Triplophysa rosa: 130548631
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Entry
130548631 CDS
T09216
Symbol
cacna1sa
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit, a
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
tros04020
Calcium signaling pathway
tros04260
Cardiac muscle contraction
tros04261
Adrenergic signaling in cardiomyocytes
tros04270
Vascular smooth muscle contraction
tros04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130548631 (cacna1sa)
04020 Calcium signaling pathway
130548631 (cacna1sa)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
130548631 (cacna1sa)
09153 Circulatory system
04260 Cardiac muscle contraction
130548631 (cacna1sa)
04261 Adrenergic signaling in cardiomyocytes
130548631 (cacna1sa)
04270 Vascular smooth muscle contraction
130548631 (cacna1sa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130548631 (cacna1sa)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130548631 (cacna1sa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130548631
NCBI-ProteinID:
XP_057181511
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All DBs
Position
LG25:complement(16940229..16957929)
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AA seq
1784 aa
AA seq
DB search
MEGGGDATMSSFIMDEETLKRKQREKLKKLQATGGNPRPARSLLFLTLKNPFRKACISIV
EWKPFEIIILLTIFANCVALAVFLPMPEEDTNNTNSNLESLEYIFLIIFTTECFLKIVAY
GLLFHADAYLRNCWNILDFVIVTMGLFTIVVDFVNNISGVEAPVEQKGGFDMKALRAFRV
LRPLRLVSGVPSLQVVMSSILKSMLPLFHISLLVFFMVTIYAIIGLELFKCKMHKTCYYA
GTDIIATVENEKASPCAQAGNGRRCTLNGSECLGGWPGPNNGITHFDNLGFSMLTVYQCI
TTQGWTDVLYWVNDAIGMEWPWLYFVTLILLGSFFILNLVLGVLCGEFTKEREKSSRSGE
YQKLRETQQLDEDLKGYMEWITQAEVMDNDQEGQGLLPLDGAETESLYEFDGLNKLMYYV
RHARRWNRFFRRKCRVWVKSRLFYWLVILLVFFNTLAIATEHHQQSQSLTNFQDNTNKVL
LSLFAVEMFLKMYAMGLPSYFISLFNRFDCFVVSVGVLELILVRMDVMSIMGISILRCIR
LLRLIKVTRHWTTLSNLVASLLNSVRSIASLLLLLFLFIVIFALLGMQVFGGKFNFPDDK
VRRSNFDDFPQALITVFQILTGEDWNSVMYDGIMAHGGPAVPGILVSIYFIILFICGNYI
LLNVFLAVAVDNLAEAESLTSAQKEKAEEKRRKKLLRENLSDKGEEEKALLAKKLAEQRA
KIEGIPTTAKLKVDEFESNVNEIKDPFPPADFPGDDEEEEPEIPTSPRPRPMADLQLKET
VVPMPEASSFFIFGPQNKVRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPMSFRN
QVLASADIVFTSVFTAEIVLKMTTYGAFLHEGSFCRNSFNILDLIVVGVSLLSMGMESSA
ISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACIGVQL
FKGKFHACTDPLKMTEAECKGTFIKHQENALHDMVLSKREWINSDLNFDNILNGMLALFT
VSTFEGWPKLLYKAIDSNLEDVGPVYNNRIEISIFFIVYLILIAFFMMNIFVGFVIVTFQ
EQGEQEFKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYIVTSCYFEYLMFLLIM
LNTMCLGMQHCNQSDHITHLSDMLNVIFTVLFTVEMILKVGAFKAKGYFGDPWNVFDFVI
VVGSIVDVILSEIDAALAAQGGLYCLTGCSEVNPMQVIADSENMSVSITLFRLFRVMRLV
KLLNRFEGIRNLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALIDGSMINRNS
NFQTFPQAVLLLFRSATGEAWQEIMLGCLYGQRCDPKSDYLPGEEYTCGSGFAVLYFMSF
YMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDDFKKIWAEYDPEATGRIKHLDVVT
LLRRIQPPLGFGKFCPHRVACKRLISMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFE
QANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDHFRKFMKRQEEYY
