Triplophysa rosa: 130550622
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Entry
130550622 CDS
T09216
Symbol
wrn
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tros03032
]
130550622 (wrn)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130550622 (wrn)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130550622 (wrn)
DNA replication proteins [BR:
tros03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130550622 (wrn)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
130550622 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
130550622
NCBI-ProteinID:
XP_057184107
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MGDRNLPAWMNNKSHQDKHTLGAYKKNVLEDSLPYLEFSGTVVYSQETHDCSFLSEDLRS
CLSCDSVVGFDVEWPPSFTKGKSRKVAVVQLCASEEKCYLFHISSMSGFPPGLKAFLEDE
SIVKVGVGIQGDKWKLLSDYDIKLKNVLELSDLANNTLRCSEKWSLDGLVKHLLKNQLYK
DKQVRCSQWDDFSLTEEQKRYAATDAYAGFLIYNKLHVMMESERWTCSAAELKQRVYQMS
GDLRDLADGFPEDVSCSSRAVKLLDDLAHTLQSLRSCLLKSDGAADDTGQKSDTQCVMSE
DERQMLEMQARQEQMDEECILAFQTREQSAQNERDEDLDDEMMKCADDVEKENDGHKQSA
AEDEDEDVEEDEEEVFDSDIPQAEQIKCLKMYFGHHNFKPVQWKVIQSVLEDRRDNLVVM
ATGYGKSLCFQFPPVYCQNISVVISPLIALMEDQVLHLQMSNIPACFLGSAQTRNLSEDV
KRGQFRVVYMTPEFCSGNIPLLAQLHSTIGLSLIAVDEAHCISQWGHDFRSAYRDLGKLK
KNLPEVPILALTATASPSIRDDIVKSLHLVNPIMTCTSFDRPNLYLDVSRKSADVIQDLK
QFLIKKKGGGLELEGSTIVYCPSKKEAERVTAALCKLGISCGLYHAGLSIKRRRETQHQF
MRDEIQCVVATVAFGMGINKSDIRKVIHYGAPKEMESYYQEIGRAGRDGLSSSCNVLWTS
ADMALNRFILNQSRSERFRDYKISMMAKMEKYLNSTKCRRKLILSHFEDKRLRKVTSGIL
GSDRCCDNCRSGVKEGDADGLQQDFGLCSYQLMKAIRIMEERFGITAPILFLRGSNSQRV
PDRYRKHSHFGIGKDISECWWKALGRELIAEQYLMEATGHNKFATLCKLTQKGRSWLNDA
ENEKHRKLLLQPNRDLYSRVSVPRRTSHVAPVESNTSSKQSDFTQRSKVSSGVDSRHMME
KVGVSCRSSARQSLSSHTPVVKTQTPAVSPREIQLQSELYGKLVCERQKLASLKNIPPAL
LATNKILLDMAKIRPWTVSSLKQLDGVSEAKAAMLTPLIDIINTFCHTHTLQVDVSSSSV
ADVQSESSRDSVCRSLPDSVSVTHRLFQTEHKTLRQVADVRSVPLAVVESHLLQAQKMNC
PIDTERAGLSPSIYNTITNIITSPPLSSDMSDFKAIRCRVSDDISNFLLRLAVCKLQREG
LSSVRQDISWIEPLDKSRRAGDGVMEESHRESEVMDQSEDELFIDLPMPQEDMGSDSDGR
LKSCDVTPHSSGMNLTSWNQDNLDQDTQDLFSDSPAETVSQPAKRKLPDWTEGPNTCVTA
AAVKKSKKKKGLFI
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagaaatctgccagcatggatgaacaataaatcccatcaggacaaacacaca
ttaggagcatataagaagaatgttctggaagattctcttccttacctggagtttagtgga
acggtcgtgtacagccaggaaacacacgactgctcatttctgtcagaagatttgagatca
tgtttgtcgtgtgattcagtggtgggctttgatgtggaatggccgcccagcttcactaaa
ggaaagtcaaggaaagtggctgtggttcagttgtgtgcgtcagaggagaaatgttatctg
ttccacatctcctccatgtcaggctttccgcccggcctgaaggcctttctggaagatgag
agcatcgtgaaggtcggtgtgggaatccagggagacaagtggaagttattatccgattat
gacattaaactgaagaatgtgctggagctttctgatctggccaataatactttgagatgc
agtgagaaatggagtctggatgggttggtgaagcacttgttgaagaatcaactttataaa
gacaagcaggtgcgctgcagtcagtgggacgacttcagtctgacagaagaacagaagaga
tatgccgccacagacgcttacgctggattcctcatttataacaaactacacgtcatgatg
gagtctgagcgctggacttgttcagccgctgagctcaagcagagagtttatcagatgtct
ggtgatctccgggatctggccgatggatttccagaggacgtgagctgctcgagcagggct
gtgaagctgttggatgatctcgctcacactcttcagtctctgagatcatgtttgttaaag
agcgacggagccgccgatgacacgggtcagaagtctgacacacagtgtgtgatgtctgag
gatgagcgacagatgctggagatgcaggccagacaggagcagatggatgaggagtgtatc
ttagcgttccagactcgagagcagtcggcccagaatgagcgtgatgaagatctggatgat
