Triplophysa rosa: 130548715
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Entry
130548715 CDS
T09216
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130548715 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130548715 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130548715
NCBI-ProteinID:
XP_057181638
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All DBs
Position
LG25:10094127..10133023
Genome browser
AA seq
1448 aa
AA seq
DB search
MPSLSIPPAMDGQSYSHSEGPHLDTGGFIMAPPMPHVFANHPWSFTPQICSLPCPLQSDN
QQHLLNDTSEMLTDAFHNSSNDFDFSSFAFPRNGDFFQDLPCLDDLSILSSPNDSLSEYT
VSSFLNADDMAPNVPTLWDINTPASGQELNSNRFQGLNSLEDITAIINTPPIGSYQRPQT
QPEEEEDVEVEESEELGHVNTYADYRPSKSKIGISHPDRVVETNTLSSVPPPDITYTLSI
PESTINNGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRTVAGIILENFL
KGRKKALWFSISNDLKYDAERDLQDIGAPNIQVHALNKIKYGDTATSEGVLFATYSALIG
ESQAGGQHRTRLKQILDWCEPGFDGVIIFDECHKAKNATSTKMGKAVLDLQNKLPLARVV
YASATGASEPKNMIYMSRLGIWGEKTPFNTFEDFLHTIEKRGVGAMEIVAMDMKVSGMYI
ARQLSFSGVSFRIEEINLDDDFKLVYNKAAKLWAEALALFMQAADELCMNSRKSLWGQFW
SSHQRFFKYLCIAAKVRCLVELAKKELEAGKCVVIGLQSTGEARTREVLDENDGHLDRFV
SAAEGVFQSLVVKHFPSEKQRGEKGAGNKRKLKPRGRQPKQPRHGTDVAGVINISDDSST
ESDPMDSDSNSSPDSIQDNNDDVIFVNQTSYQMARLEEMKQGLLNKIAELGKELPLNTLD
ELIDKFGGPEKVSEMTGRKGRVVHQPDDSVRYESRAEQGHTIDQINIKEKDRFMNGEKLV
AIISEAASSGISLQADRRIKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYIFL
ISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALDKITKAILG
QIESKVPPPKDYPGGDATFFRDMKHGMMNVGMLCTQSRLGINTEKDCNITKFLNRILGLE
VHKQNSLFQYFIDNFDYLIEKDKKEGKYDMGILDLAPGNDQIYEETQEKFLTAGNPQDGQ
VILYKISVDRGMPWSEALEKVQTLSNPDEGFYLSHKFRGNHPCVLLAVQGRERTMTIYKP
NIGKQAQMESLDNLQKKYRKVTADEAKESWENQFMFSFRKCSHANWNGRCKKVEEGQECL
MGTRLRQYHMLCGALLRVWKRVSEVVADITSSSILQIVRLKTKDSNKQVGIKIPETCVLK
VRQELIRMDSEVKQRRREKEQQAQEERQAREHQRFMEHQRLVEQQQFLSNLVTVQAPSLA
TLSTPYSISYPSFTSQKNPLEEILDLTVYNTATSTQGVHNLSAPSRSTVNDFNLEAFFQE
EQQSQRDSQSVQESNPAQEEELQDVLFSLNFLSQSVPPTSSSETQTTEPVMSSSPSASLF
TPTLTPSSSSSSLSLASLSPTDQHMPLPNNHCSAEALINVREVLNNMFRSDPRKSVIYYP
LPERDPPV
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctctccattccgcctgccatggacgggcaaagctactcgcattcagaagga
cctcacctggacacaggagggttcatcatggcgccccctatgccccatgtgttcgccaac
cacccttggagcttcacgcctcagatttgcagcttgccatgtcccttgcaatccgataac
cagcaacacctgctcaacgacacatcagagatgctcaccgatgcctttcacaacagctcc
aatgactttgacttctccagctttgcctttcctcggaacggagacttcttccaggacctc
ccctgtctggacgatctgtcgatcctctcctctccaaacgactctttgtccgaatacaca
gtttccagcttcctcaatgctgacgacatggcacccaatgtgcctacattatgggacatc
aacacaccagcatcaggccaagagctgaattctaataggtttcaaggtttaaactctttg
gaagacatcacagccatcattaatacaccgcccatagggagttatcagagaccccaaaca
cagccagaggaggaagaggatgtagaggtggaggaatcagaggagctgggtcacgtcaac
acatacgccgactacaggccctcaaaatccaagataggaatatcccatccagaccgtgtg
gttgagaccaacactttatctagcgttcctcctccagatatcacctacaccctgtccatc
ccagaatccaccataaacaacggcctgctctctgccttgcagctggaggccatcatctac
gcctgccagcaacatgaagtgattttgcagaacaaccaacgagccggtttcctcataggg
gacggagcgggagtcgggaaaggccgcacggtggccggcatcattctggaaaacttttta
aagggaagaaaaaaagcactgtggttcagcatctccaatgacctgaaatatgacgcagag
agagatctccaagacatcggcgcacctaatatacaagtgcatgcattgaataagattaag
tacggggacacagctacctcagagggggtcctgtttgcaacttactcggcactgatcggc
gagagccaggcaggcggccagcacaggacgcgtctcaaacagatcctagactggtgtgag
ccgggttttgacggagttatcatatttgacgagtgccacaaagccaaaaatgccacgtcc
