Triplophysa rosa: 130549652
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Entry
130549652 CDS
T09216
Symbol
pkd1l2a
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130549652 (pkd1l2a)
04091 Lectins [BR:
tros04091
]
130549652 (pkd1l2a)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130549652 (pkd1l2a)
Lectins [BR:
tros04091
]
C-Type lectins
Others
130549652 (pkd1l2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
REJ
Ion_trans
GPS
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130549652
NCBI-ProteinID:
XP_057182956
LinkDB
All DBs
Position
LG1:complement(33192102..33214103)
Genome browser
AA seq
2445 aa
AA seq
DB search
MDYHNVLCLTLIFHAALVWSNGEDGLTCPEHQQALESYCYEFVGLQRSFLSAQAWCERGG
GHLAFIQNDETQQFLQKHLQTEQSWWIGLAPSSVNLTLDPAATDVLLSWLDGSDVSFSSW
LREPAQNASCGYIMRDSGFQWETTSNCSQELYFICEFESGRSLACADHNATLQCGSGQVI
EIDDSFYGRKTLHYCRSSRSPTHASPQQEECSWVDIVDTVSGNCHGLQVCQAAVDISSFG
EPCPTFGSYLSVEYHCKNALHLLMSKLAAVFDNVTITVKWLLHPFQGNLTCTLSAGDGHV
IENYSPDKMENVVHKYNRAGLYTVTVECSTSEWHVAAQKSILIQEPLGEFGTVRCYSLNQ
STDHSNCRALYNNPLNIEVQLDAGTNVTYKIQHGHTKLNSSSALNGLLRHNISLSPEVQL
QMGPGCHQLTIAALNEVTRTDRSASLNVCLMEPVEDLWAEVEFKPEKCPAYDLHVNVSLA
RGAPVLLHFLVSGTNPTFSEKHEMQYGGPQTFRISNTVPGAFNVAIRAANNFSVMETDAG
NVTVYCHNETNLKIIADPEVPVIGSSSVKLYVNGFDDENTIWTCNETCPCTTEVKGSTYE
IPESCLPPVYSFSLYTVFTKSNGYQQSATRCITVVPGNDIQLHINCSDCNPVNIADAVTL
QVECEDCQKVVWYFESTEDFTGLLRDCHSEAVQRPLIKQAEDVTSLTIDSEVLQKANHDI
TVVVYAVKDNLSGSAKYIVPVTSTSISETDSLPQTPSILNPPSCTISPVMGDVLSPFNIT
CPVDPSFCEAGPCTYCFKTDRGNFFYCGVEHAVESLYLPLGDERNNYILTVEITVTNAAG
VAVNSTVTTWVNNTVKPTIEDLQVLVSSQVSQLQQQGRLTGAALAQMFTSVSNRLNDALP
VQQDKSFKKELRQQMLQSMSVAISMEPPKNPAEVQMSADAVVGLTTQGDELTDTAQLQAS
SVLTNLSQSLVYLSHSAEEFSEQVLQAATPIIDGVSNILKVFSSRDEQSEISGHLLNTVG
NVQSALLAGKEVNQEPTILSTSVMGLYVNRLSVDGLQKQSFNIENRNSASFMLPSLGANV
LSAEEPVDVRMTSYKINPFSWCESEQISGSVGSLSLTKKNGSVIPVANLTEEIEILLPRT
EMENVNQTLLDLGNYSTVVINVTTPNISLVLRFEPSEDTSLHLLLGFQDYPNDTNYDAQT
QLPRDGKSEEERYTWVINPTEMPIEVGVYYLLVRPVVDAGVNFTKASVFVTTIAAQCLYW
DEMNGNWSRDGCRVGPRTTASITQCLCTHLTFFGSSFFVMPNVVDVSRTAELFANFVNNP
VVVCFVGAIFLVYLVVVVWARRKDIEDVVKVKVTVLEDNDPLAEYRYLLSINTGHRRGAS
TSSQVTVILQGAEGESEAHHLTDPDKPVFERGGLDMFLLTTPYSLGELQSIRLWHDNSGD
YPAWYVNKVMVQDLETGQKWHFLCNSWLAIDMGEGTLDKVFPVATEMDLKRFSNLFFMKT
AKDFRDGHIWFSVISRPPSSNFTRVQRVSCCFSLLLCTMLTSIMFWGIPTDPSEQTMDLG
QIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNARSRERTTELPSKQQSKIDPTKQGKTGR
VSPNQPPSPDNNHKEITPDTVIKDIKRIAQSLHKVMRRPVPKIEVDPGKTDINTLLSLVE
ETIRQHNRVGNEFYTDSSKKEQTLAVSLRYVNLQETSFCESPERSEKCIIYNQYLYKQLQ
NVERELRLLRPSSFSKPDSYSRAVLQVQGMKNLLEPHVSCSGGQHTRSSSPTEGSGADNK
KCCQKGLPWWFVFVGWFLVAATSGVSAYFTMMYGLTYGKERSIGWLVSMVVSFFESLFIT
QPLKVLGFAVFFALVLKNVDQEEYGDIAIDGALPSTDDPDAVRIARRNSTCSFYQPPPPT
DIEKMRNNMIKEQKVFALIREILIYVGFLWMLLLVAYGQRDPNAYYLTQHIRQSFSNGIS