GYRPNKKNKNTMEIQAGLRSIEEEAAPELQRAISGDLLNDEEMDRAMDEAAEEGIYRRAG
GLFGNHVNPFSMERGTPMPTQVTSQRPLQIADSRAEETETSPGSPSYLTYHANFNNNNTN
DNRSRRSRCELHFPSCISASTQYGPVSAADFLILETLSAGGLKSLASDCQFVSATKAEMA
EALHMDLDMLERNSASILNERKGQSVFRERNTTTSKLDVTRCQV
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggcggtgatgcaaccatgagctccttcatcatggatgaggagactctcaag
agaaaacagagagaaaaactgaagaaactccaggccacgggcggtaacccgcgacctgct
cgatccctcctcttcctcacgctgaagaaccctttccgcaaggcctgcatcagcatcgtt
gagtggaaaccgtttgaaatcatcatcctcctcaccatctttgccaactgtgtagctctg
gctgttttcctgccgatgcctgaagaagatacaaacaacaccaacagtaacctggagagt
ctggagtacattttcctcatcatattcactacggaatgtttcctgaagatcgtggcgtat
ggacttctctttcacgccgatgcatatttacggaactgctggaatatattggactttgtc
attgtgacaatggggttgttcactattgtggtggacttcgtcaataacatcagcggtgtg
gaggctccagtggaacagaagggagggttcgatatgaaggctctcagagcgtttcgagtc
ctgcgtcccctgcggctcgtctctggggtccccagcctgcaggtggtgatgagctccatt
ctcaagtccatgttgcctctgtttcacatctccctgctggtgttcttcatggtcaccatc
tacgccatcatcggcctggagctgtttaaatgcaaaatgcataaaacgtgttattacgct
ggcacagatatcatcgcgacggtagagaacgagaaagcgtctccatgcgctcaggctggt
aacggacggcgctgtactctgaacggaagcgagtgtctggggggatggcccgggcccaat
aacggcatcacacattttgataatctgggtttctctatgctcaccgtgtatcagtgtatc
accacacagggctggacggatgttctgtattgggtgaacgatgccatcggaatggagtgg
ccctggctgtatttcgtcaccctgattctgttgggctcgttcttcatcctcaatctggtt
ctgggagtgctctgcggcgagttcactaaagagcgagagaagagttctcggagcggagag
tatcagaagttacgggagacacaacagttggatgaggatctgaagggatatatggagtgg
atcacgcaggcagaggtcatggacaatgaccaggagggccaaggtcttctcccactggac
ggagcagaaacagaaagcctttatgagtttgatggactgaacaaactcatgtattacgtt
cgacatgctcgccgctggaaccgttttttcaggagaaagtgtcgcgtttgggtgaagtcc
aggcttttctattggctggtgatattgctggtgttcttcaacactttggccatcgccacc
gaacaccatcagcagtcacaatccctcactaacttccaagacaacacgaataaagtgctg
ctgtctctgttcgcggtggagatgtttctgaagatgtacgccatgggactgccatcttac
ttcatttctctgtttaaccgtttcgactgcttcgtggtgtccgtgggagtcctggagctc
attctggtacgcatggacgtcatgtccatcatggggatctccatactgcgctgcattcga
ctgctgcgtctcatcaaagttaccaggcactggacgaccctcagtaatctggtggcatcg
ctcttaaactcagtgcgttccatcgcctctcttctccttctcctcttcctcttcatcgtc
atcttcgctctcctcggcatgcaggtgttcggcggaaagttcaattttcccgacgacaaa
gtgcgacgcagcaacttcgacgatttccctcaagcgctcatcacggttttccagatccta
acaggtgaggattggaactctgtcatgtatgacggaatcatggctcacggaggtccggcc
gtgcctggaatactagtcagcatttacttcatcatcctgttcatctgtggaaactatatc
ctcttgaatgtgttcttggcggttgcggtggacaaccttgctgaggccgagagtttgacc
tccgcccagaaagagaaggcagaagagaagagacgtaaaaaacttctcagggaaaatctt
tccgataaaggtgaggaggagaaagctctgctggcaaagaaactggctgagcagagagcc
aagatcgaaggaattcccactacagctaaactcaaagtggacgaattcgaatccaacgtg
aacgagattaaagatccgtttccaccggctgattttccaggcgacgatgaagaggaggag
ccagagattcccaccagccctcggcctcgtccaatggcagacctgcagctgaaggagacg
gtcgtgcccatgcccgaggccagttccttctttatcttcggcccgcagaataaggtccgc
aaactctgccatcgcatcatcaatgctacgaccttcaccaacatcatcctcctcttcatc
ctgctcagcagcatctcattggctgctgaggaccccatcgaccccatgtccttcaggaac
caggttctggcctccgccgatatcgtcttcacttcggtgttcacggcagagatcgtgctg
