Triplophysa rosa: 130550019
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Entry
130550019 CDS
T09216
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
tros
Triplophysa rosa
Pathway
tros04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130550019 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130550019 (chrne)
Ion channels [BR:
tros04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130550019 (chrne)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
130550019
NCBI-ProteinID:
XP_057183340
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Position
LG2:18547075..18558980
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AA seq
518 aa
AA seq
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MAARFGRTCIVAFALVACTLLQVNGNEESQLIADKFKNYKKNIRPARHPEEKVKVQVKLT
LTNLISLNEKEETLTTNVWIEIQWSDYRLAWNTSEYHGIDLIRVPYNTVWLPDIVLENNI
DGKFDVAYYANVLISNDGSMYWLPPAIYRSTCAIEITYFPFDWQNCTLVFRSQTYSANEI
VMILAEDAETGKPIEWVDIDPEAFTENGEWAIKHRPARKLTNPRYSPDDLEYQEVYFNLI
IQRKPLFYIINIILPCSLISSLVVLAYFLPAKAGGQKLTVSISVLLAQTVFLILIGQKIP
ETSLSVPLIGKYLIFVMCTTTLIVTNCIIVLNFSLRSPSTHKMSHTIKHIFLEVVPRFLG
MASFLEEEGSGGGPYEMRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLMRTIVD
EIDISSTANLYKSLAKTAPEIKECVDACNFIAESTKQQNDIGSEMESWVLIGKVIDKVCF
WAAILLFSVGTVAIFLMGHFNQAPEYPFAWENKKYVPE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacggttcggcaggacgtgtatagtggcgtttgcgcttgtcgcctgcacttta
ttacaagtcaatggaaatgaggagtcgcagctaattgcagataagtttaaaaactacaaa
aaaaatattcgaccagcaagacacccggaagaaaaagtgaaggttcaagtcaagcttacc
ctcaccaatcttatttctttgaatgagaaagaggaaactcttactacaaatgtctggatt
gagattcaatggtcagattatcgacttgcgtggaatacatcggagtatcacggtattgac
ctgatccgtgtgccatacaacactgtctggctgccagatatagtattagaaaataacata
gatggcaagtttgatgtggcatactatgctaatgtgctgatttcgaatgatggctccatg
tactggcttccccctgccatctaccgcagtacctgcgctattgagatcacctacttccct
tttgactggcaaaactgcactctagtattcaggtctcagacatacagtgccaatgaaatt
gttatgatattggcagaagatgcagaaacagggaagcctattgagtgggtggacattgac
cctgaggccttcacagagaatggggagtgggcaatcaagcatcgccctgcccgtaaactg
acaaacccacgctattctccagatgatctggagtaccaggaagtgtatttcaatctcatc
attcagaggaaaccactcttctacatcatcaacatcatcttgccctgctctctcatctcc
tcgctggtggttctggcctactttctccctgctaaagctggagggcagaagctgaccgtg
tccatttcggtactgttggctcagactgtgtttctcatcctgattggtcagaaaattcca
gaaacttcactttctgtgcctctcattggcaaatatttaattttcgtcatgtgtacgacc
acactgattgtcaccaactgcatcatcgtcctcaacttctccctccgcagtcccagtaca
cacaagatgtcacacaccatcaaacatatttttcttgaggtggtccctcgttttctcggc
atggcctcatttctggaagaggaagggtcaggaggtgggccgtatgaaatgagagagagg
agacgcagttcgtttggactgatgcagagggccgaagaatacgtactgaaacagccacgc
agtgagatgatgtttgacaaacagagagagagacacggactcatgcgcacaatcgtggat
gaaattgatataagcagtacggcgaacctctacaagagtctggctaaaacagctccagag
ataaaagaatgtgtagatgcctgcaacttcattgctgaatccacaaagcagcagaatgac
attggatctgagatggagagttgggtgctgattggtaaggtgattgataaagtttgtttc
tgggcagccatcctgctattctccgttggcacagtggccattttcctcatgggtcacttt
aaccaggcacctgagtacccctttgcttgggagaacaagaagtatgttcctgagtaa
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