Triplophysa rosa: 130551586
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Entry
130551586 CDS
T09216
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130551586 (dennd4c)
Membrane trafficking [BR:
tros04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130551586 (dennd4c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
130551586
NCBI-ProteinID:
XP_057185292
LinkDB
All DBs
Position
LG1:complement(36103692..36156353)
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AA seq
1928 aa
AA seq
DB search
MIEDKSHRVTDYFVVAGLTDKSTPLEQDLSEAKSSGPKAPITDLAVINKSVGETVPEGFT
CIESTHTGQPANLNHGSLKSPELFLCYKRCRGKPPLIDIGVLYEGKERLIQGCEVIQATP
FGRCANVNNSSATSHRIFITFRRAPPVQPQNSLAVTDICVIITNKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSIAYKAGLIFRYPEEDYESFSLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSNGEKVYGAGIQFYEPYPVEGLIEKQKIQLGLLTAVDKKVI
PNLTVNTNKCICLLSRWPFFESFRKFLMFLYKLSANGVNPLPIEKHISHFMHNVAFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYSTLLMNLGPENCATLLHFVLLENKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHGNWKNFPKKPCKSLISSLGNLHQQLATVRRAALEISAVEM
TPIEADFTWHKKKTELEMEIQETFLRFMAIILKGYRSYLKPITQAPSEKATAADSLYDLQ
GFLKSRDRTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGADKG
TKVEGESAEDTRLMELDESQKSEHTVFVMPPEPPPEDGPDPPPKYSYKTFPRLRLELFDR
PRELKPALSTSTAGASVSSSPALLAKRTKQEIKMAYKLAKRFYSNPSQWAKCLFSHCYSL
WFICLPAGMRSAQSKPRAMQQAFNILLKMRSSEVEVLDEVCYRVVMQLCGLWEMPVMAVR
VLMEMKKAGVQPNAITYGYYNKAVLESPWPSRNRSGQFMWTKMRNLVRGVVQFKQALRGT
ALHKGPSLLTPDASAGTTAGADGDRLSHCSADSSNDTEHTLFSRSLIVENITDFHYSKGG
QSDQGYGSKDDLPQDPTDPSVISPALSGDITNGNKAAETQPDGDDMASSVDSVVAVTEPS
SPAEIAPPVASIVKLSTGSLDSNTGRGETAGVCTGKLFMPRIKSEDAALSVETDSANLDS
VTQTTKPQRVKAFAERSCSFSAESKAGMLQKKGSLELSVDNMGADAKILAAAFPGSLTPP
PSATTPTFKEFKMDPTLCPSLQEEEHGNRKESVPESLGSDKLEEKNEGTPEGVGRSLSSG
SASSKVIERADVEAGADPLSLFASETEDAASIHSQESTRAFPTAVSRNLANEIEMYMSLK
NPLGAKSPSMELQPEANRDPSNPDSPAVKSLERRSSLPAGQVQAPSVTETPKRSPAVTRS
KTFAVKSAKTPGSAGQRSASLTALVKSSPSASLGSMMNSISGIKMDNLLSGPKVDLLKSS
MKQAANVASKMWDAVASAYSYSDDEEENSQPRDSFPARLEEQLLSEDVTADSSLPRGLMP
SLASNGLARSNTSLGSSSGSSDAGRVHQPPFLTPGRSMRSGDSERSEHSSSHHASTSSIY
QNCALEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNSTCPFCQISFLPLLHVEFHDL
RVTPGFYLISTSGDSIHSSSTQPITSGSSEVKVSSPSDPSDLMSFPESPEDREGPAEMPV
SQTGTPKILVPEPVHSDPLGLMERQDKRNTSLTRSNSVGGPLQSLDSTQRPNHGISTISL
PNSLLEVADTLGQKWPNPKPVSVPYLSPLVLRKELESLLENEGDQVIYTQKFLSQHPIIF
WNLVWYFRRLDLPSILPGLILTSEHCNNGVQLPQTSLSQDSKQVYVQLLWDNVNLHQEPT
EPLYQLWRTFLQRRGTLAPTDHQEARTLLNSIVRNIQTNDVYGPINLLLREIKKRPDVKR
QRSIYREILFLSLVALGKENIDNEAFDREYRLAYDELSSEQLKALSAIDRPPNNNMKWCL
KCFGAPFI
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggataagagtcaccgtgtgacggactacttcgttgtggccggcctgacggac
aaatccacccctctagagcaggatctgtccgaagccaagtccagtgggcccaaggctccc
atcacagacctagctgtcatcaacaagtcagtgggagaaaccgtgcctgagggcttcacc
tgtatcgagagcacccacaccggccagccggccaatctcaaccatggcagcctcaagagc
