Triplophysa rosa: 130551034
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Entry
130551034 CDS
T09216
Name
(RefSeq) spatacsin-like
KO
K19026
spatacsin
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130551034
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130551034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
130551034
NCBI-ProteinID:
XP_057184559
LinkDB
All DBs
Position
Unknown
AA seq
1422 aa
AA seq
DB search
YSSRCLGCLSQVEELQRQSYLSPGEVKQVEFIKTIETLCSTPATRCSNPLDSSRVLQMTR
SDPESRRLLEEIVQDPARSSSRSLLDCVRLDWIRCWDTDAQSSVLLSRLQDSTLGSCDAV
TLWSYLTFLHDWGRVTAWVCSMTARDTETTAAPRWPALTPHIINSYSHCGEYMRNQILDL
LAPQGLFVQSEMDDFEQLLWRLGQAGGVMRDGSGPPVPQFLSSQGQEFHQRFILHCLENS
LQYLLYTYLEHYRLTPGNCPGLDDRNLFESFPWFEMMLKLQRIPRDLKDPERVFQASLTG
AQVLLPGSQASISSMLLEGHSLLALSTIMFRPGGIDQAMREGERGQDPLSRVDPQLLRMA
LGAYPKLKTALFPQIGPRGASSCDISLYHLMQSLQPLDPSRLFSWQAGNVAGGTETSSEP
PHFSSPHLVSRHSLIENLDYLYYLSHRRPAFAYGVFLTQHLVNCSNVKSRLSQAVEQVFS
LALLNFSSASVTAACVCFCELLGVCSLKLRVDLKALNLILKLWSRNYEDGAEASFRQMLV
EKAGKLVSDEKHTAQELLVHLEEAVRDALETKGVGRSSYEAAQDWALPVKFCQLHALPLS
SAYPQDCACDGQWINFLLFVQLHSYPPQQVRSLAAGFSPALQAHISLAFQDLPAISPHTG
LEEQGTVRDDNPEASGELFQVLLKSQEKASPWRYLLSESVRHHSPALSVLAACHQGAELL
QCLCVWILTSVEDEISEEATAHIDENPSHHVWNLHDLSILWKTLLHRSKIRPLIRGFQLF
QRESPLIYMLNMYELCYDYKDYQRGKDKLLHFQKCLLNLRSSSVVLSCDVLPVQWVESQA
SVLLLVLLKQSRTQYELRRLLQLLVDMERLLKSNGPDFKKLSQLSQVLSDTPVPLSPCLL
EDYSTSALQGECRKMLEQLQDTGLFTQARKVAQLAELPVDCLIINELLRDLSALKAKRQW
DRQETRLGFWRKCHHQLKTDCVDPETACQFFLSQAEEPLQSDSEVIQLQERCLLLGLAGH
WLSCRESPLPVLRLAQLEKRQWEYRIRWLVLRTALERESLFAPSALSEDSFENLLKEFSF
SKMAVVNDQAHLSLEGLPASEDDCALSEQDRKALSALVGQLLNEGSVNEASRVCRYFGSF
HRDMWLVLRCRGLACGELQPGLPELHSPDGESRRSLPSSPSTSSLSSFVVVSSPEDAVLV
QLKQLVDQCCHGKSYCKQVLSLYELSKELQCTYAEISSEEPEAVLRKVLLSQQSDRCKKA
QAFISVQGLRSDAVAQLISSAVVDGLLSSSHEGQTGERLMYGPVDSREEFIQLAKLCGDP
NLVGSKLLEIISTVPLSELSCTVEILILAHDCFSLTCNMEGIVRVLQAARHLSHTHLAHG
EGYGLLVRLLTGIGRYNDMTYIFDLLHQNHRFEMLLRKKVES
NT seq
4267 nt
NT seq
+upstream
nt +downstream
nt
ttacagtagcagatgtttgggttgtttatctcaggttgaagagcttcagaggcagagtta
cctgtcacctggggaggtgaagcaggttgagttcattaaaaccatcgagactttgtgctc
gacgcccgcgacaagatgctcgaaccctttggactccagcagggttctgcagatgacccg
gtcggatccagagagcagaagacttctggaggagatcgtacaagacccagcgcggtcctc
ctccaggtccttactggattgtgtgcgtctggactggatcagatgctgggacacagacgc
acagagttcagttcttctgtccagactgcaggactccactcttggttcatgtgatgccgt
cacgctctggtcgtatctcacctttcttcacgattggggtcgagtcaccgcatgggtctg
cagtatgactgcgagagatacggagaccaccgctgccccccgctggcctgcgctgacacc
acacatcatcaacagctacagccactgcggagaatacatgcgcaatcaaatcctggacct
gctcgctccgcaggggctgtttgtccagtcggagatggatgactttgagcagttgctatg
gcgactgggtcaagctggaggagtgatgcgggatgggagcggtccccccgtcccacaatt
cctctcttcacaggggcaagagtttcaccagcgcttcattctgcactgtctggagaacag
tctgcagtatctgctctacacgtacctggagcactacaggttaactcccgggaattgtcc
tggtctggacgacaggaacttgtttgaaagtttcccctggtttgaaatgatgctgaagtt
acagagaatccccagagacctcaaagatccggagcgggtgttccaggcgagtctgactgg
agctcaggttctgttgcccggcagtcaggcgagcattagcagcatgttactggagggtca
cagtctgctcgccctctctacaatcatgttcagaccgggcggcattgaccaggcgatgcg
agagggagagagaggtcaggaccctttgagtcgtgtggaccctcagctgttgagaatggc
tctgggtgcgtatccgaaactcaaaacggctcttttcccccagatcggtccccgcggggc
gtcctcctgtgatatatccctctatcacctcatgcagtctttgcagccattggatccttc
