Triplophysa rosa: 130548485
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Entry
130548485 CDS
T09216
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130548485
04121 Ubiquitin system [BR:
tros04121
]
130548485
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130548485
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130548485
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
hAT-like_RNase-H
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
130548485
NCBI-ProteinID:
XP_057181274
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Position
LG25:complement(14110841..14114367)
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AA seq
500 aa
AA seq
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MNIMAEQQKKGAEGRSLVPQKGSYSAVWNFFGFDECDVDQVRVLCKLCSCSFKTSQGNTT
NLVNHLKSHHRVQYQEFQRLKTQHASTLNTQPSTTQTTIKGTLFNAIPYSPCSQRHKEIT
EAITYHLAKDMCPLATVSNDGFKNMIAMLDKRYNIPSRNHFTKVALPSLYTKCRLEIERE
IRSIEYFASTTDLWSSRTAEPYLSLTVHFIDSDFAMKSKLLQTSFFPQAHTGELIAAGLK
EAISAWGLLEERLVCITTDNAANMIRAASVNNWTRLHCFGHRLHLAIENAMKDSRMDRAV
GLCKKLVSTFSYSWKRKREFSAAQKELKLPEHSLKTECPTRWGSRQAMIERVIEQQKATA
HVLSSDKKSRHLIPTWQDMDVLEAINKSLHPLVDFTDALLGEKYVSVSFVKPVLHLFNSS
ILKVKDDDTDLSRAIKSKILEYLNEKYSNPHIQALLDMASTVDPRFKMSYVAEDNQTSIQ
TRLKAEMQIVAMMVIKRAAL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaacataatggcggagcaacaaaagaaaggtgcagaaggacgttcgttagttccccaa
aaggggtcatactccgctgtttggaactttttcgggttcgacgaatgtgatgttgatcag
gtacgagtcttgtgcaaactgtgctcctgttccttcaaaacgtcccaaggtaacacaaca
aacctcgttaaccaccttaaaagccaccacagagtacaatatcaagaatttcaaaggctg
aagacacaacatgcaagcacactaaacacccagccatccacgacacagacaacaataaag
gggacattgttcaacgcaataccatattcgccatgctcacaaagacacaaggaaataaca
gaggcgatcacgtatcatttagccaaggatatgtgtccattagccaccgtgagcaatgac
gggtttaaaaatatgattgccatgcttgacaaaagatacaacattccctcacgcaaccat
tttacaaaagttgcgctgccctcgctgtatacgaaatgccgactggaaatagaaagagaa
attcgcagcattgaatattttgcttccacgaccgacttatggtcgagcagaaccgctgaa
ccgtatttgagtttgactgttcatttcattgacagtgattttgcaatgaaaagcaagctt
ttgcaaacttcgtttttcccacaagcccatacgggagagttaattgcagctggcctcaaa
gaagcgatctctgcatggggtttgctggaggaaagacttgtgtgcattacaacggacaac
gctgcaaatatgattagggccgcatctgtgaataactggacgaggttacactgctttggt
catagactgcatttagctatcgagaatgccatgaaggattcaagaatggaccgggctgtg
ggcctctgcaaaaagttggtgagcactttctcctacagctggaagcgtaagagggagttt
tcagcagcacaaaaggagctgaagctccctgagcactcactgaaaacagagtgtccaaca
aggtggggatcacgtcaggccatgatagagagagtcatcgagcagcagaaggccactgca
catgtcctgtcttctgacaagaagtctcgacatcttatcccaacatggcaggacatggat
gtgctagaggcgatcaacaaatccctgcaccctctagttgattttacagacgcactattg
ggcgagaagtatgtgagcgtgtcgtttgtaaagccagttcttcatcttttcaactcatca
atcttgaaagttaaggatgatgatactgacctgtcaagagcaataaagtctaaaatcctg
gagtacctaaatgaaaaatacagcaacccacatatccaggctctgttggacatggcatcg
actgtggatccacgttttaagatgagctacgttgctgaagacaaccaaacatcaatacaa
accagactgaaagctgagatgcagattgtggcaatgatggtaataaaaagagctgcactg
tga
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