Triplophysa rosa: 130550504
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Entry
130550504 CDS
T09216
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
tros
Triplophysa rosa
Pathway
tros03030
DNA replication
tros03410
Base excision repair
tros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130550504 (pole)
03410 Base excision repair
130550504 (pole)
03420 Nucleotide excision repair
130550504 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tros03032
]
130550504 (pole)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130550504 (pole)
Enzymes [BR:
tros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130550504 (pole)
DNA replication proteins [BR:
tros03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
130550504 (pole)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
130550504 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
130550504
NCBI-ProteinID:
XP_057183971
LinkDB
All DBs
Position
LG2:33162987..33182752
Genome browser
AA seq
2285 aa
AA seq
DB search
MVLQNSGRYKADRGGDQDNQQDDGSALSAVKRLERSQFTDTMDERFGFERMKEPGEKTGW
LINMHPTEILDDDRRMISAVDYYFIQEDGNRFKVALPFKPYFYVATKKNCEREVISFLSK
KFQGKVAKLEIIAKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVKREISPAVRKNREREK
SNDAYTSMLSSALVGGSVVTEDEDGSSKKMTEQLDNILDMREYDVPYHVRVAIDLKIHVA
HWYNVRYRGSAYPPEIVRREDLVERPDPVVLAFDIETTKLPLKFPDAEMDQIMMMSYMID
GQGFLITNREIVSEDIEDFEFTPKPEYEGPFTIFNEPDEASLIQRWFEHIHETKPNIFVT
YNGDFFDWPFVETRAAHHGLNMHREIGFQKDNQGEYKASHAIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLSYDPVELDPEEMCRMANEQPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHGNIVFPNKQEQVFNKLTEDGHVLDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAIEEEEKIPLEHVTNFNEVCE
EIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
NCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHVLNREEQARHEKK
RLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSS
AQDKGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKPKVTISYPGAILNIMV
KESFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFELISENRSMSRKLEDYGEQKSMSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWGYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAQQSLG
AGETPDMEDFGAPQRPLQPAILISTKRKRISQGEDSQLESQDQELTQSWREILGPPPAIG
SSREELLVWLRYHKKKWELQIRQRKERRKRRRLMAGESQPTGGGVIRDGPTTGLGSFLRR
TARSILDMPWQIVQIAETNHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQDEAATC
KKVNRILPRSSVSYFLYQYTVPEDMYQEHINEINAELSAPDIEGVYETQVPLLFRALVQL
GCMCMVNKQVVRNLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALFG
LFIPSQRKASVFVLDTVRSNQMPNLSTLYGAERTALLEKTTEDLLPPEKHLFEVRAENDI
KSIYRALQRILLNYKEERRGPTLIAVQSNWDLRRLASGMAVLGEFPVVPVHVIDEISFNV
LDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPQDISIFGSDLFLARHLRKHN
HLLWLSPTARPDLGGKEADDSRLVMESDERASMEINSQGCYSTVCVELDIQSLAVNTILQ
SQHVNDMEGGASMGVSFDVIQHASLEEMMSGNQGANMVASYDETALCSNTFRILKSMVVG
WVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLGS
SVIYGNFNRLLLCTKKRSINDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLLWMDPVN
YGGVKGNLPSSLHYGEDGDEKTKKKDEAKEDGSEDEEDEENGGEDEEQDGDVDDVEDLIE
SNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMRQELRRNAPGATPIKRRGGSQVSQQP
TGDVSALPGLITFSQEYVSSELTQNFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHLPL
NNPALEFIKYVCQVLSLDSNIIIQMNKLKRDLLRLVDVGEFSEDAQFRDPCKSYILPEVI
CHHCNFCRDLDLCKDPAVAQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMSYALQ
DLECAKCKGVKEANMPLYCSCAGDFQLAFTTKSFTEQVDVFRNIAAHYNMNFLLETIDWV
LSMNS
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggacggtataaagcagaccgaggaggggatcaggacaaccag
caggatgatggatctgccctgtccgctgtcaaacggctggagcgcagtcagttcaccgat
