Triplophysa rosa: 130548749
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Entry
130548749 CDS
T09216
Symbol
srfa
Name
(RefSeq) serum response factor a isoform X1
KO
K04378
serum response factor
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130548749 (srfa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130548749 (srfa)
Transcription factors [BR:
tros03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
130548749 (srfa)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
130548749
NCBI-ProteinID:
XP_057181713
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Position
LG25:complement(3324741..3341702)
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AA seq
543 aa
AA seq
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MLGGNGAARGVGRSGNGAGMTSLQVGSTSGALAGVNSALNLPDAGRYDDRPSDHHAVLSG
SDVDSDSVDDEEISLSDRRGVKRERSEMEVGVSSGSNAGVAAGYGGVSSGVAGAKPGKKT
RGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATR
KLQPMITSETGKALIQTCLNSPDSPPRTDPSTDQRMSATGFEETDLTYQVSEADGLTDPK
EMIKPTYTAASIPGVTSSTTTSASSSPISSSVAMQTQSSATYWPLTTGINAQNMSSANGT
VLKTTGSSPAGVMQLPGGFTIMPGASLPPGTHTIPLSQLQTHSLAIQCPQTLNSHITAST
TAAVVPAHTQSTPQTTLFRLPATVSLTGGAMPQQLQAIQVHPSPQSSESSLEISQTSATS
SASHTATIVTSSVPSSVASHMMYPGAHAAVMYATSSPALTDGSLTVLNTFQQPHTAMHMS
HAQAQDSGAVQQMFLSGPQGTVQIPVSAVPIHSMLINQPSTGNNAATTLTELRVVNLDNP
KGD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgttagggggaaacggggctgccagaggggttggacgctcaggtaacggcgcaggcatg
acttctctacaggtaggtagcacatctggggctttagcgggggtaaactctgccttaaac
ctgcccgatgcgggcagatatgacgacaggccgtcggaccatcatgcagtgctgagcgga
tctgatgtagactcggactcagtggatgatgaagagatttcattgtcggacagaagggga
gtgaagcgggagaggagtgagatggaggtcggggtttcctctggatctaatgctggagta
gcagctggatatgggggggtttccagcggggtggctggggcaaaaccgggcaagaagact
cgaggacgggtgaagattaagatggagtttattgacaacaagctgaggagatacacgacc
ttcagcaagaggaagactggcattatgaagaaggcatacgaactgtccaccctaacggga
acgcaagttttgctcttggttgctagcgagacgggccacgtctacacctttgccacacga
aagcttcagcccatgatcaccagtgagacgggtaaggccctcatccaaacctgcttgaac
tcccccgattcaccgccccgtactgacccttccacagaccagaggatgagcgccacagga
tttgaggagactgacctcacctaccaggtttcagaggcagatggtcttacagatccaaag
gaaatgataaagcccacatatacagctgccagtatacctggagtcaccagcagcacgacc
acatcggcctcttcctctcccatctcatcatcggtcgccatgcagacgcagagcagcgcc
acctactggcctttaaccacaggcataaatgcccagaacatgtccagtgcgaatggcacg
gtgctgaaaacgacgggcagttcacccgctggggtcatgcagctgccaggtggattcaca
atcatgcctggcgcttctcttccgcctggcacacacaccattcccctcagtcagctgcag
acgcactctctggccatacagtgtccgcagacgctaaacagccacatcacggctagcacc
accgctgccgttgttcccgcacacacacaatccaccccacagaccacgctcttccgcctg
cccgccactgtctcgcttacaggtggcgcaatgcctcaacaattacaagccatccaggtt
catcccagtcctcaaagcagcgagagcagcctagagatcagtcagacgtctgccacttcc
tctgcgagtcacacggctaccatcgtcacttcctcagtgccttcttcagtggcaagtcac
atgatgtacccgggagcgcacgcggccgtcatgtatgctacatccagccctgcactcact
gacgggagtctaactgtgctgaataccttccaacaaccacacactgcgatgcacatgtcc
cacgcgcaggcccaagattcgggtgccgttcagcagatgtttctttcaggacctcaagga
actgtacagatcccagtttcagctgttccgatacattcgatgttgatcaaccagccatcg
accggtaacaacgccgccaccaccctcacagagctccgggtggtcaatttggacaatcca
aaaggagactga
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