KEGG   Triplophysa rosa: 130552169
Entry
130552169         CDS       T09216                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
  KO
K06245  laminin, beta 4
Organism
tros  Triplophysa rosa
Pathway
tros04510  Focal adhesion
tros04512  ECM-receptor interaction
tros04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:tros00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130552169 (lamb4)
   04518 Integrin signaling
    130552169 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130552169 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMB1 LAMININ_IV_B EGF_LMN_ATRN LAMB4 F5_F8_type_C
Other DBs
NCBI-GeneID: 130552169
NCBI-ProteinID: XP_057186312
LinkDB
Position
LG3:complement(14052713..14075218)
AA seq 1819 aa
MLTGLEATAFLILWIAAPVHLQDECEGNSCYPHLGDLMVGRVAQLTASSTCGLYRPQSYC
ILGYLENVQKCFICDSRSPYSPYQNPNSHHIENVITTFEPERKLRWWQAENGVHEVSIQL
DLEAMFQFSHLILTFKSFRPAAMLVERSKDFGQTWKVFRYFAEDCASSFPSIPEGPADSL
DDVICDSRYSGAEPSTDGEVVLKALDPSFKIHDPYNPTIQELITITNLRLNFTRLLTLGD
TLLSRRRRNPEDKYYYALYEMVVRGTCFCNGHASKCVPLDSVRGDTFREPGMLHGRCVCQ
HNTAGYNCERCQDFYHDAPWRPGEETDWSVCRRCNCNGHSEKCHFELARYLATGGVSGGV
CENCRNNHVGPQCELCGPYYYQDPQRFVEDPDACIPCECNPDGSVDGGLCDPVTGQCVCK
QNVEGVRCDRCKFGFYGFSRDDPSGCQLCGCNFIGTIRTGNPCDQTTGRCICEHSAQGPQ
CDECLPGYWGLGNTVYGCIPCDCDIGGARRTECSSEDGQCECRPNMVGLRCSDPAAGYFL
APLDFYIYEAENAVPLVALPLVKPERPTKLPLCPVAPKPPPTPKQEVPYPTIPSAVTPAT
SKYPVTLPICEHYFRQRGYDFKITNGMIVVIKREKRHARRRRQDQRTISFEPGLSLQIIP
RQRTPDKPVTWTGLGFVRVQDGAGLRFTITDIPSTLDYYLVVRYEPESTDDWTATVHIVS
LGSGDGSCPNDPSDKVFTLPGSVRAATLDVPLCLRSGDQYHMEFTFRKQPNANHLSSSFI
LIDSLGLIPKMDSLPNFCLKSHLAEFQQYRCIELGAQVGEHTLPKVCERLIGSISAFIHN
GAVTCNCHQVGAYDSSCSKFGGQCECKPNVIGRCCDSCAPLTYGFGLDGCSLCDCDPSGS
TAELCDQRTGQCPCRDGVTGRRCDKCYPGYYGFPLCRPCQCNKLADICDPVTGVCLNCRD
HSTGPDCERCKDGFVGDPISEEPCEPCLCPELKGNGPFFAISCNKDPYSGVPYCECLPGH
TGLRCDMCAPGYYGDLRLPGARCDECYCNKNIDPGDGDACDALTGECLRCLRNTEGPRCQ
SCKRGYYGNALAQDCKECSCDPRGTEVSKCAAGSPCFCDQETSQCPCRPGVEGGLCNECV
DGYWNLDGESGCQPCNCDPENALSNVCDKITGQCLCPPDYGGRQCDECGPNHFGDPDIQC
MSCDCNMEGTIYPACDPNTGECLCKPGVTGLFCDECGPGHNTNFPICEPCHTCNQLWEKI
VSDVKLDTERMETIMPCPENSRPIPDLERLQLLLEKLQSQLNVTDVDEVKKLEKLLAQIR
NETETIDPNLIIIDPSPLLNTDIDNIHLEFNRLLKNLQEKIKDIPVTDVKALNDNLNKIR
KLYDEFTENEKKVEAAKKAQEASKKTRANVTLELTKCRIGEINKLEKNVNALSVAKLNEE
ICGAPGDVKCEQAKCGGASCGKCGGPGCAGSLPISLDASRRSELTMKNITDLHSKLKEDA
AKLINMTKLTDDIKDQAEDMMDQMNQSKDRFEKEKTNTKKLLENIKNYLTDELVKPEDIE
KLAKAVLSIQLPKSPDDIKKMIEDIKNILANVTGFNEDLERLEKEAKIAEDMKERAKDIL
DRTKPIDVKDIEKALNDTAELHEKIVKDLAKAEDNNDIINEKLNETTPKLERIEDNLNST
RTKELLDEMEALNGKTEMNRVQGKEAKDAADVALNSAEDANKDLEELKEQFEKLKSNNKN
QSVNDEASERLKNITMETEKLAKDVEDKMKQIEDLEKRILDAAQRKEEKMKDLEDLQKEA
NDLKNFIVDKVEKYGLCST
NT seq 5460 nt   +upstreamnt  +downstreamnt
atgctgactggattggaggcaacagcgttcctgattctctggattgcagctccagttcac
ctccaggatgaatgtgaggggaattcgtgttatcctcacctcggtgacctcatggtgggc