acgatggacgagcgcttcggctttgagcggatgaaagaaccgggggagaagactggctgg
ctgatcaacatgcacccgaccgagatcctggatgatgacaggagaatgatcagtgcggtg
gactactacttcatacaagaggatggaaacagatttaaggttgcccttccctttaagcca
tatttctatgtagctactaaaaagaactgtgagagggaggttatctcctttttgtcaaag
aagttccaagggaaagtggcgaagcttgaaattattgccaaagaagacttggatctgccg
aatcatcttgtgggactgaagaggaactacattaagctttctttcaacacggtggatgac
cttgttaaagtcaaaagagaaatctcgcctgctgtccgtaagaacagggagagagagaag
tccaatgatgcttataccagcatgttgtccagcgctctggttggtgggagtgttgtgacg
gaggatgaggatggttcatcgaagaagatgactgaacagctcgacaacatcctagacatg
cgggaatatgatgtgccttatcacgttcgtgtggccattgaccttaagattcatgtggct
cactggtacaatgtgcggtacagaggaagtgcttatccacctgagatcgtgcgcagggaa
gatcttgtagaaagacctgatcctgttgtgttggcatttgatattgagaccaccaagctt
ccactaaagtttcctgatgctgaaatggaccagatcatgatgatgtcatacatgatagac
ggacagggcttcctcatcacaaaccgagaaattgtctcggaggacattgaggattttgag
ttcaccccaaaacctgagtacgaaggccccttcactatattcaatgagcctgatgaggcc
tctctcatccagagatggtttgaacacatccatgagaccaagcccaacatctttgtcaca
tacaatggagacttctttgactggccgtttgtggagacccgggcggctcaccatggcctg
aatatgcatcgggagatcggtttccagaaggacaatcagggggagtataaagccagccat
gccattcatatggactgcctcaggtgggtgaagagagacagttacctgcctgtaggaagt
cataatttgaaggctgccgcgaaagccaagttaagctatgaccctgttgagctggaccca
gaggagatgtgccgtatggccaatgaacaaccacagactctggccacctactccgtgtct
gacgctgtggccacatactacctttacatgaaatatgttcaccccttcatttttgccctt
tgcaccattattcctatggaacccgatgaggtcttgcgtaaaggatccggcaccctgtgt
gaagccctgctgatggttcaggcgttccacggcaacatcgtcttcccaaacaaacaagag
caggtgtttaacaagctgacggaagacggccacgttcttgactcggagacatacgtgggc
ggccacgtagaggctctggagtcgggagtgttccgcagtgacatcccctgccgctttaaa
atgaatccagcggcgtttgacttcttgcttcagagggtggagagaactcttcgtcatgcg
atcgaggaagaggagaaaattccactcgagcacgtcaccaacttcaatgaggtgtgtgag
gagataaagaagaagctgatatctctgaaggaagtgcctaacagaatcgagtgtcctctt
atttaccatctggatgtgggggccatgtaccccaacatcatccttaccaacagactacag
ccctccgcgatggtggatgaagccacctgcgccgcttgtgattttaataaaccgggtgca
aactgtcagcgcagaatggcgtggcagtggaggggcgagatcatgccggccagtcggagc
gagtttcatcgcattcagcaacagctggagtcggagaagtttccacctctttttcccaac
ggccctcctcgagcgttccacgtgctcaaccgagaggagcaggcgcggcacgagaagaaa
cgattgggagactactgcagaaaagcttacaaaaaagttcatctaaccagactggaggag
agagtcactaccatctgtcagagagagaactcgttttatgtcgacacggttcgagctttc
agagatcggcgatacgagttcaaaggcctccacaaggtgtggaagaagaagctgtcttca
gctcaggataaaggggacgcggcagaggtcaagcgctgtaagaacatggagattctctac
gagtctctacagctggcacacaagtgcatcctcaactccttctacggatacgtcatgaga
aaaggggctcggtggtactcgatggagatggcagggatagtgtgtttcactggagccaac
atcatcacccaggccagagagctcatcgagcagatcgggaggcctctggagctggacact
gatggcatctggtgcgtccttcccaacaccttccccgagaactttgtcatcaagtctaca
aacgaaaagaaacctaaagtgaccatcagttatccaggagctattcttaatatcatggtc
aaggagagcttcaccaatcatcaatatcaggagctggtggacccggcatctctaacatac
gagaccagagctgagaacagcatcttctttgaggttgatgggccgtacctggctatgatc
ctacctgcctccaaagaagaaggcaagaagctgaagaagaggtacgcagtgtttaatgag
gacggatctctggcggagctgaagggttttgaggtgaagagaagaggtgaacttcagctc
atcaagatcttccagtcttcagtgttcgaggctttcctgaaaggcacgacactagaagag
gtttacgcctctgtggccaaagtggccgactactggctcgacgtgctttacagcaaggct
gctaacatgccagacgccgagctattcgagctcatttcggaaaaccgctccatgtcacgt
aaactggaagattacggagaacagaaatccatgtccattagcacggccaaacgtctcgcg
gagttcctcggagatcagatggttaaagacgccggtctcagctgtcgatacgtcatctcc
cgtaagccggaggggtcacctgtcaccgagagggcgatccctctggccattttccaggcc
gaggaaagtgttaaaaagcatttccttcgcaaatggctgaagatgcccagccttcatgat
cttgacatcagatctattctggactggggttactacattgagcggctgggtagtgccatt
cagaagatcatcactattcctgcagctctacaacaggtgaaaaatcccgtacctagagtc
cgccatccagactggcttcataagaagcttctggaaaagaatgacatctacaaacagaag