cctgaactcttcctgtgttacaagaggtgtcgcgggaagcccccgttaattgacatcggg
gtgctgtacgagggtaaagagcgtctcattcagggttgcgaggtcatccaggccacaccg
ttcggccgctgcgcaaacgttaacaacagctcggccacgtcccaccggatattcatcacg
ttccgccgagcgccgcccgtccagcctcagaactcgctggctgtcacagacatctgcgtc
atcatcacaaacaagggcgaaactccgcctcacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggatcaagtgtgtttctgtgctacaagaagtcagtctccgcctct
aactccatcgcctataaggccggtttgatctttcgctatccagaagaagactatgagtcg
ttttccctctcggagtccgtgcccctcttctgtcttcctatgggggccaaaattgagtgc
tgggcccctaacacacgctaccctttacctgtcttctccacgtttgttctgaccaactcc
aatggagagaaggtttatggagctgggatacagttctatgagccctatcctgtggagggt
ctcattgagaaacagaagatccagctgggtctgctcaccgctgtggacaagaaggtcatc
cccaacctcacagtcaacaccaacaagtgcatctgcctgctgtcccgttggcctttcttt
gagtccttcagaaagttcctcatgttcctgtacaagctgtctgccaatggagtcaacccg
ctgcctattgagaaacacatatctcacttcatgcacaacgtcgccttcccgtcccctcag
agacccagaatactggtgcagctgtcagcgcatgacaccctaatcctgtcccagcctgtc
tgtacacctttgccactaagcggtgcggattacagcactctgctcatgaatctaggccca
gagaactgtgccacactgctgcactttgtgcttctggagaacaagattctgctacactcg
ctcagaccagccgtactgaccggagtggctgaggccgttgtggcgatgatctttccgttc
cagtggcagtgtccgtacatccccctgtgtcctctctctctggcgggggtcctgaacgca
ccgtgtccctttattgtgggtgtggactccagatactttgacctctatgatcccccaccc
gatgtcgtctgtgtggacttggacaccaacactatatacttgtctgatgagaaacgacac
ggtaactggaagaattttccaaagaagccctgcaagagtctcatcagctctctggggaac
ctccaccaacaacttgccactgttcgacgggcggcgctagaaatctcagcggtggagatg
acccccatcgaggcggacttcacctggcataagaaaaaaaccgaactcgagatggagatc
caggagacgttcctgcgcttcatggccatcatactgaagggctaccgaagctacctcaaa
cccatcacacaggcaccttctgagaaagcaaccgctgcagactcgctctatgacctgcaa
ggattcctgaagagtagagaccgcactcaccagaagttctactctcaactcaccaagact
cagatcttcatccgcttcatcgaggaatgcacctttgtcagcgacaaagacaccggtctg
gccttcttcgatgactgcattgaaaagcttttcccttccgacaaaggagcggacaagggc
acaaaggtggaaggtgagtctgctgaggacaccaggttgatggaactggatgagtcacag
aagagcgagcatacggtctttgtaatgccacccgaaccccctccggaggacgggcccgac
cctcctccaaaatacagttataagaccttcccacgtttacggttggagctgtttgaccgc
cctcgagagctgaagccagcgttgagcaccagcaccgcaggagctagtgtgtccagtagc
cccgccctgctggccaagagaaccaaacaggaaatcaaaatggcctacaagttggcaaag
cgtttctactccaatccatcccagtgggcaaagtgtctgttcagtcactgctacagtctg
tggttcatctgtcttcccgctggcatgcgctcggcccaatccaaaccccgcgccatgcaa
caggcctttaacatcctgctcaagatgaggagctctgaggtggaggtactcgatgaggtg
tgttatcgcgtggtgatgcagttgtgcggtctgtgggaaatgcccgtcatggctgtgcgc
gtcttaatggagatgaagaaggctggagttcaacccaacgctattacttatggatactac
aacaaggctgttctggaaagtccttggccgagccgtaaccgcagcggacagttcatgtgg
accaaaatgcgtaatcttgtgcgaggagtggtgcagtttaaacaggcactgcgtgggaca
gccctgcataaaggaccttctctgttaaccccagatgcatcagcaggtacaacagcaggt
gctgatggagacagactcagtcactgcagtgccgacagctcgaatgacactgaacacacg
ctcttctctcgcagccttatcgttgagaatattactgactttcactacagtaaaggaggt
cagtctgatcagggttatggatctaaggacgacctgccccaggaccccacagatccatcc
gtaatctctcctgctctgtctggtgacatcactaacggcaacaaagctgcggagacccaa
ccggatggtgacgatatggccagttctgtggatagtgttgtggctgtgaccgagccctcc
