Triplophysa rosa: 130552250
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Entry
130552250 CDS
T09216
Symbol
hcn4l
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130552250 (hcn4l)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
130552250 (hcn4l)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
130552250
NCBI-ProteinID:
XP_057186451
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Position
LG3:9261264..9288448
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AA seq
1184 aa
AA seq
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MDKVNSSMRKRLYSLPHQFGHKSAMTRDGEDGDKDTRRKSVKMKHLPSPSSIGSTKGVSE
AKSGDAETDVGRPFRTNVNGDCRRFRGSLSSITSRHAPDADLAEQRRLITEGDASPEDDG
PLEQPGSGESQGAQGGRSEGAQQASSDEQSSFIKLEGIDQIMPDDERLYQAGFMHRQFGA
MLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLIMLLLMVGNLIII
PVGITFFKDEHTPAWIVFNVVSDTFFLVDLVLNFRTGIVKEDSTEIILDPQQIKVRYLRS
WFAVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQ
WEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVAKNKMVNDT
WGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHATALIQSL
DSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELNEPLREE
IISFNCRKLVATMPLFANADPNFVTSMLTKLRFEVFQPRDYIIREGTVGKKMYFIQHGVL
TVLTKGSKETKISDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNEVLEEYPMMR
RAFETVALDRLDRIGKRNSVLQHKVQRDLNSGVFNYQENEIIQQIVQHDRDMAHCAHLMQ
TPTLAPHPAPTPSSHTPVIWAPLIQAPLQAAAATTSVAIALTRHPHLPHALFRPPVPLLG
SLKDQPEFVKQFQTSLSGATAFGGSSSASSQFSSCIETPILDTLRTERSSTSTPAPPSSS
SLPSAITTTTSSITESSINPYRSLASHGSKDFSVAQLHSQPHQLPPASFPSFAASLPGFF
QKGAVGGEPIQLAIPPVSTLTPLIAHSVSPILTQLHSEQTNPQPTKPSQDLTKVTRTVSQ
SPIKESPICSKGMLEQVPIAPSQHPQTGQHPDVFYQLSQEPSALASLAQYGSGNASPCST
PSAWSPTCQSPTVEKMRMSTHSHPASISGSQSSLLTAQTLFPPPSRPRERGGSLVDLPSQ
DLSTISITLPTPGPPEKSKLVGRGPQPPDLSQHRGSASGFSPLPSPPAVIKPFSSIPGHV
VLSRQTSKLSISQTASSGGSPAHESSDRSAPSTPTLHPKLPSNL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggataaggtgaattcttccatgcgcaaacggctctacagcttgccacatcagtttgga
cacaagagtgctatgactcgagacggcgaagacggcgacaaggacactcggaggaagagt
gtcaaaatgaagcatcttccgtcaccctcttccatagggagcacgaaaggtgtcagcgag
gccaagagtggagacgcggagaccgatgtggggagacccttcagaaccaacgtgaacggc
gactgtcggaggtttaggggcagtctgtcttccatcaccagccggcatgccccagacgcg
gatctggcggagcaaaggcgcctcatcaccgagggggatgccagccccgaggacgacggt
cccttggagcaacctggatctggagagagccagggcgcacaaggtggtcgtagcgagggg
gcacaacaggcgtcctctgatgaacagtcgagtttcataaagttggagggtatcgatcag
atcatgccggacgatgagagattgtaccaggctgggtttatgcacaggcagtttggagcg
atgcttcagccaggggtcaacaagttctcgcttcgaatgttcggaagcgaaaaggctgtg
gagcgtgagcaggaacgggtcaaatccgcaggcttttggattattcatccatacagtgac
ttcaggttctactgggatctgatcatgctcctcctgatggtgggcaacttgatcatcatc
ccagtaggcatcacattctttaaagatgaacacacccccgcctggatagtcttcaatgtt
gtctctgacacgttcttcctggtggacctggtgttgaacttccgcacggggatcgtgaag
gaagacagcacggaaatcatcctggaccctcagcagatcaaggtgaggtaccttcggagc
