Triplophysa rosa: 130548275
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Entry
130548275 CDS
T09216
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130548275 (hps3)
Membrane trafficking [BR:
tros04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
130548275 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
130548275
NCBI-ProteinID:
XP_057180906
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Position
LG25:complement(476477..504633)
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AA seq
1049 aa
AA seq
DB search
MVHVYNCHPFASQHIVSTEQEPGLVCCGGGALFVVCGCRIEAYDVRQDGCPLICRFSSVS
SVRSIRHSGAGDYLVTIEEKNGAMYLRAYTNWRYQAVEKTRVGVRLLGHLLRGASFRGAP
KEQMEIIEIPLFEPPLCMACCPLTGDLLVGCAKSLVVFSLKHQKLSEQLSLLDFERVLIL
HVQGLSPSQVAFCAGFVALQTELEVLVVKLTQQQKNTPDTGHHHVLLPDDIITDAASDED
AEMKKDGFSPLHEQEDFFMFPKHQEMLGSEAQDCGTSFLLEWTGIEVERSEDMSICYVLY
RRFAPDFFQGCSVEETHLHSLQLHPMFTVTQEESIISKGEEPTCMFVFFSLPNTGYMYSL
KDSVELVSTYQYPEKTHQAVLSNQFLYVITRNALQCFTVRCSAVAARVNDPYIDTTMKAC
PPITMEVCALRIQLFIGLKAVCHDGNHIVLLTAADVDNREDVERPARKNTESREHKTLTG
ILVAVGLEPSSTAALENLLSRSLLSRKTSVCKSTEPTDSGHGWNLYVITCVSTLQLYQEI
VEYSKRYEQSSPLSQSCVHLLSEAHLLLRSALLTQQDYEPHLQQAFQESCAHLADCFSRL
DKKDCHLALPYYNISGLSVTDVVQRNMAMCNFSSGYGRGFLFYLKHSLYEGTVEELNEGM
ANKVLEIFSVAEPTELPHVVSNPSMLRANPDCAMTHLRQLDISGTSSITLSLSIASLALR
KGDLHTYRQQMDRHAEMLQVYGFLEEPKLLLHGRGKAVVPTVLAQHLRDTQEGLLVAAVV
ALHENRQIRLEEADFFFQELCKDEIQRAPQLLLDFWEALLVASANESIIQELLFHLVSVY
IDRLTCRDLSGVKALKTADDLINSCCHYGMLYPWVSILTPVQFGIAHDQQDLHKLQSLLC
GPTLEVSSILPLLEKLSDRDNTGLSVHVLCATKLGQHEGSINKLLERCPQAIISYAKHEL
QNEKLCLWWQKLFPELCERIRRTGNDTTILSALRDVLAVVAIELNPLEFLDLLPDDGTAQ
FFLPHLLECSQRNLLIALYQNITCLDVWE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctataactgccacccgttcgcgtctcagcacatcgtgtcgacggagcag
gagcccgggctggtgtgctgcggcggcggggcgctgttcgtggtgtgtggctgcaggatc
gaggcgtatgatgtgcggcaggacgggtgtccgctcatctgccgctttagcagcgtgagc
tccgtgcgcagcatccgccacagcggcgcgggggactatttggtgactattgaagagaag
aatggggcgatgtacctgcgggcctacactaactggaggtaccaggctgttgagaagact
cgtgttggtgtgcgtctgctgggacatctcctgcgtggcgcatctttccgtggagcgccc
aaagagcaaatggagattatagagattcctctgtttgagccaccgctgtgtatggcgtgc
tgccccctcacaggtgatcttctggtgggttgtgccaagagtttggtggtcttcagtcta
aagcatcagaagctgagcgagcagctctctcttttggactttgaaagggttctgattctt
cacgtccagggcctgagcccatcacaggtggcattctgtgctggatttgtggctcttcag
accgagttggaggtactggtggtaaagctcacccaacaacagaagaacacaccagacaca
ggccatcatcacgtgctgttaccagatgacatcatcactgacgctgcttcagatgaggat
gcagagatgaaaaaagatgggttcagtccccttcatgagcaggaggacttcttcatgttt