agccctgctgagatagcgccccctgttgccagcattgtgaaactgtccactggaagcttg
gacagcaacacgggcagaggagaaactgcaggagtttgcacaggtaagctcttcatgccg
cgtataaagagtgaagacgctgccctgtctgtggagacggattctgcaaacctggactct
gtgacgcagaccacaaagccgcagagagtaaaagccttcgccgagcgcagctgcagtttc
agcgccgagagtaaagccggcatgctgcaaaagaaaggcagtctggagctaagcgtagat
aatatgggtgctgacgcaaaaatcctcgccgccgcgttccctggaagtctgacccctccg
ccttctgccaccactcctacgtttaaggagtttaagatggaccctacactgtgcccttct
ctccaggaggaagaacacggaaatagaaaggagagcgttcccgaatctctgggttcagac
aaacttgaggagaaaaacgaggggacgcctgagggagttgggcggagcttaagtagtggc
tccgcctcctctaaagtcatagagagggcggatgtcgaggcgggggcggaccctctctct
ctcttcgcctcggaaaccgaggacgcggcatctattcacagccaggagtccacgcgggcc
tttccgactgcggtgtcgaggaatctcgccaacgagatcgagatgtacatgagtctcaaa
aacccgctgggagccaaatcccccagcatggagttgcaaccagaggccaaccgtgatccc
agcaatccggattctccagcggttaaatctttggaaaggcgatcgagccttccggctggt
caagtccaagcacccagcgtcacggagactccgaaacgtagccccgccgtcacacgctcg
aagaccttcgctgtcaagtcagccaagaccccgggctctgcaggtcaaaggtcggcatca
ctgacagctcttgtgaagtcttcgcctagcgcctcgttgggttctatgatgaacagtata
tcgggcatcaagatggacaacttgctgtcgggtcctaaagtggacctgctgaagtcgagc
atgaagcaggcggccaatgtggccagtaagatgtgggacgccgtggcctctgcgtactcg
tactccgatgatgaggaggaaaactcccagcccagagacagtttcccagctcgactagaa
gagcagctgttgtctgaagacgtgacggcggacagttctttacccagaggtctgatgccc
agtctggcgtcaaacggactcgcacgtagtaacacaagcctgggcagcagcagcgggagc
agtgacgccggccgtgtacaccagccaccatttttgactcccggtcgatcaatgagaagc
ggagactcggagaggtctgaacatagttcgtctcatcacgccagcacctccagcatttac
cagaactgtgctttagaggttctgatgtccagctgctctcagtgtcgctcctgtgaagct
ctggtgtatgacgaggagatcatggcaggctggacggcagacgactccaatctgaactcc
acctgtccgttctgtcaaatctcttttctccctctgctccacgtggagtttcacgacctg
cgtgtcacaccgggcttctacttgatcagcacatcaggagacagtatacacagctccagc
acacagccgatcacttctggctcctccgaggtcaaagtcagcagtcctagtgacccttct
gatctcatgagtttcccagaatcccctgaggacagagagggtcctgcggagatgcccgtc
tctcaaactggaactccaaagatcctcgtaccggagccggtacattcagacccactgggt
ctaatggaaagacaagacaagcgtaacacctctttaacccggagtaacagtgtgggcggc
ccgctgcagagtctggactcaactcaacggcccaatcacggcatatcaactatcagcctg
cccaacagtctgctggaggtggcggacacactgggtcagaagtggcccaacccaaaacca
gtttcggtgccgtatctcagtccgctggtcctgcgtaaagagctggagtcactgttagag
aacgagggtgaccaggtaatctatacccagaagtttctcagtcagcatcccatcatcttc
tggaatctggtgtggtatttccgtcgtttggatctacccagcattctgccaggactcatc
ctgacctctgagcactgcaacaatggagttcagctgccgcagacgtctctgtctcaggac
agtaagcaggtgtatgttcagctgctgtgggacaatgtgaacttgcatcaggagcccacc
gagcctctctatcagctctggaggaccttcttgcaacgaaggggaactttagcccctact
gaccaccaggaggcacgaactctactgaatagcattgttcgtaacatccagacgaatgac
gtttacggccccatcaacctactcctccgggagatcaagaaacggccagatgttaaacga
cagaggagtatctacagggagattttgtttctgtcgcttgttgccttgggaaaggagaac
attgacaatgaggcctttgaccgcgagtaccgtcttgcatacgatgagctgagctcagag
caactcaaagctctgtccgccatcgacagaccacccaacaacaacatgaagtggtgtctg
aaatgcttcggagctccatttatctga
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