tggttcgccgtggattttatctcttccatccctgtggattacatcttccttatcgtggag
acgcgcatcgactcggacttctacaagacggcgagggcgttgaggattgtgcgttttaca
aaaatactcagtctgctgaggctgctgagattgtcaagactgattcgatacatccaccaa
tgggaggagatatttcacatgacctatgaccttgcgagtgccatggtgcgcattgtgaat
ctgatcggaatgatgctgttgttgtgccactgggacggctgtctgcagttcctcgtgccc
atgctgcaggactttccctcagactgctgggtggccaaaaacaaaatggtgaatgacacg
tggggtcagcagtactcttacgccctctttaaggccatgagccacatgctgtgcatcggc
tacggcatgtaccctcccgtaggcatgacggatgtttggctgaccatcctcagcatgatt
gtgggcgcaacctgctatgccatgtttgtgggccacgcaactgccctcattcaatcactg
gactcctcacgaaggcagtaccaggagaaatacaaacaggtggagcagtacatgtccttc
cacaaacttccagcagacatgcggcagaggatccacgattactatgagcatcgctatcag
ggcaagatgtttgatgaggagagcattctgggagaactgaacgagccactcagagaggaa
atcatcagttttaactgtcgaaagcttgtggccaccatgcctttgttcgccaatgcagat
ccaaactttgtgacttccatgctcaccaagttgcgtttcgaagtgttccagccgagagat
tacattatcagagaggggacagtgggaaagaagatgtatttcatccaacacggcgtacta
actgtcctgacaaagggcagcaaagagacaaagatctcagacggttcttactttggagag
atctgcttgctgacccgaggtagaagaacagccagtgtccgagcggacacatactgtcgt
ctttactcgctctctgtggaccatttcaatgaggtgttggaggagtaccccatgatgcga
cgcgccttcgagactgtggctctcgatcgccttgaccgcataggaaagaggaactctgtg
ctccaacacaaggtccaacgggatctgaattccggagtgttcaactaccaagagaacgag
atcatccagcagattgtgcagcacgacagggacatggcccattgtgcccacctgatgcaa
acacctaccctggctccacacccagcacctacaccatcatcccacactcctgtcatctgg
gcgcctcttatccaggctcctcttcaagctgccgcagccaccacttcagtcgccatcgcc
ttgacacgccacccccatctgccccatgcgctcttccggccccctgtcccgctgcttggc
tctttgaaggaccaaccagagtttgtaaaacagttccagacatctctgtcgggcgccact
gcatttggcggctcctcatcagctagctcgcagtttagctcttgtatagagaccccaatt
ctggacacgctcaggactgagagatcatctacctccacccctgcaccaccatcgtctagt
tctctaccatccgctatcaccacaaccacttccagcatcacagaatcttccattaatccc
tatagatcccttgcctctcatggctccaaagactttagtgttgcccagcttcattctcaa
ccacatcagcttcctccggcctccttccccagctttgctgcatcccttcctgggttcttc
caaaaaggagccgttggaggagagcccatccagcttgcaattccccccgtatctaccctt
acccctttgatagcacattcagtaagtcccatactgacccaactgcattcagaacagact
aatcctcaacctacaaaacctagtcaggacctgactaaagttaccaggacagtttcccaa
tctcctataaaagagtcccctatctgctccaagggcatgctagaacaagtcccaattgcc
ccatcccagcaccctcaaactggtcaacatcccgacgttttctaccagctgtcccaagaa
ccatctgctcttgcttccttagcacaatatgggtcaggaaatgcatccccttgtagcacc
ccttcagcttggagccccacgtgccagagtcctacggtggagaagatgaggatgtccacg
catagccatcctgcaagcatctctggttcccaaagctctctcctgaccgctcagacacta
tttccgccaccgtcccgaccaagagaaaggggtggatcactggttgatttaccttcccag
gatttaagcaccatttctattacccttccaactccaggaccgcctgaaaagtccaagctg
gttggacgaggaccacaacctccggacttgtcccagcacagaggatcagcttcaggtttt
tcacctctcccctcaccccctgctgttatcaaaccatttagctcaatacctggtcacgtt
gttttatcgagacaaacttcaaagttgtccataagtcagactgcgtcctcaggtggatcg
ccggctcatgaatctagtgataggtccgcccctagcacaccaactttgcacccaaaactc
ccatcgaacttgtga
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