ccgaagcatcaggagatgttgggcagtgaagctcaggactgtggcacatcttttcttctg
gagtggacgggtatagaggtggagaggtcggaggacatgagcatatgctatgtcttatac
aggaggtttgcacctgatttctttcaaggttgcagcgtagaggagacgcacttgcattcc
ctacagctccaccccatgtttactgttacacaggaggaatccataatttctaaaggagaa
gaacccacctgtatgtttgttttcttctctttgccaaacaccggctacatgtacagttta
aaggactcggtagagcttgtatcaacctaccagtatcctgaaaaaacccatcaggctgtg
cttagcaaccagttcctctatgtcatcaccaggaatgctctgcagtgtttcaccgtcagg
tgtagtgcggtagcggcacgggtgaatgatccctacattgacaccactatgaaggcatgc
ccgcccatcacaatggaggtgtgcgccctgcggatccagctcttcatcggcctgaaggct
gtctgtcacgacgggaatcacattgttctcctgacagctgccgatgtggacaacagagaa
gatgtagagaggccggcccgcaaaaacactgaatcgagagaacacaaaaccctgacaggc
attttagtagctgtaggtctagagccgtcttcgacagcagctctggaaaaccttctgtcc
agatctttactatccagaaagacctccgtctgcaaatccactgaaccgacagacagcggt
catggctggaatctctatgtcatcacgtgtgtgtccacactgcagctctaccaagaaata
gtggaatacagtaagcgatatgagcagtcaagtcctctctctcagagctgtgttcatctg
ctgagtgaagctcatcttctcctgcgttcagcactgctcacacagcaggactatgagcct
cacctgcagcaggcctttcaggagagctgcgctcacttagcagactgttttagcaggttg
gataagaaggattgtcatttggctctgccgtactataacatttccggtctatctgtgact
gatgttgttcagaggaacatggccatgtgcaacttctcgtctggatacggcagaggattt
ctcttctatctcaaacattcactctatgaaggaaccgtggaggagctcaatgagggcatg
gccaataaagtgctggaaatctttagcgtggctgaacccactgagctccctcatgtggtg
agcaacccatccatgctgagagccaatcctgactgtgccatgacccacctgagacagctg
gacatctctggaacctcgtccatcaccctgtctctctctatagcctccctggcactccgc
aagggcgatctacacacatacaggcagcagatggaccgtcatgccgagatgctgcaggtg
tatggcttcctagaggaacccaaactcctgctgcatggcagaggaaaggccgtggtgccc
actgtactggcacaacacctgcgagacacacaggaggggctgctggtggccgcggtcgtg
gcactgcacgagaacagacaaatcagactggaggaggctgactttttctttcaggagctg
tgtaaagatgagattcagagggctcctcagttactgctggatttctgggaagctttgttg
gtagcatctgctaatgagtccatcatacaggagctgctgtttcatctggtgtctgtctac
atcgaccggctcacgtgtcgagatctctcaggtgttaaagccctcaaaacagctgacgac
ctgataaactcttgctgtcattacggaatgttgtatccgtgggtgagcatcctgactccc
gtccagtttggcatcgctcatgaccagcaggacctacacaaactccagtctttactgtgt
ggtccgacgctggaggtatcgtccattctgcctctgctggagaagctgtctgaccgtgat
aacaccggactaagtgtacatgtgctatgtgccactaaactgggccaacacgagggctct
atcaacaagcttctagaacgctgtccacaagccatcatctcctacgccaaacatgagcta
cagaacgagaaactgtgtctttggtggcagaagcttttccctgagctctgtgagagaatc
agaagaacaggaaatgacaccacaatcctctctgcactccgagacgttttggctgtggtg
gccatagaactgaacccattagagttcctggacttgttaccggatgatggaacggctcag
tttttcctgccacatctgcttgagtgcagccagagaaatcttcttattgctctatatcag
aacatcacttgcctggacgtgtgggagtga
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