ESMEQKDIFNWVKTSLLNNLFGQYPGFITDGNSKLVGNARLRQVRVRKDSCKTAKPMQHS
GVDCNGPYSWDSEDMGSYAPGWIQWNVNDSKTLFKPWRYQSQAKLRSNPVWGSVALYKGG
GFVVDLGSDQQNASRLLQYLYNNSWLDVYTRAVFVEFTVYNANVNLFCIVTLMFETTGVG
AFQDRSEVQSVHLYQSTGGFHVFIMASEAIYFLFILYYMFVQGKLMRQQKWAFFRSKWNL
LELAIIILSWSALSVFVKRTILGNRDIEYYQNNKDLFVSFSETAAADAVLGYLIAFLVLL
ATIKLWHLLRLNPKLHMITSTLQRAWADISGFIVVMTIMFLAYSIACDLIYGWRLYSYRS
LLQAGQTIIRLQLGIFNYDEVLDYNPILGAFLIGSCIIFMTFVVLNLFISVILVAFSEEQ
LHPTPSEEEEIVDLMLMKIYSLFGIKCKKKQIDNDDALTKASVIS
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atggactatcacaacgttctgtgtcttacactgatttttcatgccgctttagtctggagt
aatggtgaagacggtcttacctgcccagaacaccagcaggctcttgagagctattgctat
gaatttgtgggtctgcagcgtagttttctcagcgctcaagcttggtgtgagagaggcggc
gggcacctggccttcatccagaatgacgagacccagcaatttctccagaaacacctgcag
acagaacaaagctggtggatcggactagcgccttcttctgtcaatctcactttggatcct
gcggccacagacgttctcttatcctggctggatggctcggatgtcagtttttccagctgg
ctcagagagcctgcacagaacgcaagctgtggatacattatgagagattctgggtttcag
tgggagaccaccagtaactgcagccaggagctttattttatctgcgaatttgagtctggg
cgttcattagcctgcgctgatcataacgctacacttcaatgtggctctggtcaagtgata
gagattgacgacagtttctacggcaggaaaacgctgcattactgcaggagcagtcgcagt
ccgactcatgcatctccacagcaggaggagtgcagctgggtggacattgtagataccgtc
tcagggaactgccacgggctgcaggtgtgccaggctgctgttgatatctcatcctttgga
gagccgtgtccgacttttggaagctatttgtcagtggaatatcattgcaaaaacgctctt
catctgttgatgagcaaactggcagcagtttttgacaacgtcacgattacagtgaagtgg
ctgttacacccctttcaaggcaacctcacgtgcacattgagcgcaggtgatgggcacgtt
atcgagaattacagtccagataagatggagaatgtggtccataagtacaaccgtgctgga
ctgtacacggtcacggtcgagtgtagtaccagtgaatggcacgtggccgcccagaagagc
atccttatccaggaaccacttggagagtttgggaccgtgcggtgctacagcctgaatcaa
tccacagaccattcaaactgcagagcgctttataataacccactgaacattgaagtgcag
ttagatgcaggaacaaacgtcacctacaaaattcaacatggacacacgaagctgaattcc
tcttctgctctcaatgggcttttgcgtcacaacataagcttatctccagaagtccagctc
cagatgggaccaggctgccaccagctcaccatagcggctctcaatgaggtcacgcgcaca
gatcgatccgccagcctgaatgtgtgcttgatggagccggtggaggatctctgggcagaa
gtggaattcaagcctgaaaagtgtccggcttatgacctgcatgtcaacgtttctctggct
cggggtgctccagtgctgctgcatttcctggtgtctggaaccaatcccaccttttcagag
aagcatgagatgcaatacggaggtccacagactttccgtatctcaaacacagtaccaggc
gcattcaatgttgcgatcagagcagcaaataacttctcggttatggaaacagatgctgga
aacgtaacagtttattgccacaatgaaacgaatctgaagatcattgctgatccagaggtt
ccagtcattggctctagtagtgtgaagttatatgtgaatggattcgatgatgaaaacact
atctggacatgtaacgagacttgtccctgtaccactgaagtgaaaggcagcacatatgag
atacctgaatcatgtctgccacctgtctacagtttctcactatatactgtatttaccaaa
tcaaatggttaccaacaaagtgcaactagatgcatcaccgtcgttcctgggaacgatata
cagctacatataaactgctccgactgcaatccagtcaatattgcagacgctgttacactg
caggtggaatgtgaagactgtcaaaaggttgtgtggtactttgagagcacagaggatttt
actggtttgctaagggactgtcactcagaggcagtgcaaagaccgttgataaagcaggca
