Triplophysa rosa: 130551766
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Entry
130551766 CDS
T09216
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
tros03015
mRNA surveillance pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130551766 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
130551766 (acin1b)
03015 mRNA surveillance pathway
130551766 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130551766 (acin1b)
03041 Spliceosome [BR:
tros03041
]
130551766 (acin1b)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130551766 (acin1b)
Spliceosome [BR:
tros03041
]
Complex C
Other components
EJC/TREX
130551766 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
130551766
NCBI-ProteinID:
XP_057185685
LinkDB
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Position
LG1:12284518..12308054
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AA seq
1272 aa
AA seq
DB search
MAELDDVTLDGKQLQSLRVADLKTALEQRGLAKSGQKNALIKRLKGALMLENLQRTSTHH
AGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADEIQRPAGPEEDDHML
TSESTSCLSDKHRIVHSHLSVSQAEGGGGDRGGGLPQDPGLTGSHRLDISPSHLPHEPPD
TKAGRIRHPSNFPSHEEVATPSPPRAVASLSVRVVGQPERQGLPLMMPRSQEREGTAPVE
TGPAQSVLQLSRSARAAAFVQADGDDEEEDNDSDDDDYEWGPSSNAKKSVRAPPVQPPPA
TGPQRSRRKLQPPQHIPPQPQPVPQPPLQLRQPTPPPSPPPELSFLLPDTPKQSPHDQDE
AVGPGDGAAPGPGSMPSPPPFKRQDSSSSSRSSSPEPLSTRRPGPLSLLVRKMESEGVFG
GGQKVGIEGEMEVEEQEGGKPAEAPEVLMGTNVQTEPQISAQQLNRPHVSVSVPTMSSVQ
QDAHRKLENKISESQDEKNEQKRGEEKENEKVNETAAPFHMKSSKMFPLKRPRIFSAVPP
PESLKSPSKPEQVSVLTTAPTCSEDVMMETETHTVTSQSKHSEENKEVKILEKQSPRAKE
ESIMVPSSHSSSDEGELGKTTDAHKPSSSTSSHSSSDSDSESSSSCSSSSSREKSRPHSQ
KKDKKTEKQKADIKEKTQSPREIKQETLSEPAGQVTMELEGRSDSESAMQQPDHQEADAS
DPRPEKSSPAKLIAARKISLSGKTENASESVGGANRKRRWGSSTAVTAKRPSISITTESL
KTLIPDIKPVLEAVVELHPDEGQLSSEDSAGLHDVDKLEDDQGLKIRRTVTQIVPSDGRE
NGEKKIEEKEEEEEEEEKWTGGEKEKTRKQERSSDAAMETEVGDAIKVTPNDSLVRRSIS
QQKSGVSITIDDPIRPSRELSPPHGQTSNIIHVCNLVRPFTLGQLKELFNRSGTLVEEGF
WIDKIKSHCYVTYSTTEEAVATREALHGVKWPTSNPKVLRVDFCEQDELDFHKGLLSSNR
AGDGNDPQASGTPNRPAAPKPHMPTHREKKERERDRDGVSAMRDQLAERERAMERRERTR
SEREWDRGKVKDFGSEDKAGTTRSRSQDRRRREREKSKEKRTEKKDKPEEPPAKLLDDLF
RKTKVAPCIYWLPLTEEQVTQRALERAERKKEREKRRKELQDEEDKKREERRERAKVRER
DGGATGGGGAGGGVGRSAEGERDRGKERERERGREGEKRRDAYRGNRDGDSKTAGGSRRS
LSRSNTSRDRRR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgacgatgttacgttagacgggaaacagcttcaatcgcttcgtgttgcg
gatttaaaaaccgctctggagcaaagaggtctcgccaaaagtggacagaaaaatgcactt
attaaacgactgaaaggggctctgatgttggagaatctccagcgaacatccacccatcat
gctggacttcaacccaactctcagattggagaggagatgagtcagaacagctttataaag
cagtacctggccaaacagcaggagctccttcgacagagactggagagagaagcacgagaa
gctacggaggcagatgagatacagcgtcctgctggtccagaggaggatgaccacatgttg
accagcgaaagcacttcatgtctgtcagacaagcatcgcattgtacactctcatctatct
gtaagccaggcagagggtggaggtggggatcgtggaggagggttgcctcaggaccctggt
ttaacgggatcacacaggctagatataagcccttctcatctgcctcacgaaccccctgac
actaaagccgggaggatcagacatccttctaatttccccagccatgaggaagttgccaca
ccttctcctccacgggcagttgcctccttgtctgtacgagtggttggacaacccgagcgt
caaggcctgccacttatgatgcctcgttcccaagagagggaaggaacagccccagttgaa
acaggtcctgcccagtcagtgttgcagcttagccgttctgcgagagctgcagcttttgtt
caagctgatggtgatgatgaggaagaggataatgacagtgacgacgacgattatgaatgg
