Triplophysa rosa: 130548516
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Entry
130548516 CDS
T09216
Symbol
crocc2
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tros03037
]
130548516 (crocc2)
Cilium and associated proteins [BR:
tros03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130548516 (crocc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
130548516
NCBI-ProteinID:
XP_057181329
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All DBs
Position
LG25:16610279..16625429
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AA seq
2003 aa
AA seq
DB search
MSACENSSDLRLESVIQRLEESVLSEDKRLTVGGSSPDETASLPARVREIVSRNLSDTGA
AMSSVLSLQEENRLLQSELSRVEDLLAHSRAERDELAIKYSAISERLEQALRLEGGDGGM
DSPESRSLAQQNVNLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKCGD
LEQTLMEKSTELEKHKLTGRCDFSSNGHRREEDEHSSDLESALIRLEEEQQRSSGLSAVN
AMLREQLEQAGLANEALSQDIRRLTADWTKAREELEQRESDWRREEESFHSYFTSEHSRL
LALWRQVVGFRRHVCELKSATERDLSDMRKELVCVSQSAQLQCVSACAALRSREDGSALV
LERETAQRLQLEQQLRETLTDMMSLQSKSDSDRAGLNTRLADAVREEERLKARIEDQEQE
ITTLNNKLQDQSSHEESEVNILKTHTAALQNTLRDVTQLLFSDCEPLDGSIEEVVLPLLR
SSSSSSHIIPDTCLSALRSALTNRQLQLQELRERLQSAQSSVQQLRRQLGEAESGQQNAE
LRLQALQAERDEAHRERETAVRERDRLRKERDTLSSVKDGVDKAAQGAQTQVQLLQLEGE
KLQLAVTSAQRERDHEREEKDAITLERDRARAETDRIQQLREGSETRSSSLRAELSAVRE
SLQQVTIERQLMDTENTQLTDALNRSESSRAEISLLLSKLQSEETSLRDSLAKMSNINES
IAHDKSDLNSLIIQLEEEKNMLVCQRREAEQEKLTIRDELVRSEQNRLELDSVRLTLHQS
LQESELSRVGLEAELQSLRADRGKLQDRITQLVGEVSALEAELGAVRGEGDRQSTALEEA
GRGRAELARERAGLLVQLTASERENAVFTEEIAAFRSEREALETSLFEVQQQMNQIESRR
ENLESENQHLRLRTDTLTAELKQLRADRETVLSQSEREKDMLRDAFTAAQQEAQRSLRMA
LSDHQEELERLTNQKEALRCSLEAEHQVALRQIREQLEEEINRLEKERDELQEELHSLQR
DRDQRLLQAETDKQQALSMKEAEKAVLSEKVCYLQTELSTAALELERNNRDMILLKDQQR
VAVTALNTELQELHSQLQDTVSSHERELRRLQENCADQQTRANTALREFEECRTLLSASE
ESRDTTKRELLEMEKRLCQIRDAEERHRRDGVELRRSISDVTQEKDALSQSNVQLREALR
VAESERISVKHVCEEREQRVSLLEENLASAQKEVSDLRSCLREVERSRLEARRELQELRR
QVKVLDAEREQMGRQVAELQTRLSVEDQRDEERAKELITLKQKLTNTETSRNALQKDVCS
LQRRLSESESCWRSHERELMSHLQEARSCEKKLQDEARNLATRAQTASDASVRMQLQLSE
AQGRLAATEAELSRAEASRRDLEFRLCSLQSALTRTLGIGTRGRSSSRGRSPVGSSPSSM
ISLSGRRSVSPLRCSLSPAKDVAGNITPENTVVLRPLSPERTDAPLPVAPPELDPETLRS
GLRDFLQELRDAQRQRDEARGQLGSLQREFEEVTSERDSAHQRVLQLHNTLQECQEDKRV
LDDKLSTAQAQLHQQEELQRRGERDRRALNDKIKELERILLNTEAERRRVEEQCGKLRAG
EARLEAERRRLREALEAAEGRGTQVELERRSLEGELQRLRLSLAERETEIQSANERHDNT
LKQVAEGEGHNSSLQREVDRLTLLLSKAQEAETVQKERALALSQDLQEATAAHSVTQGRL
AALQKTLGQTENDRRQLQERADGLRSSVSDGKRNTTALMEQVQTLQSELSQSQLRTSELE
TELHNTQEALRQRSDSLTEAQRSLQAAHADKVSLEERLRSLQRAVALLETEKRDVERQAV
RLEKDKSALRNTLDKVERQKLQTEESSMRLSAEKGRLDRALNGAEQELQDAQRQIALLQA
QLAELEQTHSASEQSARLREEAQREAERLRIGQREAERALAARERVHRQRVKGLEEQVST
LKEQLQHEIRRRTPFVSPTSTVG
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgtgtgaaaactcaagtgacttgagactggagtccgtcattcagaggttggag
gagagcgttctgtctgaagacaagcggctgacggttggaggatcttctccagatgaaaca
gcgagtttaccggctcgtgtacgagagattgtgtccagaaacctgagtgacaccggtgca
gcgatgtcgtcagttctgtctcttcaggaggagaaccgtctcctgcagtcagaactgagt
