Triplophysa rosa: 130552189
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Entry
130552189 CDS
T09216
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
tros
Triplophysa rosa
Pathway
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130552189 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130552189 (lamb1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
ATG17_like
Motif
Other DBs
NCBI-GeneID:
130552189
NCBI-ProteinID:
XP_057186346
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All DBs
Position
LG3:complement(14021229..14041743)
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AA seq
1524 aa
AA seq
DB search
MVVRGNCFCYGHASECAPVDAAGEVMDGMVHGHCMCNHNTMGLNCEHCQDFYHDLPWRPA
EGRNTNACKKCNCNFHSDSCHFDMAVYQASGNTSGGVCDDCQHNTMGHKCQQCKPFFYQH
PERDIRDPNICEPCNCDPVGSLYGGICDALTDVSFGLISGQCRCKPNVEGERCDQCKQGH
YGLSEDHLGCQPCTCNSLGTVPGGSPCDTDLGNCYCKRLVTGQNCDQCLPQHWGLSNDMD
GCRPCDCDHGGALNNNCSPQTGQCQCREHMFGRRCDQVESGFYFIALDHYTYEAEDAKFG
PGVTVVPRPHPQDRSPSWTGIGFVNVPEGAYLEFSIDNIPYSMEYDIVIRYEPQLPEQWE
EVLMTVIRPRVITADSRCANTMPDDDNQIVSLHPGSRYVVLPRPVCFEEGLNYTVRLSLS
LYSALSDIQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGDLMTNSAWETFQRYRCLESSQA
VVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTVCDPSGGKCQCRTNVVGRNCDK
CAPATFLFGPQGCRPCDCSPEGSVHDFCREATGQCECIPGAYGRQCDHCLPRHWGFPNCR
PCTCNGHAEQCDPNTGQCLSCRGYTTGHNCERCLNGYYGDPVLGSGDHCRPCMCPDGPDS
GRQFSSACYKSLESDQVFCVCNKGYKGARCEECAPGYYGNPHEVGGECRPCQCNNNIDMM
DPVSCDARTGTCLKCLYHTEGEGCDRCKLGYYGNALNQSCRKCVCNIMGTAAETCPSQGN
CNCDLSSGQCQCLPNVVGQRCDQCAPDTWNMASREGCEVCDCDPNHSSGTSCNEITGQCT
CKPGFGGRSCRECRELFWGNPEVKCHACDCDPRGIAEQQCNKVTGHCVCVKGVSGPRCDT
CARGYSGEFPHCERCHQCFAEWDIIIGDLTNQTHRLVQKVNTIKASGITGPYQSTINNVE
SSANSIRDILAQNPATEPLTEIQGLLEQAAALMAEMNKNLNLTEESLSEISNDNNSTYTK
LNSLKEEAEKLKQTVKDLQEQVEFVKNSDIRGAGASVTRYYQQSQEEETRANASVSDPYN
LVNRSAALRSETEDLMNQTKEEFNQRQEEFSKQLDDLAGQLETLDLSELSEKTCGRPAGS
ENCVDSPCGGLSCVDAEGNRKCGGEGCDGITTLAHNAWQKAKDFDLEISSAMEEVDKLSK
MVSEAKVKADEAKLNAQEVLTKTNETKRRVDGSNEELRQLIKQIRDFLTQDGADLESIEA
VANEVLEMQVPTTPAQLHNLTEEIRERVSSLSDVEDILNQSAADIMRAEALLEQARKARK
DATDVKETAGVVKEALQSAEQAQTSVTEALKRASANIKGTQSLLVSVESETSDSELKLSN
ATRSLLQLESDVALMREKALNTSISVNSTEKTTESINQLTERLRKELDSELKDKYSTVEE
LITQKAEGVAEARKQAKALQQEAKDLLLQANDKLKLLKDLEKSYDENQKVLEDKANELVE
LEKAVRDLLQEISHKVTVYSTCLF
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgagggggaactgtttttgctatggtcacgcgtctgaatgcgcccccgtcgat
