Triplophysa rosa: 130548322 Help Entry 130548322         CDS       T09216                                  Symbol capn1b Name (RefSeq) calpain-1 catalytic subunit b   KO K01367   calpain-1 [EC:3.4.22.52] Organism tros  Triplophysa rosa Pathway tros04141   Protein processing in endoplasmic reticulum tros04210   Apoptosis tros04217   Necroptosis tros04218   Cellular senescence tros04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:tros00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     130548322 (capn1b)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     130548322 (capn1b)    04217 Necroptosis     130548322 (capn1b)    04218 Cellular senescence     130548322 (capn1b)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     130548322 (capn1b)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:tros01002]     130548322 (capn1b) Enzymes [BR:tros01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      130548322 (capn1b) Peptidases and inhibitors [BR:tros01002]  Cysteine peptidases   Family C2: calpain family    130548322 (capn1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 CAPN13-like_C_EFh EF-hand_5 Motif Other DBs NCBI-GeneID:  130548322 NCBI-ProteinID:  XP_057181004 LinkDB All DBs Position LG25:6897668..6909573 Genome browser AA seq 704 aa AA seqDB search MYLFGGVSSSIQRERLKAEGMGTNENAVKFLNQDYEELKRECVESGRLFEDPCFPAVPQS LGFKELAPNSSKTRGVQWKRPTDLSDNPQFIVGGATRTDICQGALGDCWLLAAIASLTLN DRLLHRVVPHGQNFTDNYAGIFHLQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGNEFW SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELRKAPKDLHRIIAKALERGSL LGCSIDITSSMDMEAVTFKKLVKGHAYSVTGLKEVNYRGNRERLIRIRNPWGQVEWTGAW SDNSAEWNRIDPAEREELNTQMEDGEFWMSFQEFKRQFSRLEICNLTPDALSEDTQSFWN TIKFNGSWRKGSTAGGCRNSPNTFWINPQYKITLSEEDDDPDDAEVACSFLVALMQKDRR RFRKQGQDMHTIGFALYEVPEEFRGAQSVHLKKEFFLRHSSCARSETFINLREVSARLKL PPGEYLIVPSTFEPSKEADFVLRVFTEKQSETQEMDDEVSFSLEDEEEISEADIDDSFKT MFAQLSGEDMEISVHELKTILNRVVCKHRDLKTDGFSMESCRCMVNLMDKDGSARLGLIE FQILWTKIRKWLDIFRQFDLDKSGAMSSYEMRLAVESAGFKLNNKLHQILVARYSDGETI DFDNFVCCLVKLESMFKAFRELDRDGSGVAELNVCEWLYMTMCG NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atgtatttgtttggcggggtttcgtcgagcatccagagggagcgtctgaaggcagaaggg atggggaccaatgagaatgcggtaaagttcctgaaccaggactacgaggagctgaagaga gagtgtgtggagagtggaaggctgtttgaggacccctgcttccccgccgtgccccagtca ctgggattcaaggagctcgcgccgaactcctccaaaacacgcggtgtgcagtggaaaaga cccactgacctgtcagacaacccccagttcatagtgggcggggccacgcggacagatatt tgccagggggctttaggtgactgttggctgttggctgccatagcatctctgacgctgaac gacaggctgcttcacagagttgtacctcatggacaaaactttactgacaactatgccggc atcttccacttacagttctggcagtttggtgagtgggtggatgttgtcattgatgaccgg ctgcctgtgaaggacggagagctgatgtttgttcactcagcagagggaaatgaattctgg agcgccctgctggagaaagcctacgctaagctgaacggttcatatgaagctctgtcagga ggatccaccactgaaggctttgaggactttactggtggagtggctgagatgtatgagctg cgtaaagctcccaaagacctgcaccgcatcatcgccaaagctttggaacgaggttcactt ttgggctgctctattgatatcacaagctccatggacatggaagccgtgacatttaaaaag ttggtgaagggacatgcgtattcagtcacgggtctcaaagaggtgaattaccgtggtaac agagagaggctgattcgcatccgaaacccatggggacaggttgaatggacgggagcttgg agtgacaattctgccgagtggaataggattgacccggctgagagagaagaattgaacact cagatggaggacggcgagttctggatgtcttttcaggagttcaagcgtcagttttcccgg ctggagatctgtaacctaaccccggacgctctgagcgaggacactcaaagcttctggaac acgattaagtttaacggcagctggaggaaaggaagtacagcgggcggctgcaggaacagc cctaatacgttctggatcaacccacagtataagatcacgctgtcggaagaagatgatgat ccagatgatgcagaggtagcctgcagctttctggtggcgctaatgcaaaaagacaggcgg cgtttccgcaaacagggacaggacatgcacaccatcggctttgctttatatgaggtgccg gaagagtttcgtggtgctcagagtgttcacctgaagaaggagtttttcctgcggcactcg tcatgcgctcgctctgagacctttattaacctccgtgaggtcagcgcgagactgaagtta cccccgggcgagtatctcatcgtcccatccacctttgagcccagcaaagaggccgacttt gttctccgagtgttcactgagaaacagtctgaaacacaagagatggacgatgaagtttca tttagcctggaagatgaagaggagatttccgaagcagatattgacgactcttttaaaaca atgtttgctcagctgtcaggagaggacatggagatttcagttcatgagctcaaaaccatt ttaaacagagtggtgtgcaaacacagggatcttaaaacagacgggttcagcatggagtcg tgtaggtgtatggtcaacctgatggataaagatggcagtgcacgactgggactcatagag tttcagatcctttggactaaaatcaggaagtggctggacattttcagacagtttgatctg gataaatctggcgccatgagctcgtacgagatgcgtctggctgtggagtctgctggtttt aagctgaataacaagctgcatcagatactggtggcacgatattctgacggagaaacgatt gactttgacaactttgtgtgctgcctggtcaaactggagtccatgtttaaggcttttaga gagctcgacagagatgggtcgggggtagcagagcttaatgtgtgtgagtggctgtacatg accatgtgtggttga

DBGET integrated database retrieval system