Triplophysa rosa: 130552554
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Entry
130552554 CDS
T09216
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tros
Triplophysa rosa
Pathway
tros03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130552554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tros03009
]
130552554
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
Pre-60S particles
RNases
130552554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
130552554
NCBI-ProteinID:
XP_057186886
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All DBs
Position
LG4:31498478..31505405
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AA seq
728 aa
AA seq
DB search
MKRKAQESVMMSREKKRVRLENISQDVLTVRDLCGLIQYATLRPTHNVMKPSWFCVSGDD
GVSRVNVMILDGLTQTHFYRYFSHFKHLRNKYTARWSLAPSSSDLMSDLLNSDVAQSVGH
VKISAPLMLNPVIRRFGLRASGLSAFVLNEQDMIKHNFPVKGGRGCEGLVCTQSDGPVTD
SSPLFGLDCEMCWTCAGLELTRVALVDGTGQCVLDELVKPHNPIIDYNTRFSGITSLMLN
PVNTRLTDVQCKILQLLPPDGVLVGHSLENDLRALHLIHRHVIDTSLLYRKEFGQRFKLK
HLAEVILKREIQSEERTGHDPCEDALAALHLAQYFISKGPREVVKDHLKDLWEVEFSGDS
DSNTRHSSSSLAFGHALYTSGKSALYLSTRTDDTHSLTNQRLCRRQHCTTNREVVCVFRR
VVQSYTLSVLQFSYSENLQQTAAQRQQHLQQMSVCLREMCVLYVGPWSSDTTEKQIHKLF
RRCGRVRTVRFLHNTHGVHAEVVFDHLEGAQLAVNHLTEHHITDCHIKVRRPVHESCLDL
DERVSERQRDVLNRHTIYVCNLSSKHHHRDDLLQTFKQFGTVQHIFRPAKHAGKRHCRHA
FITFECSESVQAAVGVALQMGNRKLSVCHALTPPHMTSWTHTQAVVTETSAETVEQREGC
DSSHLISPGHVQQLQMEHHIQKLDGKVGKVFGALEKNCMSIVILPGIMSASVDYLGLCFI
HIKRDDTI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaagcacaggagagtgtgatgatgtcacgtgagaagaagagagtcagactg
gagaacatctcacaggatgtgctgacagtgagagatctgtgcggtctgatccagtacgcc
acactcagacccactcacaacgtcatgaagcccagctggttctgcgtcagcggtgatgat
ggagtctctcgggttaatgtcatgattctggacggactcacacagactcacttctacaga
tacttcagtcacttcaaacacctccgcaacaaatacactgctagatggagtctagcgccc
tcctcaagtgacctgatgtctgatctcctcaactctgatgtcgcacaatctgtaggacac
gttaagatctcagctccgctcatgctgaatcccgtcatccgtcggttcggtctgagagct
tcagggctgagcgcttttgtgctgaacgaacaggacatgatcaaacacaacttccctgtg
aagggtgggcggggctgcgaaggtttggtgtgcactcagagcgacgggccggtgactgac
agcagccctctgtttggactggactgtgaaatgtgttggacttgcgctggtctggagtta
actcgggtggctctggtggacggcactggacagtgtgtactcgatgaactagttaaaccg
cacaaccctataatagactacaacaccaggttttctggaatcacgagtttgatgctcaac
cccgtaaacactcgactgacagacgttcagtgtaaaatcctgcagctgttgcctcctgat
ggcgttctggtgggtcactcgctggagaacgacctgcgggccctacacctgatacaccgt
cacgtcatcgacacgtctctgctgtaccgtaaagagttcggtcagaggtttaaactcaaa
cacttagctgaagtgattctcaaaagagagattcagtcagaagagaggacaggtcatgac
ccctgtgaggacgctttggccgctcttcatctggctcaatacttcatcagtaaaggaccc
agagaggttgtgaaggatcatctgaaggatttgtgggaggtggagttctctggtgacagt
gactcaaacactcgtcacagcagcagctccctcgccttcggacacgccctctacacatcc
ggcaaatccgcactctacctgagcacaagaacagatgacacacactcactgaccaatcaa
cgcttgtgcagaagacaacactgcacaactaacagagaggtggtgtgtgtgttcaggcgt
gtggttcagtcttacacactgagtgttcttcagttctcatacagtgaaaatctacaacaa
acagcagcacaaagacaacaacatctacagcagatgagtgtgtgtttgagagagatgtgt
gtgttgtacgtcgggccgtggtccagtgatacaacagagaaacagatacacaaactcttc
agacgctgcggtcgcgtgcggactgtacgattcctgcacaacacacatggggttcacgct
gaggttgtgtttgatcatcttgaaggagctcagctggctgtcaatcatctgacggaacat
cacatcactgactgtcacatcaaggtgcgtcgtccggtacacgagtcgtgtttggatcta
gatgagcgcgtctctgaacgtcagcgtgatgttctgaaccgtcacacgatctatgtgtgt
aatctgtcctctaaacatcatcaccgtgacgacctgctgcagaccttcaaacagttcggc
accgttcaacacatcttcagacctgcaaagcatgctgggaaacgccactgcagacacgcc
ttcatcacgtttgagtgcagtgagagcgttcaggcagcagtgggcgtcgccctgcagatg
ggtaacaggaagttatcggtgtgtcacgctctgaccccgccccacatgacctcatggaca
cacacgcaggccgtggttacagaaaccagcgcggaaacagtggagcagagagagggatgt
gattcgtctcatttgatttctcctggtcacgttcagcagcttcagatggagcatcacata
cagaaactggatggcaaagtgggaaaagtgtttggagcgctggagaagaactgcatgagc
atcgtcatcctgccaggaatcatgagcgcttctgtggattatcttggcttgtgcttcatt
cacatcaaacgtgacgacaccatctag
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