gcagctggagaggtcatggatggcatggtccacggtcattgtatgtgtaatcataacaca
atgggtctgaactgtgagcactgtcaggacttttatcatgacctgccctggcggcctgca
gagggacgcaacaccaacgcctgtaaaaagtgcaactgtaactttcactcggactcctgt
cattttgacatggccgtgtaccaggcatcgggcaacacgagcggcggcgtgtgcgacgac
tgtcaacacaacaccatgggccacaagtgccagcagtgcaagcccttcttctaccagcat
ccggaaagggacatccgcgaccccaacatctgcgagccctgtaactgtgatcccgttggc
tctctctacggaggaatctgcgacgcgctgacagacgtgtctttcgggctgatctcgggt
cagtgccgctgtaagcccaatgtggaaggagagcgctgtgaccagtgcaaacagggccat
tacggactcagtgaagatcacttgggatgccagccatgcacttgcaactctttgggaaca
gtaccgggcggcagtccgtgcgatacagacttaggaaactgctactgtaagcgtttggtc
accggacagaactgcgatcagtgcctgccgcagcattggggtctcagtaatgacatggat
gggtgccggccatgtgactgcgatcacggaggtgctctcaataacaattgttctcctcaa
actggacaatgtcagtgtcgcgagcacatgttcggcagacgctgcgaccaggtggagtct
ggtttttacttcattgcgttggaccactacacttatgaagcagaagatgccaagtttgga
cctggtgtaaccgttgtcccgagacctcaccctcaggacagatctccttcttggaccggt
attggttttgtgaacgttcccgaaggtgcctatcttgaattcagcatcgacaacatcccc
tactccatggagtatgacatcgtcattcgctacgaacctcagttgccagagcagtgggag
gaagtgttgatgactgtcattaggcctcgcgtcatcaccgccgacagccgctgtgccaac
acaatgcctgatgatgacaaccagatagtgtctctgcatcctggatccaggtatgtggtg
ctgccccggcctgtgtgtttcgaggagggtttgaactacaccgtgcgcttgagtctctct
ctctactcggctctcagcgacatccaatctccatacacgctcatcgattctatcgtgctc
atgccccactgcaaaaacctggacattttctctggctctggatcagagggaggggatttg
atgaccaacagcgcctgggaaaccttccagcggtaccgctgtctggagagcagccaagcc
gtggtgaaaacccccatgactgatatctgcagaaattacatcttcagcgtctcggccctt
ctgcaccagggagttaaagcgtgtcagtgtgaccctcaagggtctcttagcaccgtctgt
gacccgagcggcgggaagtgccaatgtcgaaccaatgtagtcggccgcaactgcgacaag
tgcgccccagccaccttcctgtttggaccacagggctgccggccctgtgattgtagtcct
gagggatccgttcatgatttctgtcgcgaggccactggtcagtgtgagtgtattcctgga
gcgtatgggcggcagtgtgatcactgtctgcccagacactggggcttccccaactgtcgg
ccctgtacctgcaacggtcatgccgagcagtgcgaccccaacaccggacagtgtctgtcc
tgcagaggatacaccaccggacacaactgtgagagatgtttgaatggatactacggtgac
cctgtcctgggctctggagaccactgccgtccctgcatgtgccctgatggacccgacagt
gggcgacagttctccagcgcgtgctataagagtctggagtcggaccaggtgttctgcgtc
tgtaacaagggatataaaggtgccaggtgtgaagagtgcgcccccgggtattatggaaac
ccgcacgaggtgggcggagagtgccggccgtgtcagtgcaacaacaacattgacatgatg
gaccccgtgtcctgcgatgcccgcacgggtacctgtctcaaatgcctgtaccacacggag
ggcgagggatgtgaccgttgcaagcttggttactacggcaacgccctaaatcagagttgt
agaaagtgcgtgtgtaacattatgggcacggctgcagagacgtgcccctctcagggtaac