gaggatgttacctctctaactatagacagcgaagttctgcagaaagcaaaccatgatatc
acagtggtggtttatgctgtcaaagacaacttatctggatctgctaaatacattgttcca
gttaccagtacatccattagtgagacggattctcttccacagactccatccatcttaaat
ccgccctcttgtaccattagccctgtaatgggtgatgttctctcaccctttaatatcacc
tgtcctgtggatccatctttctgtgaagctgggccctgtacatactgctttaaaacagac
cgaggaaactttttctactgtggtgtcgagcatgcggtagagtcgctttatcttcctcta
ggggatgaacgtaataactacatcctgacagtggaaatcactgttacaaatgctgcaggt
gttgctgtcaactctactgtaactacatgggtgaataatactgttaagcccactattgaa
gatcttcaggtgcttgtttccagccaggtatctcagctgcagcagcagggtcgactcaca
ggtgcagcgctggcacaaatgttcacgtctgtatcgaacagactgaacgatgcgttgcct
gtccaacaagataaaagtttcaaaaaagagctgagacaacaaatgttgcaaagcatgagt
gttgccataagcatggaaccccccaagaacccagcagaggttcagatgagtgctgatgct
gtcgtaggcctcacaacacaaggagacgagttaacagacactgctcagttacaggctagt
tcggttctaacaaacctcagtcagtctctggtctatctgagccattctgctgaggaattc
tctgagcaggtgctacaagccgccacgccgattattgatggtgtcagtaacatccttaaa
gttttttccagcagagatgagcagagtgagatctccggtcatttattgaacacggtgggc
aatgttcagagtgccttgctggctgggaaagaggtcaaccaggagcccaccattctgagc
acttcagtgatgggtttatatgtcaacagattgtccgtagatggacttcagaaacaatct
tttaacattgagaacagaaactccgccagttttatgctcccatctctaggtgctaatgtt
ctatctgcagaagaaccggtagatgttcggatgacgagttataagataaatccgttctcc
tggtgtgagagcgagcagatcagtggatccgtggggtctctctctcttacgaaaaagaac
ggttctgtgattccggtggcaaacctcactgaggagattgagattcttttaccaagaaca
gagatggagaatgttaaccaaactcttctagatctgggaaactacagcactgtggtcatc
aatgtgaccacaccgaatatatctctggttttgaggtttgaaccttcagaggacacatct
ctgcacctgctcctgggttttcaggattacccaaacgacacgaattatgatgctcagact
cagctgcctcgagatgggaaatctgaagaggagaggtacacgtgggtgattaaccctacg
gaaatgcccatagaagtgggtgtttactacctactagtgaggcctgtagttgacgcaggg
gtgaatttcacaaaagcctcagttttcgtcacaaccattgctgctcaatgtttgtactgg
gatgagatgaacggcaactggagtcgtgatggctgtagggttggtcctcgtactacagca
tcgattactcagtgcctgtgcacccatctgacattttttggaagctcattcttcgtcatg
cccaacgtggtcgatgtgtctcgcacggctgaactctttgccaactttgtaaacaaccca
gtggtggtgtgtttcgtcggagccatctttctggtgtacctggttgtcgtggtgtgggca
cggaggaaggacattgaggatgttgtgaaggtgaaagtcacagtacttgaagacaatgac
cccttggctgaatatcgttacctgttaagcatcaacacggggcatcgccgtggagcctcc
acttcctctcaggtgacagtgattctgcagggtgcagaaggtgaaagcgaagctcatcat
ttgactgatcctgataagccagtgtttgaaagaggagggctggatatgttcttgttgacc
acaccgtactcactgggagaacttcagagcatcagactgtggcacgacaactcaggggat
tatcctgcttggtatgtgaataaggtcatggtacaggacctggagactggacagaagtgg
cactttctgtgcaactcgtggttggctattgacatgggagagggcacgctggataaagtg
tttcctgtagcgacagagatggacttgaaaaggttcagcaatctgttcttcatgaagacc
gcaaaagacttccgtgatggtcacatctggttctccgtgatcagtcgtccaccgagcagt
aacttcaccagagtgcagcgtgtctcctgctgtttctcactgctgctctgtacaatgttg
accagtatcatgttctggggcatcccaacagacccctccgagcagaccatggatctgggt
cagattgagttcacctggcagcaggtcatgattggcatccagagttcaatcatcatgttt
