Triplophysa rosa: 130550088
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Entry
130550088 CDS
T09216
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tros
Triplophysa rosa
Pathway
tros03022
Basal transcription factors
tros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130550088 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
130550088 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130550088 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130550088 (gtf2h1)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130550088 (gtf2h1)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130550088 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
130550088
NCBI-ProteinID:
XP_057183435
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MASLSEEVLLVVKRVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKVQLQLVLHTGESSTFHFANVSTALKDRDATKELLQQLLPRFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLSSVDHSLSNNNKQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESIFRTYPTVKQKYAENVPHNLTEKEFWTHFFQSHYFHRDRLNTGQQ
DIFSECAKQDEKGLKSMVTQGVKNPMVDLLALEDKTLDEGYGTAAAPSTSNVTKTLRENS
NCAIIKRFNHHSAMVLAAGLRKVEACSDQTSETSSTDGNSRDSDLFQPPLKKVKLQEAIE
YDDLQSDCRRKPISLNLKKSDRYSHGPVPLQSQPYTSSQDILNSIGVIQHEMKSYKPRLT
QVMSSSAASSAITALSPGGVLMQGGSQQTVNRESAHVLHKHLYLQHLHSNASLSLSLSLS
LSNVELVPSDVQSELKHLYTAAGELLRHFWTCFPVNTLFLEEKVVKMQSNLERFQLTKLR
PFQEKIQRQYLSANLTGHLEEMLQAAYSKFQAWQSRRMTRKT
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtcagaggaggtgctgttggtggtgaagagggtccgtcagaggaagcag
gatggaactctgtatctgatggccgagcggatcgcctggggtccggaggggaaggaccgc
ttcaccgtcagtcatctgtatgctgacatccgctgtcagaagatcagtcctgacggcaaa
gcaaaggtccagcttcagttggttctgcacacgggcgaaagcagcacttttcatttcgcc
aatgtgagcacggcactgaaggacagagatgccaccaaagaactcctacagcaactcctg
cccaggttcaagaagaaagccaacaaagagctggaggagaagaacaggatgctgcaggaa
gaccccgttctgtttcagctctacaaggatttggtggtgagtcaggtgatcagcgctgag
gagttctgggccaatcggctgagcttgagttctgtagaccactcgctttccaacaacaac
aaacaggaagtgggcatctctgctgccttcctggccgacatcagaccgcagacggacggc
tgcaacggtctgcgctacaacctgacgtctgacatcatcgagtcgatctttagaacctat
cctactgtgaagcagaaatacgccgagaacgttcctcacaacctgaccgagaaggagttc
tggacgcacttctttcagtctcattacttccacagagatcgactcaacacgggccagcag
gacatcttctccgagtgtgccaaacaggatgagaaaggtctgaagtccatggtgactcag
ggtgtgaagaaccccatggtggatttgctcgctctggaggataaaacattagatgagggt
tatggcacagcggcggctccctccacctcaaacgtgaccaaaacactgagagaaaacagc
aactgtgccattatcaaacgcttcaatcatcacagtgccatggtgctcgccgccggcctg
cgcaaagtggaagcctgcagtgatcagaccagtgaaaccagcagcactgatggaaactcc
agagactcggatctcttccagccgccgctgaaaaaggtgaaattacaggaagccatcgaa
tatgatgatctgcagagtgactgccgccgcaaacccatttctctgaacctgaagaaatct
gacagatattctcacggtccggttcctctgcagtcacagccgtacaccagcagtcaggac
atcttaaactccatcggtgtcatccagcacgagatgaagagttataaaccccgcctgact
caggtgatgtccagcagcgcggcgagctcggccatcacggctctctctcctggaggcgtt
ctgatgcagggtggaagtcaacagactgttaaccgtgagtctgcacatgtactgcacaaa
catctttacctccaacatttacactccaatgcatctctctctctgtctctctctctctca
ctctctaatgtagagttagtgcccagtgacgttcagagcgagctgaagcatttgtataca
gcggccggagagctgctccgacacttctggacgtgtttccctgttaacactctgttcctg
gaggaaaaggttgttaagatgcagtccaacctggagcgatttcagttgactaaactccgc
ccctttcaagagaagatccaacggcagtatttgagcgctaatctcacgggtcatctggag
gaaatgcttcaggctgcatacagtaaattccaagcctggcaaagccgtcgaatgacgagg
aagacctga
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