Triplophysa rosa: 130551744
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Entry
130551744 CDS
T09216
Symbol
si:dkey-219c3.2
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tros
Triplophysa rosa
Pathway
tros03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130551744 (si:dkey-219c3.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130551744 (si:dkey-219c3.2)
03036 Chromosome and associated proteins [BR:
tros03036
]
130551744 (si:dkey-219c3.2)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130551744 (si:dkey-219c3.2)
Coactivators
SAGA/TFTC/STAGA complex
130551744 (si:dkey-219c3.2)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130551744 (si:dkey-219c3.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
130551744
NCBI-ProteinID:
XP_057185597
LinkDB
All DBs
Position
LG3:8418939..8463391
Genome browser
AA seq
980 aa
AA seq
DB search
MMSLHYPQCLCSKTTHAQCAHLKRLSKMAGVPDPLEDMLYSEVDEKAVSDLVGSLESQLG
GQNKSVGDIRRPGSSSSAINPHLGKLLPAQVGTTLEQQQRQSERNQEGKSLENGPDRIQA
SNSAPSASNLSNNSASLVTATNRAQYHSAGTAASNPSTLSASCSSDAAATDSHPNTNHIR
TAPARIQSVNGSSGTLNSSVIASAPASVAGLQVEARPGSVNGIDIGSGVGKSNMSAPNNT
NTAFVSAQPSSTLPQPLDSQANPTIALHRPPNTITGVVHNGGDPKVSGLGLGSTPVALTN
TEPKSDPQSQIKAIVPNQLPVAPVGLHPSTPTQIIVSSAMQASPVVTSLPVASTPSALAK
PATTTLVGQPTTLLRPGMPTQGTVTATPPQRLGAPTTQLVVRPQQQNIQLPPGFTIPPGM
VLVRTEVGQLVLVPQQVLAQVKAQNLNKGTLSPRPATPTAAAPFRVTTPVAQQKTAVVTI
TSAQKPTTTVITAGARVQPAPQTVLKPSLTPQSPTTTSAATPVNRGPVLSQEMQENVKKC
KNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEEFTNRLQTELKSSPQPYLIPF
LKKSLPALRLTLLNSQQSITQLSQTSTTSTVNTIKAPAPSALTSTVSSIRPATVMAPSAT
VAVKRPGVQATPTRMPIVFTQTVRAQGAAGTHLQMRTPMGVAFQASANQKQKLNDPGGGT
FRDDDDINDVASMAGVNLNEENARILATGSELVGTQIRSCKDEAFLPASLLHKRLLETAK
KFGVTEVSMETVTLISHATQSRLRSMLEKVSAVAQHRADSCKDEELYEQASDVRTQLKFF
EQLERMEKQRKDDEEREILMKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLT
ALAAIGPRKKRKLDSPGASVGAELPASSSGSAAGSTSSSSSSVRQTRQRITRVNLRDLIF
CLEQERTTARSMLLYKALLK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattacactacccacaatgcctctgctccaaaacaacgcacgcgcagtgcgca
catctcaagcgtctctcaaagatggcgggcgtccccgatccactggaagatatgctctac
tccgaagtggacgagaaagccgtcagtgacctcgttggctcgttagaatcgcagctcggc
ggacaaaacaagtcggtgggcgatataaggagaccgggttcatcctcaagcgcgataaat
ccacacttgggaaaattgctgcccgcccaagtaggaacaacactggagcagcagcagcgc
cagtcagagcgaaatcaggagggaaagtctctggaaaacggtccggacaggatacaggcg
tctaattctgccccttccgcctcgaacttgtcaaataactccgcatctttggtcaccgct
acgaatcgggcgcagtatcattcagcgggaacggcggcatcaaatccatcaactttgtcc
gcgagctgttcaagtgacgcagcagcaacggactctcatcccaacacgaatcacatccgg
