KEGG   Triplophysa rosa: 130551638
Entry
130551638         CDS       T09216                                 
Symbol
skic8
Name
(RefSeq) SKI8 subunit of superkiller complex protein isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
tros  Triplophysa rosa
Pathway
tros03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130551638 (skic8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tros03019]
    130551638 (skic8)
Messenger RNA biogenesis [BR:tros03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     130551638 (skic8)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N eIF2A Tricorn_2nd Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_SPT8 NBCH_WD40 Beta-prop_HPS5 Cytochrom_D1 Beta-prop_IFT140_1st Ge1_WD40 PROPPIN Beta-prop_NUP159_NUP214 WD40_like Beta-prop_LRRK2 Beta-prop_RIG_1st WDR54 VPS8_N DUF2415 Beta-prop_pof12
Other DBs
NCBI-GeneID: 130551638
NCBI-ProteinID: XP_057185383
LinkDB
Position
LG3:complement(3299663..3302361)
AA seq 313 aa
MLSFETNTMSTQYSILFKQEHAHEDSIWTAAWGRSEKDGSETIITGSLDDLVKVWKWSDE
KLELQWTLEGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLETGKQIKSLDAGPVDSWTV
AFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGII
NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHASLAGTLSGHG
SWVLSVAFSPDDKHFVSSSSDKSVKVWDTSSRTCINTFFDHQDQVWNVKYNLTGSKIVSA
GDDRAIHIYDCPM
NT seq 942 nt   +upstreamnt  +downstreamnt
atgctaagttttgaaacaaacacaatgagcacacaatacagtatactgttcaagcaggag
catgctcacgaggattcgatctggacagcagcatggggccgcagtgagaaggacggatct
gaaaccatcatcaccgggtctctggatgacttggtgaaagtgtggaaatggtcggatgaa
aagctggagctgcagtggaccctggagggtcaccagctgggtgtcgtctcagtggacatc
agtcacaacggggcgatcgctgcctctagctctctagacgctcatattcggctgtgggat
ctggagacgggcaaacagatcaagtccttggatgcaggcccagttgattcatggactgtg
gcattctccccggactctaaatacatcgccaccggcagccatcttgggaaggtcaatatc
tttggtgtggagagcggaaaaaaggaacactcactggacaccagagggaaattcattctg
agcatcgcttatagtccagatggaaagtacttggccagtggtgctattgacggaattatt
aacatctttgatattgcaactgggaaactcctgcacacgctggaaggacatgctatgccc
atcagatctctgaccttctctcctgactctcagctgctggttacggcatctgatgatggt
tacatcaagatatacgacgtgcagcatgctagtctggccgggactctcagcggtcacggg
tcctgggtgctgagtgtggccttctcacctgatgataaacactttgtgtccagttcgtca
gataagagcgtaaaggtttgggacaccagcagcagaacttgcataaacacattctttgat
catcaggatcaggtttggaatgttaaatataacctgacgggctcaaagattgtttcagcg
ggcgacgacagagccatccatatatatgactgtcccatgtga

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