Triplophysa rosa: 130552275
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Entry
130552275 CDS
T09216
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130552275 (cdhr5b)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Cadherin related
130552275 (cdhr5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
DUF6039
Motif
Other DBs
NCBI-GeneID:
130552275
NCBI-ProteinID:
XP_057186477
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Position
LG3:2748637..2760272
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AA seq
762 aa
AA seq
DB search
MSFLTGLMKASVLAVLLLQWTTSHPVLGRYLEEEDSITRTDSFSPIELFPRDEADMTVDL
RSGSRRSWLQARQLGDIEFTNRYADLLKSKAKVTSMCSFLKRMQNSKKSKFSEGQNLCSV
EETIIFFPENNTVEAVVTSLTADAGVTANIIKEVPAGLFSINGLNVIAITVLDFETFDTM
YPYEVDIECTKDGFSPTTLNLRIIVQNINDNAPVFDLSEYTLNVNELLKEDTSIGQFKAT
DADEGDQIFYRLDPPEGDFGLADVFNPNILVKKLLDYDKVKKVTMTLYAQDTPLSSTPTV
SHTGSTTITVNIVDVDNRPPWFQPCTESQIGNSTVCISSGYTGTVNLTQQAVGPLSLMPG
PVRATDGDKGINEPIGYRFLEENEIFEINPDSGDITMKKPVDVAGPIVLMVMAFQKQNGD
QYATNTVILRVVSGSKHPPKFVKPNYEGFISEDAGVDSLVLESKTSNRPLRVQATDEDFA
NGVNPDIRFEVIGGTDFDITPEGFILMVQEVSIGSVNLQMRVVDTTNDESSTTSLTVEVT
PEDNRLRVGGYRAEDMAAVGASLAVVIVLCLVGIGLLAHHVKSHNSDWKKLSEASVFRSN
LGGGSGGPKEGVQYSNEGFQHDGDPGSVSSGLAADLDMKLESGARSSPEQMLKTASVPQT
RAAPDSSSLASADIEKEVKPILTKERRAEEGYKAVWFKEDIDPNTKEEVVIIPDTGEPAD
HDEDDDDEDDEEHMKTDMDEEAAGRFTRDSDSEDEEGLTSDL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttctcactggtctgatgaaggcgtccgtccttgccgtcttactcctgcagtgg
acaaccagtcatccggttctgggcagataccttgaagaagaagacagcatcaccagaacg
gacagcttctctcccatcgagctgtttcccagggatgaggcagatatgactgttgatctg
agaagcggttccaggagatcttggcttcaggcgaggcagctgggcgacatcgagttcaca
aacagatacgccgatcttctcaaatccaaagctaaagtcacctccatgtgttccttcctg
aaacgaatgcagaacagcaagaaaagcaaattcagcgaaggtcaaaacctctgctcagtt
gaggaaaccatcatctttttccccgaaaacaacaccgttgaagctgtagtcacttcactg
acagcagacgcgggggtcacagccaacatcattaaagaggtcccagcaggtctcttcagc
atcaacggcctcaatgtcatcgccatcactgtactggactttgagacatttgacacaatg
tatccctatgaagtggacatcgagtgtaccaaagatggtttcagccctacaacactgaat
ctgagaataatagtgcaaaacatcaacgataacgctcctgtatttgatctcagcgagtac
acactaaatgtcaatgagctactaaaagaggacacgagcattggacaattcaaagcgact
gatgctgatgaaggcgatcagattttctatcggctggatcctcctgagggagattttggc
ctagcagatgttttcaatcctaacattctggtgaagaaacttctggattatgacaaagta
aaaaaagtcaccatgactctttatgcacaggacacaccgttgtcctctacaccgacagtg
tcccacaccggctccacaaccataacggtcaatatcgtagacgtggacaatcggccgccg
tggttccaaccctgtacagaatctcagatcggtaacagcacagtgtgcatcagctctggc
tacacagggacggtcaacttaacccaacaagcggtaggtcctttgtccttgatgccaggt
ccggtcagagccaccgatggtgacaaagggataaacgaacctattggttacagattcctt
gaagaaaatgaaatatttgaaatcaaccctgacagtggcgacatcacgatgaagaaaccc
gtcgacgttgcaggtccgatcgttcttatggtcatggcatttcagaagcagaacggtgat
cagtacgccactaacacggtcatcttgagggtggtgtcgggcagtaaacaccctcccaaa
tttgtgaaacccaattacgaagggtttatctcagaggacgcaggtgtggacagtctggtg
ctggagagcaaaacgtccaacagacccctccgagttcaagctacagatgaggactttgct
aatggggtgaatcctgacattagatttgaggtcatcggcgggactgacttcgacattact
cctgaaggtttcatcctcatggtacaggaggtttccataggaagtgtgaatttacaaatg
agggtggttgacacgaccaatgatgaatccagcaccacctctctcacagttgaggtcact
ccagaagacaaccggttgcgtgtaggagggtacagagcggaggatatggccgctgtaggt
gccagtttggctgtggtcatcgttctctgtctggttggcatcggactgctggcgcatcac
gtcaagagccataactcagactggaagaaactttctgaggccagcgtcttcagaagcaac
ctgggtgggggttcaggaggtcctaaggagggtgtgcagtactctaacgagggcttccag
catgatggggatcctggaagcgtgagctccgggcttgccgcagacctggatatgaaactg
gagtccggggcgaggtcttcgccggagcagatgctcaaaaccgcctccgttccacagacg
agagccgcacctgactccagcagcctggccagcgcagatatcgagaaagaggtcaaaccc
atcttgaccaaagagcgaagggcagaggagggctacaaagccgtctggtttaaagaagac
atcgaccccaacactaaagaggaagtggtcatcattcctgacacgggtgaaccggcagat
catgatgaagatgatgatgatgaagatgatgaggaacatatgaaaacagatatggatgaa
gaggctgcgggaagatttactagagattcagactcagaggatgaagaagggttgacgtca
gatttgtag
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