Triplophysa rosa: 130549199
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Entry
130549199 CDS
T09216
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18
KO
K21066
A-kinase anchor protein 18
Organism
tros
Triplophysa rosa
Pathway
tros04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130549199 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130549199 (arhgef18b)
Membrane trafficking [BR:
tros04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130549199 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
PH_13
C1_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
130549199
NCBI-ProteinID:
XP_057182403
LinkDB
All DBs
Position
LG25:13297674..13323675
Genome browser
AA seq
1378 aa
AA seq
DB search
MDRLFAIRTSEFQDFPGPEQDEDSEMESIPILVRSMSTSRRHSSDMPLSPIDLGRRFSLD
TTGIDSDGEQEMRCLQSSHLPSSSFSESSVEETPGAIETESLETAKPPDSGKTVYSRSEI
LATEEKSQADRVSRILETSQQAAREAGEDQETEEGLQSVDGRCHVLMVQKVLQELKQYHG
TSSTDRKEFSGNVTWYEFLSNDKNDDEEEERPERSEKGTKVKRTLSSLKNRMTGSFNKDK
GKTREREQHKSTEKEFKEHKKVRRVSVSGHQLVPGSFSSWARCSLCSKSLQRKHGLQCLN
CAVNVHKSCRTLLPECSSKGKTKDSVQKISTSATQSSNQALRETSSTLTLAADGSSRKAR
CASGMTVSPKGHSAQPAASSNHTANQNSSSSSGSVAGDMDEVDAFRMKRPADDTVSLVSS
TPESLIVEDAYYTTLRGELDSIAQDFEVESWSLAVDNNFLKKHSKEMTKRQDVIYELIQT
EMHHMRTLKIMQRVYARELREALQMDDKRLDCLFPQLDSLLELHSHFLSRLRERRAESLQ
TGSERDYAINQLSDILISQFSGELGERMKDCYGDFCSRHTEAVNYYKEQLQSNKKFQNLM
RKISNLSIVRRLGVPECILLVTQRITKYPVLVERILHNTEAGTEEHEGLAEALCLIKDVI
VQVDSQVNLYEKEARLREISSKMEPKPLGKIKDGCFFRKEDLCQGRRRLLNEGTVYWKAA
SGRLKDILALLLTDVLVLLQEKDQRYMFSTVDNKPSVISLQKLIVREVAHEERAMFLICA
SSNRPEMYEIHTASKEERNTWITHIRQAVESCPHTEERLFSEEVEARVARFREFHERLML
KDAEIAHSLTDKLQLFSDLVESVAGVEDGSHRSRLLLRGEASEVQQGEQLLKGAITEVEN
LQNLLASGVKETSPQTEGNQSPGLSMLPRRADTFGGYDSAPKILPKNGSIKKKVSGAASR
SRDRSERASSDPQIKEVYTCQIQEELDETSSPGCHKKSTFRFPQAEFYERVLLLSQRLYS
LQAIVAQQDSHIELQRASLLTAERERSGGRSRGTDVLLEQEKQRNLEKHREEMANFQRLQ
SQHRQEQARWERERERQRRQTEAAERKLKEKEEECRRLEARLAEERQELERQKQTYQQDL
ERLRESTRAVEKERERLEQQRKLRKHNTVPNTAALYAQEAGQLPLSSSFNGELLLGGPGD
QSLPQKALLRASLSVSPADYPERPEVHSRRESSCNTLSTKTEVPIHLVSTTNQLHKQGGV
QQQIPTKLAALSKGKEKSGKGKSSHRTESLASVDMKQTLPIRLSARDSEGNLKARRPVSP
HQQPLQPQPSHSDSPSPPDGYVDAQASLAILKTQNQNVQHTLQYAVSDEAAKEDVIFF
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttgtttgctataagaacgtcagagttccaggattttccaggaccagagcaa
gatgaggattcagaaatggagagcattccgattttagtccggtccatgtccacgtcacgc
aggcacagctctgatatgccactgtctccgattgacctgggaagaaggttcagtttagac
accactggtattgacagcgatggggaacaagagatgcgatgtctccaaagttcccattta
ccatcttcctccttctctgagagttcagtcgaggagacgcctggtgccatcgaaactgaa
agccttgaaacagctaagccacccgattcaggaaagacggtgtattccagatccgagatt
ctcgccaccgaagaaaagtctcaggctgacagggtctctcgcatactggaaacatctcag
caggctgccagagaggccggagaggatcaggagactgaagaagggctgcagtctgtggat
ggacgatgtcacgtgctgatggtacagaaagttcttcaagagcttaaacagtatcacgga
acttcaagcacagataggaaagaattttctggaaatgttacgtggtatgaatttctctcc
aacgataaaaacgatgatgaagaagaggaacgaccagaacgttcagaaaaagggaccaaa
gtcaagcgcaccctcagctctttgaagaaccgaatgactggatccttcaacaaagataaa
ggtaagacccgtgagagagagcagcacaaaagcacagagaaagagttcaaagagcacaag
aaggtgcggcgtgtcagcgtcagtgggcaccagctagtgcccggctccttttccagctgg
gcgaggtgttcactgtgcagcaagagtctgcagcgaaagcatggcctgcagtgtttgaac
tgtgccgtgaacgtccataagagctgcaggaccctgttaccggagtgtagcagtaaaggc
aagactaaagattcagtacagaagatatcgacctctgccactcagtcaagtaatcaagct