cgtgtggaggatctgctggcccacagtcgagccgagagagatgaactggccatcaaatac
agcgccatcagtgagaggttggagcaggcgttgcgtttggaggggggtgacggagggatg
gactcacctgagtctcgcagtctggcgcagcagaacgtgaatctgcgcagacgcttggat
gaggagcaggcagcgtataaacgcaaactcacagcgtatcaggagggacaacagagacaa
gctcaactcgtacagaaactacaagccaaagttctgcagtataagaagaagtgtggagat
cttgagcagacgctgatggagaaatcaactgaactagagaaacacaaacttaccggtcgg
tgtgatttcagcagtaacggtcatcgcagggaagaagatgaacacagcagtgatttggag
agcgccctcatccgtctggaggaggaacagcagaggagcagcggtctgtccgcagtcaac
gccatgctgcgcgagcagctggaacaggccggactggccaatgaggcgctcagtcaggac
atccgcagactcactgccgattggaccaaagccagagaagagctggagcagagagagtct
gattggaggagggaagaggagtcgtttcacagttacttcaccagcgagcacagtcgtctg
ctggcgctctggagacaggtggtgggcttccgcagacacgtgtgtgaactcaagagcgcc
actgagagggatctgtcggacatgaggaaggagctggtgtgcgtgtctcagagcgctcag
ctgcagtgtgtgagcgcgtgtgcggctctgaggagtcgtgaggacggctcggctctggtt
ctggagagagagacggctcagagactgcagctggagcagcagctgagagagacgctcact
gacatgatgtcattacagagcaagagtgattcagacagagccggactcaacacacggctt
gcagacgcggtgagggaggaagagcgtctcaaagctcgtatagaggaccaggaacaagaa
atcacaactctcaacaataaactacaggatcagagcagtcatgaggaatctgaagtgaac
attctgaagacacacacagcagcgctgcagaacacactcagagacgtcacacagctgctg
ttttctgactgtgagcctctggatggaagcattgaagaggttgtgctgcctctcctgcgc
tcttcatcatcatcatcacacatcatccctgacacctgtctgtctgctctccgctcagct
ctgaccaacagacaactccagctccaggagctgcgagagcgtctgcagtctgcgcagtca
tcagtccagcagctgcgcaggcagctgggagaggcggagtctggccaacagaatgcagag
ctgcgtctgcaggcgcttcaggcagagagagatgaggctcatagagagagagagacagct
gtgagagagagagacagactgagaaaagagagagacacgctgagcagtgtgaaggacggt
gtggataaagcagcgcagggggcgcagacgcaggtgcagctgctgcagctggagggtgag
aaactgcagctggccgtgacgtctgcgcagagagagagagaccacgagagagaagagaaa
gacgccatcacactggagagagaccgagcccgagcagagacagacagaattcagcagctg
agggaggggtcagagactcgctcatcttctcttcgagctgaactgtctgcagtgagagaa
tctctccagcaggtgacgatagagagacagctgatggacactgagaacacacaactgaca
gatgcactcaacaggagcgagtcgagccgtgctgagatctcactgttgctcagtaagctt
cagtctgaggagacgtcactaagagattcactcgctaagatgagcaacatcaacgagagc
atcgcacatgacaagtctgatctcaacagcctcatcatacagctggaggaggagaagaac
atgttggtgtgtcagagaagagaagcagaacaagagaaactgaccatcagagatgaactc
gtacgctctgagcagaacagactcgagctggattctgtccgtctcactctacaccaatca
ctgcaggagtctgagctgtccagggtggggctggaggcggagcttcagtcactgcgggca
gacagaggcaaattacaggacagaattacacagctggtcggggaggtgagcgctttggag
gcggagctcggtgctgtccgtggtgaaggggacaggcagagcactgctcttgaggaagca
gggcgtgggcgggcggagcttgcacgggagagggcggggctcctggttcagctgacggca
tcggagagagagaacgctgtgtttaccgaagagatcgctgcctttaggtcagagagagag
gctctggagacgagtctgtttgaggtacaacagcaaatgaatcagattgagtctcgacga
gaaaatctggagtcagagaaccagcatctgcgcctgcgcactgacacactaaccgctgag
ttgaagcagttgcgtgctgacagagagacagttttgtctcagagtgagagagagaaagac
atgctgagagatgcattcacggccgctcaacaggaagcacagcgatctctgcgcatggct
ctctctgaccaccaggaggagctggagagactgaccaatcagaaggaggcactgcgctgc
agtctggaggctgaacaccaggtggcgctgcgacagatccgagaacagctggaagaggag
ataaacagactggagaaagagcgagatgaacttcaggaagagcttcactcactgcagcga
gacagagatcagcgtctactgcaggccgagaccgacaaacagcaggcgctgtccatgaag
gaggcggagaaagcggttctgtctgagaaagtgtgctacctacagacagagctgagtact
