Triplophysa rosa: 130551893
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Entry
130551893 CDS
T09216
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
130551893 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130551893 (rag1)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130551893 (rag1)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130551893 (rag1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_pre-RNase_H
RAG1_C
RAG1
RAG1_ZnC2
RAG1_DNA-bd
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_10
zf-C3HC4_4
zf-RING_UBOX
zf-RING_6
Zn_ribbon_6
U-box
Motif
Other DBs
NCBI-GeneID:
130551893
NCBI-ProteinID:
XP_057185884
LinkDB
All DBs
Position
LG3:4222397..4231191
Genome browser
AA seq
1059 aa
AA seq
DB search
MENGRWSCEDAPRASMPDELSHPKFSEWKFKLFRVKSMEKAPLPNETPVEKENVAEVEME
MVGSPGSVMKLCFGGKSKENVEGARDRVDLKLQEIDTHMNLLKTLCRLCGLSIRKAKGPA
HEVQGDLEESSRCSLRRMGCKLATWPEVISKVFKVDVTTDMETVHPYKFCHRCWTTAMRG
GGFCTFTRTRISEWKPHTSHCNICFPKKTSFKRMGRKRAKPVKSSHLSKRFKHDSPTSSN
RVWRQTPESLETSGGTEWIKPSVQRGQWVKDITQCQQDHLNTKLVSQDIPTDLLRAFTCQ
VCDHLLSDPVQSPCRHLFCRVCIARYSHALGPNCPTCHQHLNPSHLTRPAKFFLTSLSSL
PLVCPSEGCTEWVRFDCFREHSLNHRAKESQEEQTSSEQNLDGYLPVNKGGRPRQHLLSL
TRRAQKHRLRDLKTQVKVFADKEEGGDVKSVCLTLFLLALRAGNEHKQADELEAMMQGRG
FGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHSLRSAEKELLPGFQQYEW
QPALKNVSSSWDVGIIDGLSGWTSSVDDVPADTISRRFRYDVALVSAVKDLEEDIMEGLR
ERGLDDSACTSGFTVVVKESCDGMGDVSEKHGSGPVVPEKAVRFSFTIMSINIRLDDEVD
AVTIFQEQKPNSELSCRPLCLMFVDESDHETLTAILGPVVAERKAMLESRLILSIGGMQR
SFRFFFRGTGYDEKMVRELEGLEASGSTYVCTLCDSTRAEASKNMVLHSITRSHSENLER
YEIWRKNPFSESADELRDRVKGVSAKPFMETQPTMDALHCDIGNATEFYKIFQDEIGEVF
LKSNPSREERRRWRSALDKQLRKKLKLKPVMRMNGNFARRLMTREAVEAVCELVPSEERR
EALLKLMDLYFQMKPVWRSTFPARDCPDQLCRYSYNSQQFADLLSTTFKYRYDGKITNYL
HKTLAHVPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKAFELEDVLKHHWLYTS
KYLQKFMEAHKNSTKALQATFNPEETPDDVEMAVEIPDF
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgggaggtggagttgcgaggacgctcccagagcttccatgccagatgagctg
tctcatccgaagttctccgaatggaagtttaagctctttcgggtcaaatccatggagaag
gcgccgctgccgaatgaaacgccggtggagaaggagaatgtggctgaggtggagatggag
atggtgggctccccgggtagcgtgatgaaactctgttttggagggaagagcaaggagaac
gtggaaggagctcgggatagagtggaccttaaactgcaggagattgacacccacatgaat
cttctgaaaactctatgtcgcctgtgcggactgtccatacggaaagctaaaggtccagcg
cacgaggtccagggagacttggaagaatccagcagatgttccctgcgcaggatgggctgc
aagctggcgacctggccggaggtcatctcgaaagtcttcaaggtggacgtaacaaccgac
atggagacggtccatccttacaaattctgtcaccgctgttggactactgccatgagaggc
ggaggtttctgtaccttcaccaggaccaggatctcggagtggaagccccacacctcccat
tgcaacatctgcttccccaagaagacctcatttaagcggatgggaaggaagcgggccaag