ctgagggagaccagctccaccctgacgctcgccgccgatggctcgtcccgaaaggctcgc
tgcgcttcaggaatgaccgtttcgcctaaaggacacagcgcccaaccagccgcctccagc
aatcatacagccaaccagaacagcagcagcagcagcggctctgtcgcaggagatatggac
gaggtggatgcattcaggatgaagcgccccgctgacgacaccgtgtctctcgtctcctca
acacccgagtcgctcatcgtggaagatgcatattacaccactttgcggggcgagctggac
tccatcgcgcaggactttgaagtagagtcctggagtctggccgtggataacaacttcttg
aagaagcattcgaaggaaatgaccaagagacaggacgttatatacgagctcattcagacg
gagatgcatcacatgaggacgctgaagatcatgcagcgcgtgtacgcccgagagctgcgc
gaggccttacagatggacgacaagaggttggactgtctgtttccgcagctggacagcctg
ctagagctgcacagtcacttcctgtcccgcctcagggagcggcgcgctgagtccctgcag
acgggcagcgaacgcgattacgccatcaaccaactctcagacatccttatatcccagttt
tccggagagcttggagaacgaatgaaagactgttacggcgatttctgcagtcgccacact
gaagcagtcaactattacaaagaacaacttcagagcaacaagaagtttcagaacctcatg
aggaaaataagcaatctgtcaatcgtgcggcggttgggcgttccagagtgcatcctgctg
gtgacgcagcgaatcaccaagtatcctgttttagtggagcgaatcctgcacaatacagaa
gctggcacagaggaacatgaaggtctggcagaagctctctgtctgatcaaggacgtcatc
gtgcaggtggactctcaggtcaacctctacgaaaaggaagctcggctccgagagatctcc
tccaagatggaacccaagcctctgggaaagatcaaggacggatgttttttccgcaaggag
gatctgtgccagggccgtcgcaggctgctgaatgaaggcacggtctactggaaagccgcg
tccggtcgactcaaagatattctcgctctactgctgactgacgttctcgtcttattgcaa
gagaaggatcagagatacatgttctctaccgtggacaacaagccgtccgtcatttccctg
cagaagctgatcgtgcgggaggtcgctcacgaggagcgggccatgttcctcatctgcgcc
tcctctaaccgacccgagatgtacgagatccacacggcctcgaaagaagagcgcaacaca
tggatcacgcacatccgacaggccgtggaaagctgtccacatacagaggagaggctgttc
agtgaggaagtggaggccagggtcgctcgattccgagagtttcatgaacggctgatgttg
aaggacgctgagatcgctcatagcctcacagataaactgcagttattctcagatctggtc
gaatctgtggccggtgtggaagacggcagtcatcgctcacgtttgctcctgcggggcgaa
gcctcggaagtccagcagggggagcagctcctcaaaggagccatcaccgaagtggagaac
cttcagaacctcctggcatccggtgtgaaggaaacatctcctcagactgaaggaaaccag
agtccagggttgagcatgcttcctcgcagggccgacaccttcggtggctacgacagcgct
cctaaaattctgcctaaaaacggtagtataaagaagaaggtctccggagcggcaagcagg
tccagggatcgcagtgaacgggccagctcagacccgcagatcaaagaggtctatacctgt
caaatccaggaagagctggatgagacctcatcacccggctgccacaaaaaatcaaccttc
agatttccacaagcagagttctacgagcgagtcctcctgctgtctcagcggctctacagt
ttacaggccattgtcgctcagcaggacagtcacatcgagctgcagcgggcctctctcctc
accgccgaacgggagcgttctggcggccggagccgcggcacagatgtgctcctcgagcag
gagaaacaaaggaacctggagaagcaccgcgaggagatggccaattttcagcgtctgcag
agccagcacagacaggagcaggcccgctgggagcgggagcgcgagaggcagagacggcag
accgaggcggcagaacggaagctgaaggagaaagaggaagaatgcagacggctggaagcc
cggctagccgaggagagacaggagctggaacgacagaagcagacataccagcaggacctg
gagcggctgcgggagtcaacaagagcggtggagaaagagagagagagacttgaacagcag
aggaagctgagaaagcacaacacggtgccgaacactgccgcgttatacgcacaggaggct
ggccagcttcctctctcctcaagctttaacggcgagctcctgctcggtggaccaggggac
cagtcgcttcctcaaaaggcgctcctgcgggcctctctctcagtatcccctgccgactac
ccagagcgtcccgaggtccactcgcgccgagagagctcctgcaacaccctgtcgacgaaa
acggaggttcccatccacctcgtcagcaccaccaaccaactgcacaagcagggcggagtc
cagcagcagatccccaccaaactcgccgccctcagcaagggcaaagagaagagcgggaag
ggaaagagttcacaccgcaccgagagcttggcctctgttgacatgaagcaaacactgccc
atcaggctgtcagcacgagattcagaggggaacctaaaagcacgccgccccgtcagcccc
caccagcagccccttcaaccccaaccgtcacactcagattcccccagccccccggatggc
tacgtggacgcccaagccagcctcgccattctcaaaacccaaaaccagaacgtccagcac
accctccagtacgctgtgagtgacgaggccgccaaggaagacgttatctttttctga
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