accgctcccgccagaatacagagtgtgaacggaagcagtggcacgttgaactcttctgta
atagcgtctgcacccgcctctgtggcgggattgcaagttgaagccagaccaggcagtgta
aatggtattgacattggttcaggtgtaggtaaaagcaacatgtctgctcctaataacaca
aataccgctttcgtgtctgctcagcccagtagcacactgccacaaccattagacagtcaa
gcaaatcccaccattgcactgcacaggcctcctaataccatcacaggtgttgtacacaat
ggaggtgaccccaaagtctcgggattgggtctcgggtccactcctgtggcattaacaaac
acagagcccaaatctgaccctcaaagccagatcaaagctatcgtcccgaaccagctcccc
gttgctcctgtaggtttgcaccccagcacgcccactcagattattgtgtctagtgctatg
caggctagtccggtggtgacctcacttcctgtggcaagcactccctctgcactcgcaaag
ccagcgacgacgaccctcgtaggccagcctacgaccctgttgagaccgggcatgccgact
caagggacggtgaccgcgacacccccgcagcgtctgggggcacctacgactcagctggtg
gtcaggccgcagcagcaaaatatccagttacctccaggattcactataccgccaggcatg
gtactggtacgcacagaggtgggtcagctggtgttggttccccagcaagtcctggcccag
gtcaaagctcagaatctaaataagggcacgctgtctccaagacccgcaacgcctactgcc
gcagcacccttcagagtcaccacacctgttgcccagcagaaaacagcagtggtaacaatt
acctcagctcagaagcctaccaccacagtcattacagcaggagcccgtgttcagcccgca
ccgcagacggtcctcaaaccctcactgaccccacagagtcccaccacgacttccgctgcc
acccctgtcaacagaggtccagtcctctctcaggaaatgcaagagaatgtgaagaagtgc
aagaacttcctagcaacgctcatcaaacttgcatcccataattccccctcaccagaaaca
tcgaagaatgtgaaggcactagtgcaagatctgttggacgcaaaaatcgaaccagaggag
tttacgaatcgcctgcagacagagttaaagtcatctccccaaccctaccttatccctttt
ctgaagaaaagcctgcctgctctgcgtctcactctcctgaactcgcaacagtctataacc
cagctctcccaaacctccaccacctccacggtcaacaccattaaggctccagcgccgagt
gcgctgacctccaccgtatctagcataaggccagccaccgtaatggctccatctgccact
gtggctgttaagagacccggagtgcaggcaactccaacgagaatgccgattgtgttcact
cagactgtccgtgctcaaggtgctgctgggacacacttgcaaatgaggactcccatgggt
gtggcttttcaagcctcggccaatcagaagcagaagctgaatgaccctgggggtgggact
ttcagggatgatgacgacatcaatgatgtggcgtccatggccggcgtgaacctgaacgag
gagaacgcccgcatcttggccacgggctctgaactggtgggcacccagatccgttcctgc
aaagacgaggccttccttcccgccagcctgctccacaagcgtctcctggagactgccaag
aagttcggcgtgacggaggtgtcaatggagacggtcactctgatttctcacgccactcag
tctaggctgcgctccatgctggagaaggtctcggccgttgcgcaacaccgcgctgactcc
tgcaaagatgaggagctgtacgagcaggcgtcggatgtgaggacccagctgaagttcttt
gagcagctggagaggatggaaaagcagaggaaagatgatgaagagagggagattctgatg
aaagcagctaaaagtcgctcaagacaagaagatcccgagcaagcccggctcaaacagaaa
gctaaagagatgcagcagcaagaactcgcccagatgagacaacgggacgccaacctcaca
gccctcgccgccattggaccccgcaagaaacgcaagcttgattccccaggggcctcagtg
ggtgcagagcttcctgcgagttcctctggatcggcggccggctctacctcatcttcctcc
tcctcagtccggcagacccgtcagcgcatcacccgggttaacctcagggacttgatcttc
tgcttggagcaggagcgaaccacagccagatccatgctgctctacaaggccctcctgaag
tag
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