aagatgaccacatacggcgccttcttacacgagggctccttctgccgaaactccttcaac
atcttagacctgatcgttgtgggcgtttccctgctgtccatgggaatggagtcgagtgcc
atctcagtagttaagatcctcagggtcctgagagtactgagacctttaagagccataaac
agagctaaaggtcttaagcatgttgtccagtgtgtgtttgtggccatcaagaccatcggc
aacatcgttttagtcacaatgctcctggatttcatgtttgcctgcattggagttcagctt
ttcaaggggaaatttcacgcttgcacagatccactgaaaatgacagaggcagaatgcaaa
ggaacgttcataaaacatcaggagaacgctcttcacgacatggtgctcagcaagcgcgag
tggatcaacagcgacttgaactttgataacattctgaatggcatgctggcgcttttcacc
gtctcaacattcgaaggctggccaaagttgttgtataaagccatcgactcgaatctggag
gacgtcggccccgtttacaacaaccgcattgagatttccatcttcttcatcgtctacctc
atcctcatcgccttcttcatgatgaacatctttgtgggttttgttatcgtcacgtttcag
gagcagggagagcaggagtttaaaaactgtgagctggataaaaaccagcgccagtgcgtc
cagtacgccctgaaggctcgacctttgagatgctacatcccgaagaacccgtatcagtac
caggtgtggtacatcgtgacgtcgtgttactttgagtacctgatgtttctcctcatcatg
ctcaacaccatgtgtctggggatgcagcactgtaatcaatcggatcacatcactcatttg
tccgacatgctgaacgtcatcttcaccgtcctgttcacggtggagatgatcctcaaagtt
ggtgccttcaaagccaagggttatttcggcgacccctggaacgtctttgatttcgtaatc
gtggtcggcagcattgttgacgtcatactaagtgaaattgatgcagctcttgcggctcag
ggtggattgtactgtctcactggatgttctgaagtgaaccccatgcaggtcatagccgac
tctgagaacatgagcgtgtccatcacgttgttccgactcttccgcgtcatgcgtctggtg
aagctgctgaatcgtttcgaggggattcggaatcttctgtggaccttcatcaaatcattt
caggctttgccgtacgtggcgctcctcatcgtcatgttgttcttcatctacgccgtcatt
ggcatgcaggtgtttggaaaaatcgcactaatagacggatccatgatcaaccgcaacagc
aacttccagacgtttcctcaggctgtgctgctgttgttcaggagcgccacaggtgaagcg
tggcaggagattatgttgggctgtctgtacggtcagcgctgtgaccccaagtctgattac
ctgcctggagaggagtacacctgcggctctggattcgccgttttgtacttcatgagtttt
tacatgctgtgtgcgttcctgatcatcaacctgttcgtggctgtgatcatggacaacttt
gattatctgacccgtgattggtcgattctggggccgcatcatttggacgactttaagaag
atctgggctgaatacgacccagaggccacggggcgcattaaacatctggatgttgtgacg
ttgctgaggaggattcagccgcctcttgggttcggaaagttctgccctcatcgtgtcgcc
tgcaagagactcatttccatgaacatgccgctaaacagcgacggaacagtaacgtttaat
gccactctattcgctctggtgcgcacggcgctgaaaattaaaaccgaaggtaactttgag
caggccaatgaggagctgcgagcgattattaagaagatctggaaacgcaccagtatgaaa
ctgctggatcaggtcattccaccgatcggagatgatgaggtcacagtgggaaagttttac
gccacgttcctgatccaggaccatttcaggaagttcatgaagcgacaggaggaatattac
ggataccggccgaataagaagaacaaaaacaccatggagatacaggcaggtctgaggagc
atcgaggaagaagccgctcctgaactgcagcgggcgatctctggagatcttctcaatgat
gaggaaatggacagagccatggatgaagccgcagaggaggggatctacaggagagcgggt
ggcctgtttggtaaccacgtgaatccgttctcaatggagagaggaacacccatgcccacc
caggtgaccagccagcgccccctacagatcgcagacagcagagcagaggagaccgaaacc
tcgcccggctcaccctcatacctgacctaccacgctaactttaataacaacaacacaaac
gataataggagcagacggagcaggtgtgaacttcacttcccatcatgcatcagtgcatca
acccagtatggtcctgtcagtgcagctgacttcctcattctagagactctttctgctgga
ggtttaaagagtctggccagcgactgccagtttgtgtccgcaacaaaagcagagatggcc
gaagccctgcacatggacctcgacatgttagagagaaactctgcatccattcttaatgaa
cgtaaaggacagtctgtgttcagagagagaaacacaacaacatctaaactagatgtgaca
cgctgccaagtgtaa
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