Triplophysa rosa: 130548431
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Entry
130548431 CDS
T09216
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tros
Triplophysa rosa
Pathway
tros03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130548431 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130548431 (smarcd1)
03036 Chromosome and associated proteins [BR:
tros03036
]
130548431 (smarcd1)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130548431 (smarcd1)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130548431 (smarcd1)
PBAF complex
130548431 (smarcd1)
GBAF(ncBAF) complex
130548431 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130548431
NCBI-ProteinID:
XP_057181178
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All DBs
Position
LG25:complement(15663289..15672378)
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AA seq
510 aa
AA seq
DB search
MAARGGFQPATPGGGGVPMGPGPPVAVAGPGMGPGTPPGRMGPGGPQNHMYRSPMPGYPR
PGMPPSSRMTPQGPSMGPPGFGGSPVSRPGMPVMDPSRKRPPPNQIQQVQQQNRNQHAKK
KKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIF
ISNTFNPAKADAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIELD
KDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLARLL
GIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFESQRMKFSEIPQRLHALL
MPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNKIH
ETIETINHLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQP
WAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgtggaggttttcagcctgcgacaccgggaggcggcggagtaccgatggga
cccgggccgccggtggccgtggcggggcctggtatgggtcccggtacgccgcccggacgg
atgggccccggcgggccgcagaaccacatgtaccgatccccgatgcccggatacccgaga
ccaggaatgcctccatccagtcgcatgacccctcagggaccctccatggggcctccgggt
ttcgggggcagtccagtgtctcgccccggcatgcccgtcatggacccgtcccgcaagaga
ccaccgccgaatcagattcaacaggttcagcaacagaatcgcaaccaacatgccaagaag
aagaaaatggcggataaaattctacctcagcgaatccgagagcttgtccccgagtctcag
gcgtacatggacctgctggcgttcgagaggaaactcgatcagaccatcatgcgcaagaga
ctcgacatccaggaagcgctcaagagacccatcaagcaaaaacgaaagctgcgtatcttt
atctccaacaccttcaaccccgccaaagctgatgcggaggacggcgagggcaccgttgca
tcatgggagctccgtgtggagggtcgacttctggaagacaccgctgtgtccaagtatgaa
gccaccaaacagaagaggaagttttcatctttctttaagtcattagtcatcgagttggat
aaagatttatatggacctgacaatcatctggtggagtggcacaggacggccaccactcag
gagacggatgggtttcaggtgaagagacctggagatgttggggttcgctgtactgtactc
ctcatgctcgactaccagcctcctcagttcaagctggaccctcgattggcccgactgctg
ggcatccacactcaaacccgacccgtcatcattcaggccctgtggcagtacgtgaagacc
cacaaactgcaggaccctcacgagcgagagttcatcaactgtgacaaatacctccagcag
atctttgaatcccagaggatgaagttctctgagattcctcagcgtctgcacgcgctactc
atgccgcccgagccgatcatcatcaaccacgtcataagcgtggaccccaacgaccagaag
aagacggcgtgttatgatatcgatgtggaggtggacgacaccctgaagacgcagatgaac
tcttttcttctgtccacggccagtcagcaggagatcgcagggctcgacaacaagatccat
gagaccattgagacgatcaaccacctgaagactcaaagggagttcatgttgagcttcgcc
cgagacccgcagggattcatcaacgattggctgcagtcgcagtgcagagacctgaagacg
atgactgatgtggtcgggaacccggaggaggagagacgtgcagagttctacttccagccc
tgggctcaagaggccgtctgccgttatttctattcaaaggtccagcagaggagacaggag
ctggaacaggctcttggcattcgaaacacataa
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