acaaaaatgggcaaagccgtgctggatctgcagaacaagttgccactggccagagtggtt
tacgctagtgccacaggcgcctcggagccaaagaacatgatctacatgagccgtctgggg
atctggggagagaaaacccctttcaatacgtttgaggatttcctccacaccatcgaaaag
aggggcgtgggggccatggagattgttgccatggatatgaaagtcagcgggatgtacatt
gcacgtcagctcagcttctcaggggtctcgttccgcatcgaagagataaacttggatgac
gacttcaaacttgtgtacaacaaagctgccaaactttgggcggaagctctggccttgttc
atgcaagcagcagacgagctgtgcatgaactccaggaagtccttgtggggtcagttttgg
tcatctcaccagcgtttctttaaatatctctgcattgccgccaaggtacgatgcctggtg
gagttggctaaaaaagagctggaggctggaaagtgtgtcgtgatcgggctccagtcaact
ggcgaggctcgaacgagagaagtcctcgacgagaacgacggacacttggacagattcgtt
tccgctgccgagggtgtgtttcaatctctggtcgtcaaacacttcccgtcagagaagcag
aggggagaaaagggggctggaaacaagaggaaacttaaaccacgcggcaggcagcccaag
caacccagacacggcactgacgtcgcgggggtgattaacatcagcgacgacagcagcaca
gagtctgaccccatggacagtgactccaactcatcgcccgactcgattcaggacaacaac
gatgatgtcatctttgtcaatcaaactagttatcaaatggcacggttagaagagatgaaa
caagggcttctcaataagatcgctgagctcggaaaagaactacctcttaacacgctggat
gagctcatagataaattcggaggcccagaaaaagtatcagagatgactgggagaaaaggc
agagtggtgcatcagcctgatgacagcgtacggtacgagtcccgcgccgagcagggccac
accatcgaccaaattaacatcaaagagaaagatcgcttcatgaatggagagaagttggtg
gccatcatatcagaagcggccagttcaggcatctcgcttcaggccgacagaagaataaag
aatcagcgtcggagagttcacatgaccttggagctgccctggagcgcagacagggccatc
caacagtttggtcgcactcatcgttccaaccaggtcacagcaccggagtacatcttcctc
atatccgaactggcgggcgagaggcgcttcgcatccatagtggcaaagaggctggagagt
ctgggagctctgactcatggtgacaggagagccaccgagtctagagatctgagcaaatac
aactttgaaaataaatatggcaccaaagcgctagataagataaccaaagccatccttggt
cagattgaaagcaaggtaccccctccaaaggactatcctggtggtgatgccacgtttttc
agagacatgaaacatggtatgatgaacgtaggcatgctctgcactcagtcacgcttgggc
atcaatactgagaaagactgcaacatcaccaagttcctgaaccggatccttggcctggag
gtgcataaacagaactcccttttccagtatttcatcgacaactttgactacttgattgag
aaggacaaaaaagaggggaaatatgacatggggatattagatcttgctccaggtaatgat
cagatctatgaggagacgcaagagaagttcctgaccgctggaaaccctcaagatggacaa
gttattctttataagataagtgtagacagaggtatgccatggtcggaggccctcgagaag
gtccagacactcagcaacccggacgaaggcttctacttatcccataaatttagaggtaac
cacccgtgcgtgctgctggccgtgcagggccgagagcgcacgatgaccatctacaaacca
aacattggcaagcaggcccaaatggaaagccttgataaccttcagaaaaaatatcgcaag
gtcactgcagatgaggctaaagaaagctgggaaaatcagtttatgttctccttcaggaag
tgtagccacgctaactggaatggaaggtgtaaaaaggttgaagagggccaggagtgtttg
atgggcactcggttgcgtcagtaccacatgttgtgcggtgctctgttgcgtgtttggaag
cgggtgtccgaagtggtggctgacatcaccagctccagcattctacagatcgtccgcctc
aagacgaaagacagcaacaaacaagttggtattaaaatccctgagacctgcgtgttgaag
gtacgtcaggagctgataaggatggacagcgaggtgaagcagcgccggagagagaaggaa
cagcaagcgcaggaggagcgtcaggcccgggagcaccaaaggttcatggagcaccaaagg
ctcgtggagcaacaacagttcctgtcgaatttagtcacagtgcaagctcctagcctggcc
accctgtccaccccatactccatctcctacccctcctttacatctcaaaaaaatcctctg
gaggagatcctggacctgacggtttacaacaccgcgacctccacacaaggtgtgcacaat
ctctccgcaccatccagatccacggtgaacgattttaacctcgaagcgtttttccaagag
gaacagcagtcgcagcgggacagccagtccgtgcaggagagcaatccagcacaggaggaa
gaactgcaagacgtgttgttctccttaaacttcctaagccagagcgtccctcccacttcc
tcttcggaaacacaaacgacagaacctgtgatgtcatcgagtccatcggcatccctcttc
acgcccacactcacgccttcctcctcttcttcatcgctgtccctcgcctccctctccccc
acggaccagcacatgccgttacccaacaaccactgcagcgccgaagctcttattaacgta
cgggaggtgttgaacaacatgtttcgtagcgaccctcgcaagtccgtcatttattaccct
ctacccgagagagaccctccggtctga
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integrated database retrieval system