ccggtaaaaagttcacacctttcaaagagattcaagcatgactctccaacatcatctaat
agagtgtggagacagaccccagagagtctagagacatcaggtgggacggaatggatcaaa
ccatcagttcaaagaggacagtgggtaaaggacatcacacaatgccagcaggaccatctg
aacaccaagctggtctctcaagacatcccaacggacctgttgcgtgcctttacgtgtcaa
gtatgtgatcacctgctttccgatcccgtccagtcgccatgtcgacacctgttctgccgt
gtctgcattgcaaggtacagtcacgccttgggtcccaactgtcccacctgccaccaacac
ctgaacccatctcacttgactagaccggcaaagttcttcctcacgagcctcagctctctg
ccgcttgtctgccccagcgagggctgcactgaatgggtccgattcgactgctttagagaa
cacagcctcaaccaccgtgccaaagagtcccaagaagagcaaacgtcttcagagcagaac
ttagatggttacctgccggtcaacaaagggggacgtcctcggcagcacctgctgtcgctg
acccgtcgagcccagaagcaccgtctgagggacttgaagacccaggtgaaggtgtttgct
gataaggaagaagggggagatgtgaagtcggtctgtttgacgctcttccttctggcgctg
agagccggcaatgaacacaaacaggcagatgagctggaagctatgatgcaaggtagagga
ttcgggctacatcccgcagtgtgtttggccataagggtcaataccttcctgagctgcagt
caatatcacaagatgtaccgcactgtcaaggccactagcggccgccagatcttccagcct
ctgcactccctccgcagtgccgagaaagagcttcttccaggcttccaacagtatgaatgg
caaccagctctgaagaacgtgtccagctcttgggatgtgggcatcatcgatggcctctcc
ggttggacatcctccgtggatgacgtccctgcggacaccatttctagaaggttccgctac
gatgtggcactagtttctgcagtgaaagacttggaagaggacatcatggaggggttaaga
gaaagagggctggacgacagcgcgtgcacctctggtttcaccgtggtagtgaaagaatcg
tgcgacggtatgggagatgttagtgagaagcatggatcaggcccggtggtgcctgagaag
gcagtgaggttttccttcacaatcatgtctattaacatccgacttgatgatgaggtggac
gcagtcacgatttttcaggaacagaagccaaactctgagctgtcctgcaggcctttgtgc
cttatgtttgtggacgagtcagatcacgagaccctgacagccatcttgggaccggtggtg
gcagagcggaaagccatgctggaaagtcggctaatcctgtctatcggcggtatgcaacgt
tcctttaggttcttctttcgaggcacgggctatgatgagaagatggtacgtgaattggaa
ggtcttgaagcctcagggtccacttatgtatgtacgctgtgtgactcgactcgagccgag
gcctcgaagaacatggtgctgcattccatcacacgcagccacagcgaaaaccttgagcgt
tacgaaatctggaggaaaaatcctttctcggaatctgctgatgaactccgtgaccgtgtc
aaaggtgtttctgccaagccgttcatggagacccagcccaccatggacgccttgcactgc
gacataggcaatgctacggagttctacaagatctttcaggatgagattggcgaggtcttt
ctgaagagcaatccaagtcgagaggagcgccggcggtggcgttcagccctggacaaacag
ctgaggaagaaactgaagctcaagcccgtgatgagaatgaacggaaacttcgcccgacgg
ctgatgacgcgggaagctgtggaggcggtctgtgagctcgttccttctgaggaacgccgt
gaggctctgctgaagctgatggatctctacttccagatgaagcctgtgtggaggtccacc
ttcccggcacgagactgtccggaccaactatgtcgatacagctacaactcgcagcagttt
gccgatctcctttcaaccacgtttaagtatcgctatgatggaaaaatcaccaactaccta
cacaagacattggcacacgtgcctgagattatcgagagggatggttctatcggagcgtgg
gccagcgaaggcaacgagtccggtaacaaactgtttcgccgtttccgaaaaatgaacgca
aggcagtccaaagcattcgaacttgaagatgtcttgaaacaccattggctgtacacctcc
aagtatctacagaagtttatggaggcgcacaagaattcaacaaaagctttgcaggctacg
ttcaacccagaagagactccagatgatgttgagatggctgttgaaattccagatttttaa
DBGET
integrated database retrieval system