gaaatgatgaagtgtgctgatgacgtggagaaagagaacgacggacacaaacagtctgct
gctgaagatgaagatgaggatgttgaagaagatgaggaggaggtgtttgattcagatatc
ccacaagctgaacagatcaaatgtctgaaaatgtattttggccatcacaacttcaaaccg
gttcagtggaaagtgattcagtctgttcttgaggacaggagggataatcttgttgtcatg
gcaactggttatggcaagagtttgtgttttcagtttcctccggtgtactgtcagaacatc
agtgtggtgatttctcctctcatcgctctcatggaggatcaggtgcttcacttacaaatg
tcaaacattcccgcttgttttcttggatccgctcagaccagaaatctgtctgaagatgtg
aagaggggtcagttcagagtggtgtacatgacacctgagttttgctctggaaacattcct
ctgctcgctcagctccacagcaccatcggtttatctctgatcgctgtggacgaggctcat
tgtatctctcagtggggtcatgacttcagaagtgcgtatcgtgacctgggcaaactcaag
aaaaatctcccagaggttcctattttggctctgacggccactgcgagtccatctatccgt
gatgacatcgtgaagagtcttcacctggtcaatcccatcatgacctgcacctcgttcgat
cggcccaacctctatctggacgtcagtcgcaaaagtgctgatgttattcaggacctcaaa
caatttctcattaaaaagaaagggggggggctggagctggagggctctaccatcgtgtac
tgtccgtctaagaaagaggcggagcgtgtgacggcggcgctgtgtaagctgggcatctcg
tgtggactttatcacgctggtctgagcatcaaacggagaagagaaactcaacatcagttc
atgagagacgagattcagtgcgtggtggccacggtggcgttcgggatgggcatcaataag
tctgacatcaggaaggtgattcattacggagctcctaaagagatggagtcgtattatcag
gagatcgggagagccggtcgagacggtctgtccagctcatgtaacgtcttatggacgtct
gcagacatggcactgaaccggttcattctcaaccagtccagaagtgaacgcttcagagat
tataaaatcagcatgatggccaaaatggagaaatatctcaattccaccaaatgcagacga
aagttgattttgtctcattttgaagacaagcgtctgaggaaggtgacgtctggcattctg
ggtagtgatcggtgttgtgataactgcaggtcgggtgtgaaggagggtgatgcagacggg
ctccagcaggacttcggcttgtgttcgtatcagctgatgaaggccatcaggatcatggag
gagaggtttggcatcacagcgcccattctcttcctgcggggctcaaactctcagcgtgta
cccgatcgctatcgtaaacattcacactttggcattggtaaggacatctcggagtgttgg
tggaaagctctcggacgagaactcatagctgaacaatatctgatggaagctacgggtcac
aacaaattcgccaccctctgtaaactcacacagaagggcagatcgtggctgaatgacgct
gagaatgagaaacacagaaaacttctgctgcaacccaacagagatctgtacagcagagtg
tctgtaccgcggaggacgtcacacgtggcaccggtggagtctaacacttccagtaaacag
tcagatttcacacagaggtcaaaggtcagttctggagtggacagccgtcacatgatggag
aaagtgggcgtatcctgcagatcatcagcgagacagtcattatcatcacacactcctgtt
gttaaaactcaaacaccagccgtgtctcccagagaaatacaactgcagtcggagctgtac
ggtaagctggtatgtgagcgtcagaagttagccagtcttaaaaacatcccaccggctcta
ctggccaccaataagatcctgctggacatggccaaaataaggccgtggacagtcagcagc
ttaaaacagctggatggagtttcagaagctaaagcggccatgctcactcctctgattgac
atcatcaacactttctgtcacacacacacattacaggtggatgtgtccagcagttctgtt
gcagacgtccagtcagagtccagtcgtgattctgtgtgtcggtctctacccgacagcgtc
tcggtcacacacagactctttcagacggagcacaagactctgaggcaggtggcagatgtt
cgctctgtgcccttggctgtggtggagtctcatctgttacaggctcagaagatgaactgt
cccatcgacaccgagagagctggactctcaccgtccatctacaacaccatcacaaacatc
atcacatctcctccactcagctcagacatgagtgattttaaagccatcaggtgtcgtgtc
tctgatgacatcagcaactttctgctgagactggcggtgtgtaaactccagagagaaggt
ttatcatctgtacgtcaggatatcagctggatcgagccgttggataaaagcagacgtgca
ggtgatggtgtgatggaggagtcacaccgagagtcagaagtcatggatcagagtgaagat
gagctctttattgatctcccaatgccacaggaggatatgggctccgactctgacgggcgg
ctcaagtcatgtgacgtgactccccacagcagcggtatgaatttaacctcctggaatcag
gacaacctggaccaagacacacaggatctcttcagtgattcacctgctgagacggtgagt
cagccagccaagagaaaactgcccgactggaccgaaggaccaaacacttgtgtaaccgct
gctgctgtaaagaaaagcaaaaagaagaaaggacttttcatttga
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integrated database retrieval system