cagactcttcagttggcaggcggggaacgtcgcgggcggcaccgaaacatcctccgagcc
gcctcatttctccagccctcatctggtcagcagacactccctcattgagaacctggacta
tctgtattacctgagccacaggcgcccggcgttcgcctacggggttttcctcacacaaca
tctggtgaactgcagtaacgtaaagtcacggttatctcaagccgtggagcaggtcttctc
tttagctctgttgaacttcagctccgcctccgtgacggcggcgtgtgtgtgtttctgcga
gctgctaggcgtgtgtagtctcaaactgagggtggatctgaaagcgctcaacctcatcct
caaactctggagccggaactatgaggatggagccgaagcctcgttcagacagatgctcgt
tgaaaaggccggtaagctggtgtccgatgagaaacacacggctcaggagctcttggtcca
cctggaggaggcagtcagagatgctctggagacgaaaggcgtcggtcggtcatcatacga
ggcggcgcaggattgggctcttcctgtgaagttctgtcaactccacgccctgcctctaag
ctccgcctacccgcaggactgcgcgtgtgatggacagtggatcaactttctgttgtttgt
acagttacacagttatcctccccaacaggtgagatctctggctgccggtttcagtccggc
tcttcaggctcacatctctttggcgtttcaagacctcccggccataagccctcacacggg
tttggaggagcaggggacggtcagagatgacaacccagaagcttctggagaactgtttca
ggttctgctgaagagtcaagagaaagccagtccctggagatatctgctgtctgaatccgt
ccgtcatcacagtcctgcgctctccgtactcgccgcctgccatcagggcgcagaactgct
tcagtgtctctgcgtttggatactgacgtccgtagaggacgagatctccgaggaggccac
cgctcacatcgacgagaaccccagtcatcacgtgtggaacctccatgacctctccatctt
atggaagaccctcctccacaggagcaagatcaggcctctgattcgtggattccagctctt
tcagagggagtctccactgatttacatgttgaacatgtatgaactctgttacgactacaa
agattatcagagaggcaaagacaaactcctacatttccagaaatgtctgctgaacttgcg
gagcagcagtgtcgtgttgagctgtgacgttctgccggtccagtgggtggagtctcaagc
gtcggttcttctgttggttctcctgaagcagagcagaactcaatacgagctcagacgtct
tcttcagctgctggtggacatggagcgtcttctcaaatctaacggtccagactttaagaa
gctcagtcagttgagtcaggtgctctcagatacgcccgtcccgctgtctccgtgtctcct
ggaggattattccacctccgctctgcagggggagtgcaggaagatgctggaacagctgca
ggacacgggactcttcacgcaggccaggaaagttgcgcagttggccgagctgcccgtcga
ctgcctgattataaatgagctcttgcgagatctgtccgctctcaaagccaagcgtcagtg
ggacagacaggaaacccgtctggggttctggaggaagtgtcatcatcagctgaagacgga
ttgtgtcgaccctgagacggcctgccagttctttctgtctcaggctgaggagcccttgca
gtcggattcagaggtcattcagcttcaagaacgctgtcttctgctgggcctggcgggtca
ttggctgtcatgccgtgagtctccgctgcccgtcctgcgtctggcacagctggagaaacg
acagtgggaatatcgcatccgatggctggtcctccgcacggctctggaacgagagagttt
gttcgctccctccgcgctctcggaagattccttcgaaaacctcctgaaagagttttcctt
ttccaaaatggccgtcgtaaacgaccaggcgcatctgagtctggagggtcttccggcgag
cgaagacgactgcgcgctgtccgaacaagaccgtaaagctctgagcgctctcgttggcca
gctgctgaacgaagggagcgtgaacgaagcgagtcgagtgtgtcgatacttcggctcgtt
tcacagagacatgtggctggttctgaggtgtcgtgggttggcgtgtggagagctgcagcc
gggactgccggagcttcacagtccggatggagaatctagacgcagtttgccatcatctcc
cagtacgagcagtctgtcgtcatttgtggtggtttcatctcctgaagatgccgtcttggt
tcaactcaagcagctggtggatcagtgctgtcacggcaagagttactgcaaacaggttct
cagcctctacgagctttcaaaggagctgcagtgcacatacgcagagatctcgtctgaaga
acccgaggcggttctgcggaaggttcttctgtctcagcagtcggatcgctgtaagaaagc
tcaagcgttcatcagtgttcagggcctgcgctccgatgccgtggctcagctcatatcttc
agctgtggtggacggtctgctcagctcatctcacgagggtcaaacaggagagcgtctcat
gtacgggccggtggacagcagggaggagttcattcaactcgccaaactgtgtggagatcc
aaacctggtgggaagcaaactgctggagatcatctccaccgttcctctgtcagagctcag
ctgcactgtagagatcttgattttagctcacgattgcttcagtctcacctgtaacatgga
gggtatcgtgagggtcctgcaggctgccagacacctgagtcacacacacctggctcacgg
cgaaggatacggactgctggtgcgtctgctcacaggtatcggcaggtacaatgacatgac
gtatatctttgacctgttgcatcagaaccatcggtttgagatgctgctgaggaagaaagt
ggaatcg
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