gcagcgcttgaactggagagaaacaaccgagacatgattctcctcaaagaccagcagcgg
gttgcagtcacagctctaaacacagagctgcaggaactgcacagtcagctgcaggacaca
gtgagttcacatgagcgtgagctgcgcagactgcaggagaactgcgcagaccagcagacg
cgagcaaacacagcactcagagagtttgaagaatgtcgcacactgctctccgccagcgag
gagagtcgagacaccacaaagcgagaacttttggagatggagaaacgcttgtgccaaata
cgggatgcagaggagaggcatagacgagatggggtggagctacgacggtccatcagtgat
gtcacccaagagaaagacgctctgagccaatcaaacgttcagctgagagaagctctgaga
gtggccgagagcgagagaatcagtgtgaagcatgtgtgtgaggagagagagcagagagtg
tcactgctggaggaaaatctagcgtctgcgcagaaggaggtgtcagatctgcgcagctgt
ctgcgtgaggtggagagatccagactggaggcgcgcagagagctgcaggaactgcgcagg
caggtgaaggttctggatgctgagcgagagcagatgggaagacaggtggctgagctgcag
acgcgtttgtctgtggaagatcagagagatgaggagagagcaaaagaactgatcactctc
aaacagaagctcaccaacacggaaacgtccagaaacgctcttcagaaagatgtgtgttct
ctccagaggcgtctgagcgagagcgaatcgtgctggcgcagtcatgagcgagagttaatg
tctcatctacaggaggcccgcagctgtgagaagaagctccaggacgaggcgcgtaacctc
gccacgcgtgcgcagacggcctccgacgcgtctgtgcggatgcagctgcagctgagtgag
gcgcagggtcgtctggctgcgacggaggcggagctgtcgcgtgcggaggcgtcccgcaga
gatctagagttcaggctgtgcagtctgcagtcggcgctcacgcgtacgctgggcatcggg
accagggggcggagcagcagcagagggcggagtccggtcggctcctctccatcctctatg
atctctctttccggacgtaggagcgtgtctccactgcgctgctcgctgtcgccagccaaa
gacgtggcaggtaatatcactcctgaaaacacagttgtgctgaggccgttgtctccagag
aggactgatgccccgctgcccgtcgccccgcctgagcttgaccctgaaactcttcgcagc
ggtctgagagacttcctgcaggagctgcgagacgctcagagacaacgagatgaggcacgc
ggtcagctggggtcactgcagagagagttcgaggaagtgacatcagagagagactctgcc
caccagcgcgtccttcagctgcacaatacactacaagagtgtcaagaggataagcgtgtg
ctggatgacaaactgtcgacagctcaagctcagctgcatcagcaggaagagctgcagcgg
agaggagagagagacagacgcgcactaaacgacaaaatcaaagagctggagagaatctta
ctgaacactgaagctgaacgcaggcgtgtggaggagcagtgcggtaaactgagggccgga
gaggcgcggctggaggcggagcggcgccggctgcgtgaggctttggaggcagctgaaggg
cgtggcacacaggtggagctggagaggcggagcttagagggagagctgcagagactgaga
ttgagtctggcagagagagagacagagatccagtctgctaatgaaagacatgacaacacc
ctcaaacaggtggcagagggtgaaggacataactcgtctcttcagagagaggtggacaga
ctgacgctcctactgtctaaagctcaggaggcagagacggttcagaaagaacgagccctc
gctctctctcaggacctgcaggaagccacggcagctcacagcgtcactcaagggcgtctg
gcagcgctgcagaaaacactgggtcagactgagaatgaccgcagacagctgcaggagcgt
gcagacggactccgatcatccgtgtctgatgggaagcgtaacaccaccgctctgatggag
caagtgcagacactgcagtcagaactgagtcagagtcagctgcgcacatctgaactggag
acggagctacacaacacacaggaggctctgcggcagaggtccgacagtctaaccgaagct
cagcgcagtctacaggctgctcacgcagataaagtgtctttagaagagcgcctgcgcagt
ctgcagagagcagtagcgttactggagacagagaagagagatgtggagagacaggccgtc
cgcctggagaaagacaaaagcgcgttgagaaacactctggataaggtggagcggcagaag
ctgcagacggaggagagcagcatgcgtctgtctgcagagaaaggacgactggatcgcgcg
ctcaacggcgcggaacaagagctgcaggacgcacagagacagatcgcactgctgcaggct
cagctggctgaactggagcagactcacagcgcgagcgagcagtcggcccgtctgcgtgag
gaagcacagcgcgaggccgagcgtctgcgcatcggtcagagagaggcggagcgagcgctg
gcggcacgtgagagagttcaccgtcagcgggtcaaaggtctggaggaacaagtgtcaaca
ctgaaggaacaattacagcacgagatccgacgcagaacaccgttcgtatcgcccacatct
actgtcggctga
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