Triplophysa rosa: 130549272
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Entry
130549272 CDS
T09216
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
tros
Triplophysa rosa
Pathway
tros04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130549272 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130549272 (rubcn)
Membrane trafficking [BR:
tros04131
]
Autophagy
Other autophagy associated proteins
Others
130549272 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
PFam54_60
RecO_C
Motif
Other DBs
NCBI-GeneID:
130549272
NCBI-ProteinID:
XP_057182476
LinkDB
All DBs
Position
LG25:complement(3185325..3203669)
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AA seq
942 aa
AA seq
DB search
MEISMESEEGERRWEHWKLLSNLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMNNILGHGL
KHEQVYYKQKDYWRFVWCVRYLCPHLARHVEQFSQLEPVLSSGMQCFGEGYKAERWLLHS
LQSHILSAQLKPLLQHRANIQKYYNDGAFLLSEPHVCAMFQCLEAVEQNNPRLLALIDTV
RLSHLKESPSLGLLKSQSMCLLPGVTGSWKTADDSQCRRLTEIPCTPHSTNSSDSLPSSS
TQGAPWVCGRNQSPPDTGIPHIAFTEPTSPAPADIRDCAEADLDDGPEYLAIGNLGKRRR
QDSSSSTQSSEHPEAKGSTHMALAPPPARRCSFSEAQKNMGRSSKGHIRSLSDTGISHKQ
KNGEGHRKITIIIEDPVAESVMDTPCSKSCGPFSPQISDSSTHSSLYMESNGFQDTSIPD
GLFRRPSEGQSLISYLSEQDFGSCADLEKENAHFSICESLIAAIELMKCNMRRPQEEAEE
EGDSDSEIQQLKQKIRLRRQQIRRSRLQPSTAASHHGVPSVDSAGSRRSSQDSFHPSDSG
SDREVEDIELRDGSEGQSLLAVSQSGLSLSLASLFSDADIKRSVTSSSRSFLSSESISPS
MLQSNSAETVAMGLLRQFEGMQLPAASELDWLVPEQDAPQKLLPIPDSLPISPDDGEHAD
IYKLRIRVRGNLEWAPPRPQIIFNIHPAPKRKVEVTKQNYRCAGCGTRIDPDYIKRLRYC
EYLGRFFCQCCHENAQALLPGKILRKWDFSKSYVSNFARDLLAKIAGDPLFNLHDINSTL
YKKMKALDTVRALREQLNHMKNLLKTCRLAKEVLDQFDMLPGHLTEDLHLFSLNDLTAVR
SGSLAPRLRDLLRLGSSHVTDCVLCQAKGFICEFCGNDKDIIFPYELNKCLRCDDCRACY
HKTCFKCGKECPRCKRLAVRRERMARKNMEEQEDGEQEASGT
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatcgatggagtcggaagagggcgagcgcagatgggaacactggaagcttctg
tctaatctgaagaccaccgttgaagggctgctgtcaaccaacaatcccaatgtgtggtct
cgctatgggggtcttcagcgtctgcacaaggacatgaataatatcctgggtcatggcctg
aaacatgaacaggtttactacaagcaaaaagactactggcgtttcgtgtggtgtgtgcgg
tacctctgtcctcatctggcccgtcacgtagaacagttcagtcagttggaacctgtgttg
agcagtggcatgcagtgtttcggggagggttataaagctgaacgctggctcttacacagt
ctacaaagtcacatcttatctgcacagctcaagccgctactgcagcacagagcaaatata
cagaaatactacaatgatggggccttccttttgagcgagccacacgtgtgtgccatgttc
cagtgtctggaggcggtggagcagaataaccctcgcctgttggccctcatcgatactgtc
cggctttcgcacttgaaagagtctccatccctgggtttgctgaagagtcagagtatgtgt
ttgctgcctggggtgacaggaagttggaaaactgcagatgactcgcagtgccgcagactg
acggagattccctgcaccccacactccaccaacagctcagattctttgccgtccagcagc
acgcagggggctccatgggtgtgcggacgaaatcagagccccccggacacgggaatacct
cacatcgcctttactgaacccacctcaccggctccggctgatatccgcgactgtgcggaa
gcggatctggatgacggtccagaatatcttgctatcggtaatctggggaagcgcagacgg
caggactcatccagctccactcagagcagtgaacacccagaagcaaagggctccacccac
atggctttggctccacctccagcacgacgttgctctttctcagaggctcagaagaacatg
gggcggagctccaagggacacatacggtctctgtccgatacaggcatctctcacaaacag
aaaaatggagagggtcacaggaaaatcaccataattatcgaggaccctgtcgcagaatcg
gttatggatacaccgtgttcgaagagctgtggtccgttctcacctcagatcagtgacagc
agcactcacagttctctctacatggagtctaatggtttccaggacaccagtatcccggac
ggtttattccgcagaccctccgagggccagagtctgatcagctacctctcagaacaagac
ttcggcagctgtgctgatctggaaaaggagaacgcccacttcagtatctgtgagtctctg
atagccgccatcgagctgatgaagtgtaacatgcgcaggccgcaggaggaggcggaggaa
gagggcgatagcgactccgagattcaacaactcaaacaaaagatccgcctgcgcagacaa
cagatacgacgcagccgactgcagccctcgactgctgcttcacatcacggtgttccatct
gttgacagcgccggctcacgtaggagttcccaggattcctttcacccctctgactccggc
tcagatagagaagtggaggacattgagctcagagatggcagtgaaggtcaatccctgctg
gcggtatctcagagcggcctgtccctgtcgctcgcgtccctgttttcagatgcggatatc
aaacgcagtgtgacatccagcagtagatctttcctcagttcagagtccatttctccatca
atgctacagtctaactcagccgagactgtagctatgggtctcctccgacagtttgagggc
atgcagctgcccgctgcctccgagctggactggctggtccccgaacaggatgcccctcag
aagcttcttccaataccagattctcttccaatatctcctgacgacggcgaacacgcagac
atttacaaactacggatccgggtccgagggaatctggagtgggctcccccgagaccacag
atcatcttcaacattcatccggctccaaagaggaaagttgaggtcaccaagcagaactac
cgctgtgctggatgtggcactcgaatcgatccagactacatcaagcgtttgaggtactgt
gagtatttgggccggttcttctgtcagtgctgtcatgagaacgcacaggctctgctgcca
ggaaagatccttagaaagtgggacttcagtaaaagctacgtcagcaactttgctagagat
ttacttgccaagatcgctggagaccctctcttcaacctacatgacatcaacagcaccctg
tacaagaaaatgaaagccctggatacagtgcgagcactgagagaacagctaaaccacatg
aagaatctcttaaaaacttgtcgtttggctaaagaggtgttggatcagttcgacatgctt
ccaggacatctgacagaagacttgcacctcttttctctcaatgacctcaccgctgtacgc
agcggcagcttagccccgaggctacgagacctgctccgccttggctccagccacgtcaca
gactgtgtgctctgccaggccaagggcttcatttgtgagttctgtggaaacgacaaggac
attatcttcccctacgagctgaacaagtgcctgcgttgtgatgattgtcgtgcgtgctat
cataagacctgtttcaagtgtgggaaggagtgtcctcgctgtaagagactggcagtgaga
agggagcgcatggctcgcaagaacatggaggaacaggaggacggagagcaggaggcaagc
gggacctag
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