Triplophysa rosa: 130551977
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Entry
130551977 CDS
T09216
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130551977 (rfwd3)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130551977 (rfwd3)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130551977 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_THOC3
WD40
zf-C3HC4_2
Beta-prop_WDR5
WD40_CDC20-Fz
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
Beta-prop_EML_2
WDR55
zf-C3HC4_3
Beta-prop_WDR3_1st
EIF3I
WD40_Prp19
WD40_WDHD1_1st
zf-RING_Vps41
Beta-prop_RIG_2nd
CFAP43_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
zf-UDP
Rtf2
zf-RING_11
WD40_2
Beta-prop_EIPR1
Beta-prop_ACSF4
zf-C3HC4_4
Myo5a
Beta-prop_SPT8
zf-Nse
RING_XB3-XBAT31
NBCH_WD40
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
130551977
NCBI-ProteinID:
XP_057186031
LinkDB
All DBs
Position
LG3:complement(15204937..15212013)
Genome browser
AA seq
665 aa
AA seq
DB search
MEDMEVDLQTMVPVHSREGDVIVVSESDSSAEEEDSSVQTTGTADRLGLSYVGNGQRALG
SNAEVFTRNGLGTTEVLQSLIRTVAEMRNTFDQNLRNTSQPEPQTEPVQSSSHTATPLTT
TTSDVSVPAQVSEVTESVAQPQAQPEQPKQDTEPVSESVQQPAPAVNPAVQGGGDEEEGE
TCSICFEPWTTAGNHRLAALRCGHLFGHECIKRWLVEGNKCPQCNKKAKRDHIIFLYARR
LKALDNTEAVRLKKSLEDEQRLRRLGEVEAAQCRLQLQTVRDENTRLRKEIEELRRLRAQ
VAFSSSQGAALSLSQRQESSSGGHYVFSKAVLVSQAGGCRVLSHCERLGCLLASQPSPQA
AFIPGYGVKKISTVNLKPSQYIPIHSKQIRGLAFSQQHDSLLLSAALDNTIKLTSLMANT
VVQTYNTGKPVWSCCWCHDNNNYIYAGLSNGSVLVYDTRDTSTFVQELAPLRSSCPVVSL
SYIPRAASSSFPSGGLITGTLEGGCFWEHKEGTVYMPHILPLESGNCTDIQVEPDSRHCL
ITYRPGRSNPALRCVLMELNRSPESDNGQPPVCSCSPVQTFTAGSSCKLLTKNAVFKSPA
GEGSTFVCAGDESTNSTMVWNAGTGALLQKFPADLPVLDICPFEVNQSSYLASLTEKMLK
IYKWE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatggaggtggacctacagacgatggtaccggtgcattccagggagggggat
gtgattgtagtgtctgaatctgacagcagcgcagaggaagaagattcttccgtacagacc
acaggcaccgcggatcgactcgggctttcatacgttgggaatggccaaagagcacttggt
tcaaatgcagaggtctttactcgtaatggcctcggtaccactgaagttcttcagtcgctc
atccgtacagtggcggagatgcgaaataccttcgatcagaacctaagaaatacatcacag
ccagagccgcagacagaacctgtacaaagttccagccacacagccacgccattgaccaca
acaacatcagacgtcagcgttcctgcacaagtgtctgaagtaacagagtctgtagctcaa
ccacaagcacagccagaacaaccaaaacaagacactgagccggtctctgagtccgtacag
cagcctgcacccgctgtgaatcctgccgtgcagggcggtggagatgaggaggagggtgag
acctgctccatctgttttgaaccctggaccacggcaggcaaccaccgtttggccgctctt
cgctgcggtcacctctttggccacgagtgtatcaagcgctggctggtggaaggaaataaa
tgtccacagtgtaataaaaaggccaaacgtgaccacatcatctttctttatgcgcggaga
ctcaaagcccttgacaacacggaagcagtgcgactgaaaaaatctttagaggatgaacag
aggttacgcagattgggagaagtggaggccgctcagtgtcgtctgcaattgcagacggtg
agagatgaaaacacaagactacggaaagaaatcgaggagttgagaaggttgagagctcag
gtggccttcagttcctcacagggagcggctctgtctttatcccagcgtcaggaatcgtcc
agcggtggacattatgtcttctctaaggcagtgcttgtgtctcaagcagggggctgtcgg
gtgttgtcccactgcgagcgtcttgggtgtcttctggcgtcccagccgtcaccacaagca
gcattcataccaggctatggggtgaagaagatcagcacggtcaatctcaaacccagtcag
tacatccccattcactccaaacagatccgaggtctcgccttcagccaacagcacgacagc
ttactgctgtccgccgccctggacaacaccatcaaactcactagcttaatggccaacact
gtggtccaaacttacaacaccggcaaacccgtgtggagctgctgctggtgccatgacaac
aacaactacatctatgctggtctaagcaacggctccgtgctggtgtacgacacacgtgac
accagcactttcgtccaggagttagcacctttgcgatccagttgtccggtggtgtctctg
tcctacatcccccgtgccgcctccagttcatttccatccggcggtctcatcaccggcacg
ctggagggcggctgcttttgggagcacaaggagggaactgtgtacatgcctcacattcta
cctctggagtctggtaactgcacagatatacaggtggagccggacagcagacactgtctc
atcacatacaggcctgggcgatccaacccagccttgcgttgtgttttgatggaactcaat
cgaagccccgagtcagacaacggccagccgcctgtctgctcttgttccccggtccagact
ttcacagccggctcctcgtgcaagttactcaccaagaacgctgtctttaagagtccagct
ggagagggatccacattcgtgtgtgctggagatgagagcacaaactccaccatggtatgg
aatgcaggaacaggtgctttacttcagaaattccctgcagatcttcctgtactggacatc
tgtccgtttgaggtgaaccagagcagttatctggcatctttgactgagaagatgttaaag
atctataagtgggagtga
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