cgtgtcgcccaactcactgcgtcctctacctgtggcctctacagaccacaaagctattgc
atcctgggatacctggagaatgtgcagaagtgcttcatctgtgactctagaagcccctac
agtccctaccagaatcccaacagccatcacatagagaacgtcatcaccacctttgaacct
gagcgcaagctgaggtggtggcaggctgagaatggtgtgcatgaagtcagcattcagctg
gacctggaagcaatgtttcaatttagtcatctgatactgacgttcaagagtttccggcct
gctgccatgttggttgagaggtcgaaggacttcggtcaaacgtggaaggtcttccggtac
ttcgcagaagactgtgccagctcgttccccagcatccccgaagggccagcagatagcctt
gatgatgtcatatgtgatagtcgctattccggggcagaaccttccaccgatggggaggtg
gtgttaaaagctttggatcccagctttaaaattcatgatccatacaaccccactatacaa
gagctgatcaccataacaaacctgcgcttaaacttcacacgtctcctaaccctgggcgac
actttgctctcacggcggagaaggaacccagaagacaagtattattacgccctctatgag
atggtggttcgggggacctgcttctgcaatggtcacgccagtaagtgtgtccctctggac
agcgtacgtggagacaccttcagggagcctggcatgctgcatggtagatgtgtttgccaa
cacaatacagctgggtacaactgtgagcgttgtcaagacttttaccatgatgccccctgg
aggccaggtgaagaaacagactggagtgtttgcagaaggtgtaactgtaatggtcactca
gagaagtgtcactttgagctggctcgctacctggccaccgggggggttagtggtggcgtg
tgtgaaaactgcaggaacaaccatgttggacctcagtgtgagctgtgtggtccttattac
taccaggacccccagcgctttgtggaggaccctgatgcatgtataccttgtgaatgtaat
ccagatggttcagtggacgggggactctgtgatccagttactggccagtgtgtgtgtaaa
cagaatgtggaaggggtgcgctgtgaccggtgcaagtttggcttctacggattcagccgg
gacgaccccagtggctgtcagttgtgtgggtgtaatttcattggcaccattcgcacgggc
aacccttgtgatcagaccacaggaaggtgtatctgtgagcactctgctcagggcccacag
tgtgatgagtgtctgccaggttactggggcctagggaatacagtgtatggctgtatacct
tgtgactgtgacattggtggcgcccggagaactgaatgttcctcagaagatggccagtgt
gaatgcaggcctaacatggtgggtctcagatgtagtgaccccgctgctggatatttcttg
gctccacttgatttctatatctatgaggctgagaacgcagtgcctctggtggctctacca
ttggtgaaacctgaaagaccaaccaaacttcctctttgcccggttgccccaaaaccccct
ccaacacctaaacaagaagtgccctaccccacaataccctcggcagtcactcctgccaca
tcaaagtatcctgtcaccctaccgatctgtgagcactacttcagacagaggggttatgac
ttcaagatcaccaacgggatgattgtagtgatcaagcgtgagaaacgacatgccagaagg
cgaagacaagaccagagaaccatcagctttgaaccaggcttatctcttcaaatcatcccg
agacagcgcaccccagacaagcctgtcacttggactggacttggtttcgtgcgagttcag
gatggagcaggactcagatttaccatcacagatataccatcaactcttgactactattta
gttgtccgctatgaaccagagtccactgatgactggacagcaactgtgcatattgtatct
cttggatcaggagatggaagttgtccaaatgacccatcggataaagtctttactcttcca
gggtctgtaagggcagccactctggatgttccattgtgtctccgctcgggtgatcaatac
cacatggagtttacttttaggaaacagcctaatgccaaccatctgtccagctcattcatc
ctaatagactcgctgggtctcattcctaaaatggattcccttccgaacttctgcttgaag
tcacacctagctgagtttcaacagtaccgctgtattgagttgggagcgcaggtgggagag
cacacacttcccaaagtatgcgagaggcttattggaagtatatccgcctttattcacaat
ggtgcagtcacttgcaactgtcatcaagttggagcgtatgactcatcctgcagtaaattt
ggcggacagtgcgaatgcaagccaaatgttataggccgctgctgtgattcatgtgctcct
ctgacgtatgggttcggactcgatggttgctcactatgcgactgtgatccgtctggctct
accgctgagttgtgtgaccagagaaccggtcagtgtccatgtcgagatggggtgactggc
cgtcgatgtgataaatgttaccctggttactatgggttccccctgtgcagaccttgccag