aaaatcagcgagctgtttaccagtgaaggaaaaagacaggtggcccaacaatctcttgga
gcaggtgagactcctgatatggaggattttggggctccccagcgccccctgcagcccgcc
atactcatcagcactaagaggaagaggatttcacagggagaggacagccagctcgagtca
caggaccaggagctcactcagtcttggagagaaatactcggaccaccgccggcgattggt
agcagtcgggaggaacttctggtctggctgcgctaccataagaaaaaatgggagctgcag
attcgccagaggaaggaacgcaggaagcgacggcgtttgatggccggggaatctcagcca
accggaggtggagtcatccgtgatggaccgacaacaggcctcggtagcttcctgcggagg
accgcccgcagtatactagacatgccctggcagattgttcagattgcagagaccaatcac
ccaggactttataaattgtgggcggtaatcggcagcgacctgcattgcatgaaactcaac
atcccacgagtgttttatgtcaatcaaagagtgccaaagcaagatgaggcagctacctgc
aaaaaggtgaaccggatacttcctcgctcgagtgtgtcttatttcctgtaccagtacaca
gttcctgaggacatgtaccaggaacacatcaatgagatcaatgctgaactctccgctcct
gatattgagggtgtatatgagacacaggttccactgctgttccgggctctggtccagctg
ggctgcatgtgtatggtcaacaaacaggtggtcagaaacctggctggcagagaagcggac
acttttgacctggaacatctagagatgaggtctttggcccagttcagctaccttgagcca
ggcagcgtaaggcacatttacctgtaccatcacagtcagggtcataaagctttgtttggc
ctcttcataccctcccaacgcaaagccagcgtgtttgtcctcgacacggtacgcagtaat
cagatgccaaacctgagcacgctgtacggtgcagaacgcacggcgctgctggagaagacc
accgaggaccttctgccccctgaaaaacatctgttcgaagtccgtgctgaaaacgacatc
aaatcaatttatcgtgctctgcagcgtattctgctcaactacaaggaggagcgccgcgga
cccactctcatcgccgttcagtctaactgggatctccggcgtctggcttccggcatggcg
gtcctgggggagtttcctgtggtgccggttcacgttattgacgagataagctttaacgtt
ctggactggcagcgtcacggggctcgtcgcatgattaaacactacctcaatctggacagc
tgcctgtcgcaggcttttgatatggccaggtattatcacttacctgtcggaaacctgcct
caagacatttctatttttggatcggatctatttctcgcgcgtcatttgaggaagcacaat
cacctgttgtggctgtcgcctacggcacgtccggacctcggggggaaagaggctgacgac
agcagactggtgatggagagtgatgagagggcatccatggagatcaacagccagggttgc
tactccacagtttgcgtggagttggatattcagagcttggcggtcaacaccattctacag
tcccagcatgtgaacgacatggagggcggggccagcatgggcgtcagcttcgatgtcatt
cagcacgcgtcactggaggaaatgatgtcagggaatcagggggcaaacatggtagccagc
tacgacgagaccgcgctctgctccaacacattcaggattcttaagagcatggttgtcgga
tgggttcgagagatcacgcagtatcacaacgtctacgccgataatcaggtgatgcatttt
taccgctggctgagatctcccagttcactcctgtatgacccggcgcttcatcgcactctt
ctcaacatgatgaagaagatcttcttacagctcgtggcagagtttaagcgtctggggtca
tctgtgatctacggaaatttcaaccggctcctcctctgcaccaagaagcgaagcattaat
gacgccatcgcatacgtggagtacatcactaacagcatacactcacgggagatcttccac
tctctgtccatcacattctcacgctgttgggaattcctgctgtggatggacccggtgaac
tacggaggagtaaagggaaacctgccctctagccttcattatggcgaggatggcgatgaa
aagacaaaaaagaaagacgaagcgaaggaggatggaagcgaggatgaggaggatgaagaa
aacggaggtgaagatgaggaacaggatggcgatgtggatgatgtcgaagacctgattgaa
agtaactggaacatcatgcagtaccttcctcagacagcgtcgtgtcagaagtacttcctc
atgatcgtctcggcctatatcgctgctgtctatcacagcatgaggcaagagcttcggagg
aatgcccctggtgccacgcccataaagaggcggggcgggtcccaggtatcccagcagcct
actggggatgtcagcgcacttcctggtttgatcacattttcccaggagtacgtgtcaagt
gaactgacgcagaacttcttcaccataactcagaagattcagaagaaggtgtcgagcacc
cgcagcgtgacgctgccatccgagatgtttcccgttcttcctggttctcacctgcccctc
aataacccggcgctggagttcatcaagtacgtctgtcaggtgctttctctggactccaac
atcatcattcagatgaacaaactgaagcgcgatctgctgcgattggtcgatgttggtgaa
ttctcggaggacgctcagttccgtgacccctgcaagtcttacatcctgcctgaggtcatc
tgccatcactgtaacttctgtcgtgacctcgacctctgcaaagaccccgcggtggcccag
gacggttcagttcttcctcagtggttttgttcgaactgccaggctcagtatgaaaccgag
tccatagaaatggccctggtggaggcgttacagaagaaactcatgagttacgcactacaa
gacctggaatgtgccaaatgcaagggagtgaaagaagcaaacatgcccctgtactgcagc
tgcgctggagacttccaactcgccttcaccacaaagagcttcactgagcaggtagacgtt
ttccggaacatcgccgcccactataacatgaacttcctgctggagaccattgactgggtg
cttagtatgaactcatag
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integrated database retrieval system
