Triplophysa rosa: 130549113
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Entry
130549113 CDS
T09216
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
tros
Triplophysa rosa
Pathway
tros03420
Nucleotide excision repair
tros04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130549113 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
130549113 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tros03051
]
130549113 (rad23ab)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130549113 (rad23ab)
Proteasome [BR:
tros03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
130549113 (rad23ab)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
130549113 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_2
Ubiquitin_2
Methyltransf_10
Motif
Other DBs
NCBI-GeneID:
130549113
NCBI-ProteinID:
XP_057182256
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Position
LG25:complement(14800172..14806031)
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AA seq
486 aa
AA seq
DB search
MASFHNISRSGPSPHLQKTAESHLHALSPRTLSPRDSRSDTMLTITLKTLQQQTFKVHID
EELTVKALKEKIEAEKGKDSFPAAGQKLIYAGKILNDDIPLKEYKMDEKNFVVVMVTKPK
STSPPQAPPAVTPAAVSIPLAELSVLSPSPPDAPPAVPAVPVSTPALDHAEPAPEHAEPE
PSVEPPEPSVEPPEPSVEPPTPPVTAPPVALDVGAESSEPVEVTPDPVPLLEEGTQAIAQ
SEASSLDELGLLEAAASILVTGQAYENLVMEIMSMGYEREQVIAALRASYNNPDRAVEYL
LMGIPTESEQPPQEVVRPAPVSNPAPSAPQRPQPPPAAAGEEHLLKQMHGAESGSAQASE
NPLEFLRNQPQFQQMRQIIQQNPTLLPALLQQLGRDNPQLLQQITQHQERFVHMLNEPQV
GEAEAAEAHSAPQTNYIQVTPQEKEAIDRLKALGFPEGLVIQAYFACEKNENLAANFLLQ
QNFDDE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttttcataacatctcgagatcaggaccatcaccacatctccagaagaccgct
gagtcacatctccacgcgctctcaccgcggacgctttctccacgagactcccggtctgac
acgatgctgacgatcacgctgaaaaccctgcagcagcagacgtttaaagtgcacatagac
gaggagctgacggtaaaagctcttaaagagaagatagaggcagaaaagggaaaagattct
tttccagccgctggtcaaaaactcatctatgcaggtaaaatattgaatgacgacatacct
ctaaaagaatacaaaatggatgagaagaactttgtagtggtaatggttactaagcctaaa
tctacatcacctcctcaagctcctcctgccgtcaccccagctgcagtaagcatccctctc
gcagaactttctgtcctttcaccatcacctcctgacgctccacccgcggtccccgcagtg
cctgtatcgaccccagctcttgaccatgcagaaccagctcctgaacatgcagaaccagaa
ccatcagtggaaccgccagaaccatcagtggaaccgccagaaccatcagtggaaccgccc
acaccacccgtcacagcgccccctgtggccttagatgtcggtgcagaatcctcagaaccg
gttgaagtgaccccggatccagttcccctcctagaggaggggacccaggccattgcccaa
tcagaggccagttccttggatgaattgggtctgctagaagcagctgcttcaatactagtt
acaggtcaagcatatgagaatttagtgatggagatcatgtccatgggttatgagagagaa
caggtgatcgccgccttacgagcgagttacaacaatccggaccgagcggttgaatatttg
cttatgggtatacccacagaatccgagcagccaccccaggaagttgtgcgtcccgccccc
gtgtctaaccccgccccctcagcgccacagcgacctcagccgccacctgctgcagccggt
gaggaacatttgttgaaacagatgcatggcgccgagtcgggatctgcgcaggcgtcggaa
aacccgctggagttcctgaggaaccagccgcagttccagcagatgcgacagatcatccag
cagaaccccaccctcctacctgccctgctgcaacagctgggtcgagacaacccgcaactc
ctgcagcaaatcacgcagcatcaggagcggttcgtacacatgctgaacgagccgcaggtc
ggggaggcggaagccgcagaagcccacagcgcacctcagacaaactacatccaggtcacg
ccacaggagaaagaagcaatcgataggttaaaagctcttggtttcccggaaggactcgtc
attcaagcgtatttcgcctgcgagaaaaacgaaaacctcgccgccaacttcctgctccaa
cagaacttcgacgacgagtga
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