130548207 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tros04030
]
130548207 (smo)
G protein-coupled receptors [BR:
tros04030
]
Frizzled / Smoothened family
130548207 (smo)
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GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
130548207
NCBI-ProteinID:
XP_057180829
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Position
LG24:6885374..6893812
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AA seq
825 aa
AA seq
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MSSNRLCPIVGGFRMLWIWAASFMAARAVILHTNETIFNDYCKKTTTCEVLKYNTCLGSP
LPYSHTSLVLAEDSETQEEAFEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCENGKVELP
SQHLCQSTRTPCSIVEQERGWPNFLKCEFKDKFPKGCQNEVQKIKFNTSGQCEAPLVKTD
IQASWYKDVEGCGIQCNNPLFTEEEHSDMHSYIAIFGSITLLCTFFTLATFLADWKNSNR
YPAVILFYVNACFFIGSIGWLAQFMEGARKEIVCKSDNTMRLGEPSSTETLSCVIIFVIV
YYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHLVTWSIPFILTVAILAIAEV
DGDSVSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVLITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECAIKNRPSLLVEKINLFSMFGTGIVMSTWVWTKATILIWKRTWCRIIGRSDDEPK
RIKKSKMIAKAFSKRKELQKDPEKELSFSIHTVSHEGPVAGINFDLNEPSMEMSSAWAQH
VTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMIKRKKKKKKRRKEMQ
PTDPLANERNPTYHRREFGSSAVPRLPKLPGHRSLVANLWEQQQRQQQEEQDVLPGAFPE
FRPSCPLPYQERYGGLGYHPSNLCNKPSSLPIANPLTLRNGMQDDSGSFQQSSWQPNGVF
LGQEPSVMDAGRTNVVPRGDGRRGIPIHSRTNLMEAELMDADSDF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaatcgcctatgtcccattgttggaggctttaggatgctttggatctgggca
gccagcttcatggccgcccgggccgttatcttacacacaaatgaaacgatattcaacgac
tattgtaagaaaacgacaacttgcgaagtgctaaaatacaacacatgtctgggttcacct
ttgccttattcgcacacgtctctggttctggctgaagactcagaaactcaagaggaagcc
tttgagaaattggccatgtggtctggcctgagaaacgctcctcgctgttgggctgtgatt
cagccattgctgtgtgccgtgtacatgccgaagtgcgagaacggaaaggtcgaactgccc
agccaacacctgtgccaatctacacgcacaccgtgcagtattgttgagcaggaaagaggc
tggcctaactttctcaagtgtgaattcaaggacaaatttcctaagggttgccagaatgag
gttcagaagatcaagttcaatacatccggacagtgtgaggctcctttggtcaaaactgat
atccaagccagctggtacaaggatgtggagggctgtgggatccagtgtaacaatcccctg
ttcacagaggaggagcactctgacatgcacagctacatcgctatctttggatccatcacc
ctcttatgcaccttctttactctggccacatttcttgccgactggaagaattccaaccgt
taccctgctgtcatcctcttttacgtcaatgcttgttttttcatcggtagtattggatgg
ctcgctcagtttatggaaggagctcgcaaagagattgtgtgcaaaagtgacaacaccatg
cggcttggagagccatcgtccaccgagacgctatcatgtgtgattatattcgtcattgtg
tattattctcttatgtctggggtcatttggtttgttatgctcacctatgcctggcacaca
tcattcaaagccctgggtaccactcatcagcccttgtctggaaaaacatcctatttccac
ctggtcacatggtccattcccttcatactgactgtagccatactggccattgcagaggtg
gatggagattcggttagtggcatttgctttgtcggctataagaactatagataccgtgcc
gggtttgttttggctcccatcggagtggtcctcgtcgttggcggctatttcctaatacgc
ggggttatgacgttgttctctattaagagtaaccatcctgggctactgagtgaaaaagcc
gctagtaaaatcaacgagaccatgctgaggcttggtatatttggattcttggccttcggt
tttgttttaatcacgtttggctgccatttctatgactttttcaatcaggctgagtgggaa
aaaagcttcagggaatatgtcctgtgtgaagctaatgtcactatagctcaccagaccaac
aagccgatccctgagtgtgccatcaagaacaggcccagtctgcttgtagaaaagatcaac
ctcttctccatgttcggcacaggcatcgtcatgagcacgtgggtttggaccaaagctacc
atccttatctggaaacgcacttggtgcagaatcattggacgaagtgatgacgagcccaaa
cgcatcaagaagagtaagatgattgccaaggcgttctcgaagcggaaagagctgcagaag
gatccagagaaagagctgtcctttagcattcacactgtctctcatgaggggcctgtggcc
ggaatcaactttgacctgaatgagccgtcgatggaaatgtcttctgcatgggcccaacat
gtaacaaagatggtggctagaagaggtgcaatcttaccgcaggacatctcagtgacgccc
accggaacacctgttccacccccagaggagagaaacaagctgtggatggtcgaagctgaa
atatctcccgaaatgattaaaagaaagaagaaaaagaaaaagcggagaaaggaaatgcag
ccaacagatcccttagcgaatgaaagaaatcccacctaccatagacgggagtttgggtcc
agcgctgtgccgcgtcttccgaagctgccaggtcaccggagtctggtggctaacctgtgg
gagcagcagcagagacaacagcaagaagaacaagatgtgcttccaggggccttccctgaa
ttccgtccttcttgtcctcttccgtaccaggagaggtacggtggactgggataccatccc
tccaacctatgcaacaaaccctccagccttcccattgccaatcccctgacccttaggaac
ggcatgcaggatgactcgggtagcttccagcaatcgtcgtggcaacctaatggggttttc
cttgggcaggagccttctgtaatggatgctggcaggactaatgttgtgccacgaggagat
ggcaggaggggtattccaatacactccagaaccaatcttatggaggccgagctaatggat
gcagactcagatttttaa
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