Triplophysa rosa: 130548327
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Entry
130548327 CDS
T09216
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tros
Triplophysa rosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_At5g56370
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
130548327
NCBI-ProteinID:
XP_057181008
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Position
LG25:complement(6318393..6342573)
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AA seq
561 aa
AA seq
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MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDASGASPAVAFTLDSTIKRPNPPPST
RKKSSNAEVIKDLNKCREENSMRLDLSKRSIHQLPSSIKELTQLTELYLYSNKLQSLPPE
VGCLSGLVTLALSENSLTSLPDALDNLKKLRMLDLRHNKLREIPAVVYRVTSLTTLYLRF
NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEVLILSNNLLKKLP
HGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtactctgggcaaagataaagactctaaggagagggaaccgaaagccgaaggg
aaatccaaaaccaaagggaaagatgccaaagacgggaagaaggacgcaagtggcgcttcg
cccgccgtggccttcaccttggatagcacgataaaacgccccaacccgccgcccagcacc
cgcaaaaaatccagcaatgcggaggtcatcaaggaccttaataagtgccgcgaggagaac
tcgatgcgcctggacctttccaagagatccatccatcagttgccctcttccatcaaggag
ttgacccagctgaccgagctctacctgtacagcaacaagctgcagagcctcccgccggag
gtgggctgcctgtcgggtttggtgacgctggcgctcagcgagaactctctcaccagcctg
cccgacgctctggacaacctgaaaaagttgcgtatgcttgaccttcggcataacaaactg
cgggagattccagccgtggtctaccgcgtcacctctctcaccacgctctacctgcgcttt
aatcgcatcaccaccgtggagaaggacatcaagaacctgtccaaactcaccatgctcagc
atccgagagaacaagattaaacagcttcccgcagagatcggtgaactatgtaacctgata
acgctggatgtagcacacaaccagctggagcaccttcctaaagagattggcaattgcact
cagatcaccaacctcgacttgcagcacaatgaacttcttgacctacctgagactataggt
aacctgtcgagtataaaccgtttgggcctaaggtacaaccgtctttcagcgatccctcga
tccttggcgaagtgccgagagctggaggagcttaaccttgaaaacaacaacatttcagtg
ttaccagagggtcttctctccagcctggtcaacctgacgagtctgacgctggcaagaaac
tgtttccagtcttacccagtgggaggcccttcccagttctccactatctactctctcaac
atggagcacaaccgtatcaacaaaatcccttttggcatcttctccagagccaaagtgctc
agcaagctcaatatgaaggacaaccagctaacgtccctcccactggattttgggacgtgg
accagcatggtggagctgaacttggcaacaaaccagctcaccaagattccagaggatatc
tgcggccttgtgtctttagaggttcttatattgtccaacaatctattgaaaaagttgcct
cacgggattgggaatttacggaaactacgagagcttgacttggaggagaacaaactggag
tccctcccaaatgagattgcctaccttaaggatctacagaaacttgtgctgaccaataat
cagctgaccactttgcctagaggtatcggtcacctgacaaacctgacctacctgggcttg
ggagagaacctactgcagcacctacctgaggagatcggtacactggagaaccttgaggac
ctgtacctaaatgacaaccctaacctgcacagcctgccgtttgagttggccctatgcagt
aagctgtccataatgagcatagagaactgccccctcagtcacctcccaccccagatcgtc
gctggtggtccttcatttatcatccagttcctaaagatgcaggggccctaccgagctatg
gtctga
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