ggtccttcctcaaatgcaaaaaagagtgtgcgggctcctcctgtacaacctccaccagcc
acaggcccccagcgatcccgtcgaaagcttcaacccccacaacacatccctccccaacct
cagccagtccctcagcctcctctgcagctccgccaacccactcctcctccatccccaccc
ccagagctctcctttctacttcctgacactcccaaacagagcccccatgaccaagatgaa
gcagtgggcccgggagatggtgctgctccggggcccggctccatgccatctcctcccccc
ttcaagaggcaggattccagctccagttctagatccagcagcccagaacctctgtccaca
cgaagacctggtcctctgagtctgctggtacgcaaaatggagtctgagggtgtgtttggt
ggtggacagaaggtagggatagaaggggaaatggaagttgaagagcaggagggtggcaaa
ccagcagaagcacctgaagtacttatgggaacaaatgttcagaccgaacctcaaatctca
gctcagcagcttaacaggccacatgtgtctgtatcagtacccacaatgtcctctgttcag
caagatgctcatcgtaaattggagaataagatctcagaatctcaggatgagaaaaatgag
caaaaaagaggtgaagagaaagaaaatgagaaagtgaacgagaccgctgcaccattccat
atgaaatcatccaaaatgtttccacttaaaagaccacgaattttctctgctgtcccgcca
cctgagtcacttaagtcaccctcaaaacctgagcaggtgtcagttctcaccacagcgcct
acctgctctgaagatgttatgatggagacagagactcatacagttacgtctcaatcaaaa
cacagtgaggagaacaaagaagttaagatactagagaaacagtcacctagagcaaaagag
gagagtataatggtcccatcttcacactcttcatctgatgaaggtgaactaggaaaaaca
acagacgctcacaaaccaagctcctcaacatcaagtcactcatcttctgactctgattca
gaatcatcatcctcctgttcttcaagctcttcacgtgagaaatccaggccacacagtcaa
aaaaaggataagaagacagagaaacaaaaagcagatattaaagaaaagacccaatctccc
agggagatcaaacaggaaactctctctgagcctgcaggccaagttaccatggaactggag
ggccgctcggactcagagagtgctatgcagcagcctgaccaccaggaggcagatgcaagc
gaccctcgtccagagaagagctctcctgcgaaattgattgctgcccgcaagatctcactg
agcggtaaaacagagaatgcttctgagtctgtgggcggagccaacaggaagagaaggtgg
ggttcaagtacagcagtcactgccaagaggccatcaattagcatcaccactgagtcactg
aagacattaattccagatatcaagcctgtcctggaggctgtggttgaactgcacccagac
gagggccagctctctagtgaagactcagcaggtcttcatgatgtagacaaactggaagat
gatcagggcctgaagattagacgcacagtgacacagattgttccatctgatggacgtgag
aatggggagaaaaaaatagaggagaaggaggaggaagaagaggaagaagagaaatggaca
ggcggagagaaggaaaaaacaaggaaacaggagcgctcctccgatgctgctatggaaaca
gaagtgggagatgccataaaagtcactcccaatgattccttggtgcggcggtccattagt
cagcagaaatcaggtgtgtccataacaatcgacgaccccatacgaccaagtcgcgagctg
tctcctcctcatgggcaaacttccaacatcatacacgtgtgcaacctggtgcgacctttc
actctgggtcagctgaaggagctgtttaaccgttcaggtaccttggtggaggagggtttc
tggatcgacaagataaaatcccactgctatgtcacatactcgactacagaggaagcggtg
gccacccgagaagcgctgcatggtgtaaaatggcctaccagtaatcccaaagtactacgc
gtggatttctgtgagcaggatgagttggacttccataaaggtctcttgtccagtaaccgt
gcaggtgatggaaatgaccctcaagcttcaggaaccccgaaccggcctgctgcccctaaa
ccacatatgcccacacaccgcgagaaaaaggaacgagaaagagaccgagatggtgtttca
gccatgagggaccagttggcagagagagaaagagcgatggaaaggagagagaggactcgt
tctgagcgggagtgggatcggggtaaggtaaaggatttcgggagtgaggacaaagctgga
acaacaaggtctcgatcacaggaccgcagacgcagagagagagagaagagcaaagagaaa
agaactgagaaaaaagataaaccagaggagcctcctgcaaaactccttgatgatttgttc
cgtaaaactaaagtagctccctgtatatactggctacccctcacagaagagcaggtgaca
cagagagctctggagcgtgccgagcgcaaaaaggaacgagagaagaggaggaaagaactc
caggatgaggaggacaaaaaacgagaagaacggagagaaagagcaaaagtccgtgaaaga
gatggaggggccacggggggagggggagcaggtggtggtgtgggtcgttcagctgaggga
gaaagagacagaggtaaagaaagagagagagaaaggggtagagagggagaaaagaggaga
gatgcctacagggggaacagagacggtgactccaaaactgcagggggcagcagacgctct
ctgagccgtagcaatacatctagagatagacgccgctga
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