Triplophysa rosa: 130549279
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Entry
130549279 CDS
T09216
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130549279 (sox2)
Transcription factors [BR:
tros03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130549279 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130549279
NCBI-ProteinID:
XP_057182489
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Position
LG25:complement(2915371..2917464)
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AA seq
313 aa
AA seq
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MYNMMETELKSPASQPNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMGAGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQDQLGYPQHPG
LNAHNTAQMQSMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQGTPGMTLSSMGSVVK
SESSSSPPVVTSSSHSRAGQCQTGDLRDMISMYLPGAEVQEQNAQSRLHMSQHYQSAPVP
GTTINGTIPLSHM
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagtccccggcctctcagcccaacacgggtggc
acgggtaacaccaactcttcaggaaacaaccagaaaaacagcccggaccgggtcaagaga
cccatgaacgccttcatggtgtggtcgaggggacagaggaggaaaatggcacaggagaac
cccaaaatgcacaattcggaaataagcaaacgactcggggccgagtggaaacttctgtcc
gaaagcgagaagcgaccatttatcgacgaagccaagcgccttcgggcgctccacatgaaa
gagcacccggattacaaatacagaccccggagaaaaaccaagactctgatgaagaaggac
aaatacaccctgccgggtgggcttctggcaccgggtgggaatgccatgggtgccggtgta
ggggctggtttgggcgctggggtcaaccagaggatggacagctacgctcacatgaacggc
tggaccaacggaggctacggcatgatgcaagaccagctgggttacccgcagcacccgggg
ctgaacgcgcacaacacggcgcagatgcagtccatgcaccgctacgacatgagcgcgctc
cagtacaactccatgaccaactcgcagacgtacatgaacggctcacccacctacagcatg
tcctattcgcagcagggcacgccgggaatgacgctgagttccatgggctcggtggtgaag
tccgagtccagttcaagtcctccggtggtcacgtcgtcctctcactcccgagccggacag
tgtcaaacgggggacctgcgggacatgatcagtatgtacctgcctggggcggaagtccag
gagcagaatgcccagagcagactgcatatgtcccaacattaccagagcgcacctgtgccc
ggcacgacgattaacggcacgattcccttatcgcatatgtaa
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