Triplophysa rosa: 130552054
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Entry
130552054 CDS
T09216
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon
KO
K12327
caldesmon
Organism
tros
Triplophysa rosa
Pathway
tros04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
130552054 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130552054 (lsp1a)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130552054 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
130552054
NCBI-ProteinID:
XP_057186119
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Position
LG3:complement(13221973..13254334)
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AA seq
569 aa
AA seq
DB search
MSSTIMRRNSSKQGLQNLLRVTAQRSVEDAEEIERERRRRAREAFRKQESLSGSTGSPQD
SVTPPDASPYESDFKPSNPTALDEDEGFSDWTQKLDRRTRARTEENGCAEESPDEDRRLL
ARSMQKTSLTTSIQHQQTPDREQEVEEVEEKRPVRRSVERRMEIERVSSQRPEEGHDIRE
IKGKQEEPKTPLENKMKEARSEVKVSYTSKVFLQQDKMPNGNEEAAVEEVTSRLVKTKRS
PRSIGVHNTLESKKEMDTGLETEMKLEKIRRSHQEKESQEMEQLRQRQAEAELELEELKK
KREERRRFREEEEQRKEEEEQQKLNKKEEEKKQMKEEIERRRMEAAEKRMKNLNVSITDG
DDPFNPLNPKSPTAKITERTESLNRSLKKSNSFKKTQRPVLLPKIDDKLEQYTQAIEISS
KEIKMNKAASVDMSCVSAPVASKKNLFEAGEAWNQTTLKGTPTKDTDCVKVGVATLINHW
VKGSPEDGNKNSPSTPSDVKPGDVLQKKNMWEVIGEAEKSGLGGKGSSSGKRYKFVVTGH
GKYEKISIDGDHYIVYPNGKSIDFSSEDL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtacaatcatgagacgaaactccagcaagcaggggctgcagaacctcctgaga
gtgacggcccagcggagtgttgaagatgcagaagaaatcgagagggaaagacgacgtcgg
gcccgagaagccttccgcaaacaagagagcctgtctggatccacggggtcccctcaggac
agcgtgaccccgcccgacgccagcccctacgaaagtgacttcaaacccagcaaccctaca
gctctcgacgaagatgagggctttagcgactggacccaaaagctggacagaagaacacga
gccagaacggaagagaacggctgcgcagaagagtcaccagatgaggacagaagacttctc
gcaagatctatgcagaagacaagcttgaccacctcgatacagcatcaacaaaccccagac
agggagcaggaggtggaagaggtcgaggagaaaagaccagtgagaagaagcgtcgagagg
cgtatggagatcgagagggtgagcagtcagagaccagaggaaggtcacgatatcagagaa
atcaaaggaaaacaagaggaaccaaaaacaccactagagaacaagatgaaagaggcaagg
agtgaggtgaaagtgtcttacacttctaaagtcttcctacagcaagacaagatgcctaat
ggcaatgaagaagcagctgtagaggaagtgacatcacggctggtcaaaaccaaaagatct
ccaagaagcataggtgtgcacaacacccttgagtctaaaaaagagatggacactggtctg
gagacagaaatgaagctcgagaagattcgacgcagccatcaggagaaggaaagtcaggag
atggagcaacttcgccagcgtcaggccgaggctgagctggagcttgaggaactgaagaag
aagagagaggaacgccgtcgattccgtgaggaggaggaacagagaaaggaggaagaggaa
cagcagaaattaaacaaaaaagaagaggagaagaagcagatgaaggaggagattgagaga
aggaggatggaggcggcagagaaaagaatgaagaatctcaacgtctccatcacagatggc
gatgatccatttaaccctctgaaccccaaaagtccaactgctaagatcacagagagaacc
gagtctctgaaccgatctttaaaaaagagtaacagctttaagaagacccagagacccgtg
ctgctgcccaagattgatgacaaactggagcaatacacacaggcaatagagatctcctcc
aaagaaataaagatgaacaaagcagcatcggtggatatgtcatgtgtgtctgcaccggtg
gcatctaagaagaatctgtttgaagcaggggaggcctggaatcaaaccaccctgaaaggc
acaccgacgaaggacacagactgtgtgaaagtgggtgtggcaacccttatcaaccattgg
gtgaaaggaagtccagaggacgggaacaaaaactccccttccacaccatctgatgttaaa
cctggagatgttctgcagaaaaagaacatgtgggaagttatcggggaagccgagaaatca
gggctgggaggaaagggctcctcttcgggtaaacggtacaagtttgttgtgacgggacat
ggcaaatacgagaagatttccattgatggtgatcattacatagtctacccgaatggaaaa
tcaattgacttttcctctgaagacctttga
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