tgcaacaagcttgccgacatatgcgaccccgtcactggagtctgtctcaactgcagggat
cactccacgggacccgactgtgaaaggtgtaaagatggttttgttggtgaccctatctct
gaggaaccttgtgagccatgcctttgcccagagctgaaaggaaatggacctttctttgct
atttcctgtaacaaagatccgtactctggggtcccatactgtgaatgcctgcctggacat
acaggcctacgctgtgacatgtgcgctcctggttactacggtgacctgagattgccaggt
gcccgatgcgatgagtgttattgcaacaagaacatcgacccaggtgatggcgatgcatgt
gatgctttaactggcgagtgtttgcgctgcttgcgcaacaccgaggggccacgctgtcag
agttgcaaacgtggatactatggcaatgcactcgctcaagactgcaaagagtgttcttgt
gacccgaggggcacagaggtgtcaaagtgtgccgctggcagcccctgtttctgtgaccag
gagaccagccagtgtccgtgccggccaggtgttgagggaggcctctgtaatgagtgtgtg
gatggttactggaacctagatggagagtctgggtgccaaccatgtaactgtgacccagaa
aatgccctcagcaatgtctgcgacaagatcacagggcagtgcctctgtccgccagattat
ggaggcagacaatgtgatgagtgtgggccaaaccactttggagacccggatatccagtgc
atgtcttgtgactgtaatatggagggcacgatttacccagcctgtgaccctaacacgggc
gagtgcttgtgtaaaccgggagtgacgggtcttttctgtgacgaatgcggccctggtcac
aacaccaactttcccatctgtgagccgtgccatacctgcaaccagctctgggagaagatc
gtctcagatgttaaactagatactgagaggatggaaactataatgccttgtccagagaac
tctcggcctatacctgatcttgaacggttacaattgctgctggagaagctgcaaagtcag
cttaacgtgacggatgtggatgaagtaaaaaaactggagaagctcttggcacaaattagg
aatgaaacggagaccatagacccaaacctaataattatcgatccaagcccactgctcaac
actgacatcgacaacattcaccttgagttcaataggctgttgaagaatctacaagagaag
atcaaagatattccagtgaccgacgtaaaagctctaaatgacaatttgaacaagatcagg
aagctctatgacgagttcactgagaatgagaagaaagtggaagcagctaagaaggcccaa
gaagcctccaagaagacgagagcgaacgtcacactggagcttaccaaatgtcgcatagga
gaaataaataaactggagaagaatgtgaacgctctgagtgtagccaaactgaacgaggag
atctgtggagctccaggtgatgtgaagtgtgaacaggcaaaatgtggtggagcttcatgc
gggaagtgcggaggtccgggctgtgcggggagtttacccatcagcctcgatgcctccaga
cggtcagagttgactatgaagaacattacagacctccacagtaaactcaaggaagacgct
gcaaagctcattaacatgacaaaattgaccgatgacatcaaagatcaggcagaggacatg
atggatcaaatgaatcagtctaaagacagatttgagaaggaaaagactaacaccaagaaa
cttctagagaatatcaagaactacctgacagatgagctggtgaagccggaggacattgag
aaactggccaaagctgtgttgtcaattcagctgcccaagtcccctgatgacatcaagaag
atgatcgaggatatcaagaacatcctggcaaacgtcacgggcttcaatgaagatcttgaa
cgcttggagaaagaagccaaaatagctgaagacatgaaagagagggcgaaagacatttta
gacagaacaaagccaattgacgtgaaagatattgagaaagcgttgaatgatacagccgag
cttcacgaaaagattgtcaaagatctggccaaggcagaagacaacaatgacatcatcaat
gaaaaacttaatgaaactactcctaaactggaaagaattgaggataatttaaattcaacc
cgaacaaaagaattactagacgaaatggaggccttaaatggcaaaacagaaatgaacaga
gttcaggggaaagaggccaaggatgcagccgatgttgccctcaacagcgccgaagacgcc
aataaggatcttgaggagctgaaggagcagtttgagaaattaaaatcaaacaacaagaac
cagagcgttaatgatgaggccagtgaacgtctgaagaacattacaatggagacagaaaag
ctggctaaagacgttgaagataaaatgaagcaaattgaagacttggagaagaggattcta
gatgcagcccaaagaaaagaagagaagatgaaagatttggaggacctccagaaggaggca
aacgatttgaagaacttcattgttgacaaagtggaaaaatacgggctgtgctccacatag

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