Triplophysa rosa: 130549189
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Entry
130549189 CDS
T09216
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130549189 (lingo3a)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130549189 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
LRR_4
Ig_3
ig
Ig_2
LRR_LRWD1
LRR_14
LRR_9
LRRNT
Cupin_1
V-set
Ig_6
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
130549189
NCBI-ProteinID:
XP_057182387
LinkDB
All DBs
Position
LG25:8882611..8909835
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AA seq
605 aa
AA seq
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MADCPHLSLPGLFVLLITASVTHGQTCPQRCDCILQQRAVMCQNKRLSSIPGGIPVDTRL
LDLSGNSLRWVEYNDLASFSRMEELDLSENLISVLEPNAFSSLLNLKVLRLRANQLKLIP
MGAFSRLANLTTLDLSENKLVILLDFTFQDLRNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSISGQSLSYLRGLVTLRLCYLSIASLEEQNFRKLGGLRGLEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLNLSYNPISVLESWALRDLVRLKE
LHLVGTNLILVQPYGLGGLQQLRLLNLSNNALVTLEEGSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFDRRSPICAAPVEVRGKALNMFSDSALFDHFTCQRPKIRNRKLQQLT
AREGQVVSFVCRAEGDPTPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVSGSPLDSALAANRTYYIGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCITFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGSQGGTRKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgtccacacctgagcttaccggggctgtttgtgctcctaatcactgcgtcc
gtaacacacggccaaacctgcccccagcgctgtgactgtatcctgcagcaaagagccgtc
atgtgccagaacaagcgtctgagctccattcccggaggcatacctgtcgacacgcggctg
ttggacttgagcggtaacagtttgcgctgggtggaatacaacgacctggctagcttctcg
agaatggaagagctggacctgagcgagaacctcatcagtgtcctggaacccaacgccttt
tccagtttgctcaatctcaaagtcttgcgtctgcgcgccaaccagctgaagctcataccc
atgggtgccttttcacgtctcgccaacctcaccacgttggatctgagtgagaacaaactg
gtcatcctattggacttcacctttcaggacttgcgtaacctgcgcaatttggaagttggg
gataatgacttggtgtacatttcaaacaaggcttttctgggtctggttggtcttcgggaa
ctcacgattgagagatgcaacctgacttccatatccggacagtctctttcctaccttcgc
ggtttggtgactctacgattatgctacctcagcattgcttcgttggaagagcagaacttt
cgtaaactgggcggtttgcggggtctcgagatcgaccattggcccttccttgagtacatt
tctccacacagcttccagggtctcaatctctcctggctctcgattaccaacaccaatatt
tccacagtgcctacgggtgctctccgaaacctcattcacctggccagcctcaatctttcc
tacaacccaatctctgttcttgagtcttgggccttgcgcgatcttgtacggctaaaggaa
ctccacctagttggtacgaacctgatattagtgcagccatatggtctcggaggtttgcag
cagttgcgtttgctcaatctatcaaacaacgcattggtgacgttggaggagggctccttc
cattccgttaacaccctggagacgttgcgtgtagacggcaaccctttgtcctgcgactgc
cgcctactctggatcctacagcgtcggaagactctcaattttgacagaaggtcaccaatt
tgcgctgcccctgtggaagtacgaggaaaagcactcaacatgttctcagactcagcgttg
tttgaccacttcacatgtcaaaggccgaaaatccgcaaccgtaagctacaacagctcacg
gcacgtgaaggtcaggtggtgtcgtttgtgtgccgagcagaaggagatccgactcctgtc
attttttggatttcacctcaacgccgccgtatcaccaccaaaagcactggtcgtgttatt
gtactccctgaaggcacgttggagatccggtatgcccaggtgacagacagcggtacttac
atctgcatagcaagcaacgctggtggcaacgacacctactttgcgacattaacagtcagt
ggatcaccacttgatagtgctctggcagcaaaccgcacgtactacataggcgatcttaat
gacacaaacttaaacgacacacgtgtcttcctcaagttcacgttggacctcaaaaccatc
ctggtgtcaacagcaatgggctgcatcacttttttgggtgtggtgctgttctgttttata
ctgctgttcgtgtggagccgagggcgtggtcagcataagaacaatttctcagttgagtac
tccttcagaaaggtcgatggcccagcagccagcggcagtcaagggggtacgcgaaagttt
aacatgaaaatgatataa
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