cccatcaacctcctcatcgtgagcatcttcagaaacgctcgttcaagagagcgaacgaca
gaactgccttcgaagcaacagtcaaagatagatccgacaaagcagggtaaaactggacgt
gtgtctccgaatcagccaccctctccagacaataatcacaaggagatcactccagacact
gtaataaaggacattaaacggatcgcacagtccctccataaggtcatgagaagacccgtt
ccaaagatagaagtggaccctggtaaaacagatatcaacactctattgtcactggttgaa
gagacaatacgtcaacacaatcgagtcggtaatgagttttacaccgactcttctaaaaag
gagcaaacgcttgctgtttctctgagatatgtaaatctgcaagagaccagtttttgtgag
agccccgagcgaagtgaaaaatgcatcatctacaaccaatatctctacaaacaactacaa
aatgtggagagagaattgagactgctcaggccttcatctttctctaagccggacagctac
agccgggctgtattgcaggtgcagggcatgaagaacttacttgaacctcacgtctcctgt
tccggtggtcagcacactcgcagctccagcccaacagagggcagcggtgcagacaacaaa
aagtgctgtcagaaaggcttgccctggtggtttgtgtttgtgggttggtttctcgtggcg
gccaccagcggcgtttcagcgtatttcactatgatgtatggcctgacctatgggaaggag
cgatccatcggctggctcgtttctatggtggtgtctttctttgaaagcctcttcatcacg
cagcctttaaaagtacttggatttgctgtcttttttgctttggtcctcaaaaatgttgac
caagaagagtatggagacattgccattgatggagctttgcccagcacagatgatcctgat
gcagtcagaatagcccggagaaacagtacatgtagtttctatcagcctcctccacccact
gacatcgaaaagatgagaaacaacatgatcaaagaacagaaagttttcgctctcatcaga
gaaattctaatttatgtcggcttcctgtggatgctcctcttggtggcgtacggtcagcga
gatccaaacgcgtactatctcactcagcacattcggcagagcttcagcaatggcatttca
gagagtatggagcagaaagatatattcaactgggtgaaaacatccttactgaataatctg
tttggccaatatccaggcttcattacggatggaaactcaaaacttgttggcaacgctcgt
ctccgtcaggtcagggtgaggaaagactcttgtaagactgctaagccgatgcagcactcc
ggtgttgactgcaacgggccatattcttgggattcagaggacatgggctcctacgctcca
ggctggatccagtggaatgtgaatgattcaaagactcttttcaaaccttggcgttatcaa
agtcaagccaaactcagatcaaacccagtttgggggagcgtggccctttataagggtgga
ggatttgtggtggacctgggctctgatcagcagaacgcaagcagactccttcagtatctt
tataacaactcttggctggacgtgtatacgcgggccgtgtttgtggagttcaccgtatac
aacgcaaatgtaaacctcttctgcattgtgactctcatgttcgaaaccacaggagtgggt
gcgttccaagatcgaagtgaggtacagagtgtccatctctaccagtctacgggtggcttt
catgtgtttataatggcatcggaggccatctatttcctcttcatcctttactacatgttt
gtgcagggaaaacttatgagacagcagaaatgggcgtttttcagaagcaagtggaatctt
ttagagttggccatcattattttaagttggagtgcattgtccgtttttgtcaagaggacg
atattgggtaaccgggacattgagtactaccaaaataacaaagacttgtttgtgagtttt
tcagagaccgccgcagcagatgctgtgttgggctatctgatagccttcttggttctgctc
gcaaccatcaagctgtggcatttgctcagactcaaccccaaactccacatgatcacctcc
acactgcaacgggcatgggccgatatctccggcttcattgtagtcatgaccatcatgttt
ctggcctattccattgcttgtgatttaatctacggatggaggctctactcgtacagatca
ctgctacaggctggccaaaccattatacgcctacagctggggatcttcaactatgatgag
gttttggattacaatccaattctgggtgctttcctgatcggatcctgcattatcttcatg
acgtttgtagttctgaatctcttcatatctgtcatcttggtggcgttcagcgaagagcag
cttcaccccacaccctctgaagaagaggaaattgtagacctgatgctgatgaagatctac
agtctttttggaatcaaatgcaagaaaaagcaaatcgacaatgatgatgccttgaccaaa
gcttcggttatatcataa
DBGET
integrated database retrieval system
