Triplophysa rosa: 130552044
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Entry
130552044 CDS
T09216
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
tros
Triplophysa rosa
Pathway
tros04110
Cell cycle
tros04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130552044 (smc1b)
04114 Oocyte meiosis
130552044 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130552044 (smc1b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130552044 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
130552044 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
130552044
NCBI-ProteinID:
XP_057186103
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Position
LG3:complement(7017434..7026093)
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AA seq
1231 aa
AA seq
DB search
MGYLRQLDVENFKSWRGKQTIGPFKRFDCIIGTNGSGKSNVMDALGFVMGERAVNLRVKH
TRDLIHGAHIGKPVSTSASVTMIYCGDNDEELVFNRSILGESSEYRVNGKQVTLAKYTGD
LEKIGIVVKAKNCLVYQGAVESIAMMNAKERTKMFERISNSQELNEEYDVKLAALHKAKE
DTQFHFNKKKAATAEKKQVFKDKTEAEKYQAQVDEVGEQKLQLMLFQLFHNEKKIEAQSE
SLRDKQMAVSEQKSNLDVWEQSVKAQKKEHGRLTRDLQRLEKEIRSQEQILNHQRPQYIK
SKVNTSHHEHKLEEVRRTLQKNQTQRAKKEQELEELRRELVELERCWRSCVKQMEEEEAQ
RGAGVQLDEAQMVHYKELKELARKRTAILNQSAEKLHREVQADSEKLQFDLRRKNEIQVD
IKHSQTQLEDLSRRAEKLEEYANTSKKTLEEQHQQEKGLVEELERGRIRIQEVNAELAQV
ITELQNARLDSQESRRQQKRNEVLESLRRLYPDAVYGRLVDLCQPIHKKYQLAVTKVFGK
NMNAIVVTFAKVAHDCIRFLKEERAEPETFLPIDYIDVRPLNERLREVRGAKMVVDVVQC
AQNAPQLKRVVQYVCGNSLVCETLKEARRIAFDGPERLQTVALDGTLFRKSGVISGGAVD
LSSKARRWEEKDMNKLREQKERLTAELRDLLRQRRKEAELNQIRAQSQGIQTRLKYSSTE
LDTIRKKHIPACQAEISRLGSELSNLEAEVEIQMQAIELKDNELKAIRDQIHQMEDVVFA
DFCAEISVANIREYEQDYFRLQQELEKKRLQFESQCTRLSTQLDYEQTHLEKLVTQMKRL
EETIHKEENIISSLKEEEDRLMIAMEETQFNLLELNNQLVGKMSLVNDAKAQLEKNNKSL
QEKSRVLVKLQKEAISAEAAMERLRLSKHNLLLACKIECLPLKLLAGSLDDISDIELDPE
SQSISTLDIYEREAQIEFDYSALDMSLKALTEESEVEAELEKLKEEVSSLECLIMASRAP
DLKALEKMREVKDNFHEVMDAFKNSTHNTKKCSQEFEQVKTKRLNLFSQCFEHVSVVIDQ
IYKKLCRNTSAQAILSAENPNEPYLGGINYNCVAPGKRFMAMDNLSGGEKSIAALALVFA
IHSFRPAPFFVLDEVDAALDNTNIGKVTGFFRELSRESCQIIVISLKEEFYSRADALIGV
YSMFDECMYSRVLTLDLTPYPLNDENGSQRE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttaagacaattagacgtggaaaattttaagtcttggagaggaaagcaaaca
atcggtccatttaagagatttgattgtataattggtactaatggttcgggcaaatctaat
gtgatggatgctcttggatttgtgatgggagagagggcggtcaacctccgtgtgaaacac
acaagagatctcatccatggtgcccacatcggcaagcctgtgtccacctctgccagcgtg
accatgatctactgtggagacaatgatgaggagttggtcttcaatagaagcatcttagga
gaatcctctgagtaccgtgtgaatggtaagcaggtcactttggctaaatacactggagac
ctggagaaaattggcattgtggtgaaagcgaagaactgcctggtgtatcagggtgctgtg
gagtctattgccatgatgaacgctaaagagcggacaaagatgtttgaaagaatcagcaac
tcccaagagctaaacgaggagtatgacgtcaagcttgcagccctacacaaggccaaagag
gacacccagttccactttaacaagaagaaagcagctacggctgagaaaaaacaggtcttt
aaggataagactgaggctgaaaaatatcaggcgcaggtggatgaagtcggagaacagaaa
ctccagctgatgctctttcagctcttccacaatgagaaaaaaattgaagcgcagtcagag
tcactgagagataaacagatggccgtgtctgagcaaaagagcaacctggacgtctgggag
caatctgttaaggctcagaaaaaagaacatgggcgcttgacccgagaccttcagcgtctg
