KEGG   Triplophysa rosa: 130548794
Entry
130548794         CDS       T09216                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
tros  Triplophysa rosa
Pathway
tros03013  Nucleocytoplasmic transport
tros04141  Protein processing in endoplasmic reticulum
tros04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130548794 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130548794 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    130548794 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tros03019]
    130548794 (sec13)
   04131 Membrane trafficking [BR:tros04131]
    130548794 (sec13)
Messenger RNA biogenesis [BR:tros03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130548794 (sec13)
Membrane trafficking [BR:tros04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    130548794 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    130548794 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    130548794 (sec13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 130548794
NCBI-ProteinID: XP_057181792
LinkDB
Position
LG25:complement(5372517..5378008)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPSGNAWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDNQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtgtctgtcattaatacagtggacacctcacatgaggacatgatccatgatgctcag
atggattactacggcaccagactagccacctgctcttctgatcgctccgtcaagatcttt
gatgtcaagaacggaggacagatccttgtggccgatctcaggggtcatgagggtccagtg
tggcaggtggcctgggctcaccccatgtatggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggaaagaggagaacggcacctgggataagatgtatgaatacaca
ggccacgactcctcggtgaattcggtttgctggggaccgtatgactttggcttaattctg
gcttgtggcagctctgatggcgccatttcagtattaacatgttcaggtgatggccattgg
gatattaaaaagatcaacaatgcacacacaatcggctgtaacgcagtgagctgggcccca
gctgtcgtccccgggagtctgatagagcagccatcaggacagaagcccaactacatcaag
agattcgtgtctggaggctgtgacaatctggtcaagctgtggaaagaggaagatggccaa
tggaaagaggaccagaagttggaggcgcacagtgattgggtgagagacgtcggctgggct
ccttccattggtctaccgactagcacaattgccagctgctctcaggatggccgtgtgttt
atctggacgtgcgacgacccgtcgggcaacgcctggacggccaaactcctccacaaattc
aacgacgtggtgtggcacgtgagctggtccatcactggaaacatcctagctgtgtcaggc
ggggacaacaaagtgaccctctggaaagagtcggtggacggccagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtttcctccatcacagacaaccaacagaacgagcaa
tga

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