Triplophysa rosa: 130548368
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Entry
130548368 CDS
T09216
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130548368 (ccdc50a)
Membrane trafficking [BR:
tros04131
]
Autophagy
Other autophagy associated proteins
Others
130548368 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Sey1_3HB
Motif
Other DBs
NCBI-GeneID:
130548368
NCBI-ProteinID:
XP_057181073
LinkDB
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Position
LG25:8134425..8148737
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AA seq
583 aa
AA seq
DB search
MADFSIDQKNLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDLQVAK
RLQEEEDQRAKAVSKRQQRHIERIDNEMAQEIQEQLVWQAEQQRKQEEKDEAIARKLQER
EMKEERKRHKQLDSNFEEEYYEDQASRPQLDPRQQHPGSVSPGYRKERYQDHSSSRSPYN
SPDPHRKRNPNNSHGTRSRYPDSSESGLLRPPERFPEHHSPERRPKHSEDYSKERHRPLD
VDYIEPRRRRKQDPMDEPRTSRDDQETVVRRKEKPLKDHSATRDKDRNRDWEREQNAPKT
KERPRDGDHRGRSRDRTFSGDRGVERRGRPLDREMDRNGYGHESRERGRDGKREKHKSRD
KHHSRDRSRESEIDGDSLDPSRRCSEDSLEWEEHKSRPRLPSGPNDVFEGPNLRGPSNDG
QSPRERGRRVRGEYGMREATHGLAHLDLQDQESKDLEVARMLQEEEIKASQIDKRDSQVS
QDEELARRLMEEEKREYKKSRDKEKRRAEVPVQEEVVRPRTRDEVYNSEEEYQRARNHKP
ARPPPPTQQYENINPSYAYAESPYSPRPPSRPEAAYKGAYYRQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcagtattgatcagaaaaacctgcctggcgttaaagaggtgtgcagagac
ttcgctgtgctggaggaccactgcctggcccacaatctccaggaacaggagatcgagagt
catctggcatccaacgtccacaagagccgtctggtgcagcaggacctgcaggtagccaaa
cgtctgcaggaggaggaagaccaacgggccaaagccgtgagcaagagacagcaacgacac
atcgaacgcatcgacaatgaaatggctcaggagattcaggaacaactggtctggcaggct
gaacaacaaaggaaacaggaggagaaagatgaggccattgcccgcaaactgcaggaacgt
gagatgaaagaggagagaaaacgacataagcagctggattcgaactttgaggaggaatac
tacgaagaccaagcttcccgacctcaactggacccgcgacaacagcatcccggttccgtt
tctccgggttacagaaaagaacgatatcaggaccacagcagtagccgatccccgtacaac
tccccagacccacacagaaaacgaaaccccaataacagtcacggtacccgtagtcgatat
ccagactcatctgaatctgggctcttgaggcctccagaaagattcccagagcaccattca
cccgagcggcgaccaaaacactctgaagattattcgaaagaaagacatagaccattagat
gttgactatatagaaccacgcaggagaagaaaacaggatccaatggacgaaccccgaact
tcaagagacgatcaagaaactgtagtgcgcaggaaggagaaacccctcaaagatcattct
gctacacgggataaagacaggaacagagattgggagcgagaacaaaatgcaccgaaaacc
aaagaaaggccaagggatggagaccacaggggaagaagtcgagatcgaacgtttagcgga
gatagaggagttgaacgtaggggcagacccttggacagggagatggacagaaatggctat
ggacatgaaagcagagaaagaggcagagatgggaagagagagaaacacaaaagcagggac
aaacatcacagtagggacagaagcagagagagcgaaattgacggtgacagtcttgaccca
agtagacgatgttcagaggacagtctggagtgggaggagcacaagagcagaccgaggtta
ccatcaggccccaatgatgtgtttgaggggccaaatctcagaggtccctcaaatgatggt
cagtccccaagagagagaggacggagggttcgaggggagtatggaatgagggaagcgacg
catggcttggctcacttggatctacaagatcaggagtcaaaagacttggaggtggcgcgc
atgctacaggaagaagaaatcaaggcaagtcaaattgacaaaagagactcccaagtttcg
caagatgaggaattagcccgacggctaatggaggaggagaaaagagagtacaagaaatcc
agagacaaggagaaaagacgagctgaagtgccagtgcaagaggaagttgtacggccaaga
acacgggacgaagtgtataacagtgaagaagagtaccagagagcacggaaccacaaaccg
gcgaggccgcctccgcctacacaacagtatgaaaacataaacccgagctacgcttacgcg
gagagcccctattctccccgacctccatcaagaccagaggcggcatacaaaggtgcctac
tacagacagtga
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