gaaaaggagatcagatcccaggagcaaattcttaatcatcagagacctcaatacataaaa
tccaaagtgaacacctcccatcatgagcacaaattggaggaggtgcgcagaacgcttcag
aagaaccagacacagcgggccaaaaaagagcaggaactggaggagctaagaagagagttg
gttgagctggagaggtgctggaggtcttgtgttaagcagatggaggaagaggaggctcaa
agaggagccggtgtgcaactagacgaggctcagatggtgcactataaggaacttaaagag
ctggccaggaagaggacggccattttaaatcagagcgctgagaagctgcacagggaggta
caggccgactccgagaagcttcagtttgacctcaggaggaaaaatgaaatacaggtcgat
attaaacactcccaaactcagctggaagatttaagcagaagagcagaaaagctggaggag
tatgccaacacttctaaaaaaaccctggaggagcagcatcagcaggagaagggtctggtg
gaggagctggagagaggccgcatacgtatacaggaagtaaatgcagagctggcgcaggtg
ataacagaactgcagaacgctcggctggacagccaggagagccgacgacagcaaaaacgc
aatgaagtattggaaagccttagaagactgtaccctgatgcggtgtatggccgtctggtt
gacctgtgtcagcccatccataagaaataccagctcgccgtcaccaaagtgtttggaaag
aacatgaatgctattgttgtaacatttgccaaagtagctcacgactgcatcagatttcta
aaagaggaaagagccgaaccagagactttccttcctattgattatatagatgtacgccca
ctgaatgagcggttgagggaagtgcgtggagctaagatggttgtggatgtggttcagtgc
gctcagaacgcccctcagcttaagcgagtggtgcagtatgtatgcgggaactccctggtc
tgcgagactctgaaggaagcccgtcgcattgccttcgatggtcctgagcgccttcagacg
gtggcccttgatggcaccttgttccgcaagtctggggtgatctcaggaggcgctgtggac
ctgagcagcaaagctagacgctgggaggaaaaagatatgaacaaactgagggagcagaag
gagcgcctgacagctgagcttcgtgatctattgaggcagaggcgtaaggaggcagagttg
aatcagatcagagctcagtctcagggaatccagactcgcctcaaatactccagcacagaa
ctggacaccatacgcaagaagcacatcccagcgtgtcaggcggagatttctagacttgga
agtgagctttctaaccttgaggctgaggttgagattcagatgcaggccattgagctgaag
gacaatgagttgaaggccatcagagatcaaattcatcagatggaagatgtggtgtttgca
gacttctgtgcggagatcagtgtggcaaacatccgggaatatgagcaggattatttccga
ctgcaacaggagctcgagaaaaagcgcctgcagtttgagtcacagtgcactcgtctaagc
acccagctggactatgagcagacccatctggagaaactcgttacacagatgaagaggctg
gaagagactatccacaaagaagagaatatcattagcagtctgaaagaggaagaggacaga
ctcatgatagctatggaggagacacaatttaatctcctagagctaaacaaccagctggtg
ggaaagatgagtttagttaatgatgcaaaagctcagcttgagaagaacaataaaagcctc
caggagaaatccagggtactggtgaaacttcagaaggaagcgatcagtgctgaggccgcc
atggaacgtctgagactgagcaaacacaacttgcttctggcttgcaagatagagtgctta
cctttaaaactgctcgctggatcactggatgacatcagtgacattgagctggacccagag
tctcagagcatcagcacgctggacatttatgagcgggaggcacagatagagtttgattat
tcagcactggacatgagccttaaggccctcactgaagagagtgaagtggaggctgagtta
gagaaactcaaagaggaagtctcttctctggagtgtctgattatggcatccagagctcca
gacctgaaggctctagaaaagatgagagaggtgaaggacaacttccatgaagtcatggac
gcgtttaagaacagcacacataacactaagaaatgcagtcaggagtttgagcaggtgaag
accaaacgcttgaatttgttcagccagtgtttcgagcatgtatctgtcgtcatcgatcag
atctacaaaaaactctgcaggaacaccagtgcacaggccattcttagtgctgagaatcca
aatgagccctacctgggcggcatcaactataactgcgtggcacctggtaaacgtttcatg
gctatggacaacctgtcaggaggagagaagtccatcgctgctctcgcgctggtctttgcc
attcacagctttcgtcccgcaccgttcttcgtgctggacgaggttgatgccgccctggac
aacacaaacattggcaaggttacgggatttttccgtgagctgtcaagagagagctgccag
atcatcgtcatttccctgaaagaggagttttactcacgagcagacgctcttattggggtc
tattctatgtttgatgaatgcatgtacagccgtgttctcaccctggatctcaccccttac
ccactgaacgatgagaacggcagtcagagagaataa
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