tgcaactgtgatttaagcagcggtcaatgccagtgtttgcccaatgtggtgggtcagcgc
tgcgatcagtgcgctcctgacacctggaatatggccagcagggaaggctgtgaggtctgc
gactgcgaccccaatcattcctcaggcacttcctgtaatgagattactggccagtgcact
tgtaaacccgggtttggtggcagaagctgcagggagtgcagagaactcttctgggggaac
ccagaggtcaaatgccatgcgtgcgactgcgacccaagaggcatcgcagagcagcagtgc
aacaaggtcacgggtcactgtgtgtgcgtgaagggcgtgtccgggcccagatgtgacacg
tgcgcccgcggttactccggcgagtttccacactgcgagcgctgccaccagtgcttcgcc
gaatgggacataatcatcggcgacctcactaaccaaacacacagactggtccagaaagtc
aacaccatcaaagccagcggcattacgggaccctaccaatccaccatcaataacgttgaa
agcagcgccaactcgatccgcgacatcttggcccagaatccagccactgaacctctcacg
gaaatccaggggcttctcgaacaagccgctgccttgatggcggaaatgaacaaaaacctg
aatctgacggaggagagcctgtccgagatctccaatgacaacaacagcacgtacaccaag
ctgaactctctcaaagaagaagctgagaaactgaaacagactgtgaaggacctacaagaa
caggtagagtttgtgaagaactcggacattcggggtgccggagccagcgtgactcgctac
taccagcagtctcaagaagaggagactcgtgcgaacgcctccgtcagcgacccatacaac
ctggtcaatcggtccgccgccctgcggagcgagacagaagatctgatgaatcaaaccaaa
gaggagttcaatcaaaggcaggaggagttttccaaacaactggatgatctggctggacag
ctggagactcttgatttgtctgagctcagcgagaagacgtgcggaaggccagctggctcg
gagaactgtgtcgactctccgtgcggaggcctgagctgtgtggatgccgagggaaacagg
aagtgtggaggagagggttgtgacggtatcaccacgctcgcccacaacgcctggcagaaa
gccaaagactttgacctggagattagcagcgctatggaggaagtggacaagctctccaaa
atggtgtcagaagccaaagtcaaagcggacgaggccaagctgaacgcccaggaagttctg
accaagactaacgagaccaagcggcgtgtggacggcagcaacgaggagctgcgtcagctc
atcaaacagatccgagacttcctcactcaggacggagctgatctggagagcattgaggcg
gtggccaatgaagttctggagatgcaggtgcccacgacgccagcccagctgcacaacctg
acggaggagatcagggagcgagtgagcagcttgtcagacgtggaggacatccttaaccag
agtgcggctgacatcatgcgagcagaggccctgttagaacaagcccgcaaggccaggaaa
gatgccacagacgtcaaagaaacagctggagtggtaaaggaggctttgcagtcagccgaa
caagcacagacttctgtgaccgaggccttaaaacgggcctctgccaacatcaaaggaaca
caatcattgctggtctcggttgaatcagagacgtccgattcagagctcaagttgagtaac
gccacccgaagtctcctgcagttggaaagcgacgtcgctctgatgagagaaaaggctctc
aacacctccatcagcgttaacagcacagagaaaaccaccgagagcatcaaccaactgacc
gagcggctcagaaaggaactggattcagagctgaaagataaatacagtactgtagaggag
ctcatcacacagaaagccgaaggagtggcagaagccagaaaacaagcaaaggcgcttcaa
caggaggctaaagatctgctgctacaagccaacgacaaacttaagcttcttaaagatctt
gagaagagctatgatgagaatcagaaggtgttggaggacaaagccaacgagctggtggaa
ctagagaaagctgtgagggatttactccaagagatcagtcacaaagttactgtctacagc
acctgcctgttttaa
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