Triplophysa rosa: 130548701
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Entry
130548701 CDS
T09216
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tros
Triplophysa rosa
Pathway
tros03018
RNA degradation
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130548701 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
130548701 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130548701 (lsm7)
03041 Spliceosome [BR:
tros03041
]
130548701 (lsm7)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130548701 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
130548701 (lsm7)
Spliceosome [BR:
tros03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130548701 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
130548701
NCBI-ProteinID:
XP_057181623
LinkDB
All DBs
Position
LG25:complement(13359582..13361405)
Genome browser
AA seq
103 aa
AA seq
DB search
MADKDKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagataagaaaaagaaggaaagtatatttgatttgtcgaaatatatcgac
aaacatatcagagtgaagtttcaaggaggtcgtgaagcaagcggtgtcttgaaaggcttt
gacccactgttaaatcttgtgttggatggcaccattgaatatatgcgagatccagatgac
cagtataaactgactgaagacacccggcagctcggtctggtcgtgtgtcgagggacgtct
gtcgttctgatctgcccgcaggacgggatggaggccattccaaatcccttcattcaacag
caggatggataa
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