Triplophysa rosa: 130552570
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Entry
130552570 CDS
T09216
Symbol
sorcs3a
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130552570 (sorcs3a)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Others
Others
130552570 (sorcs3a)
Endosome - Lysosome transport
130552570 (sorcs3a)
Endosome - Golgi transport
130552570 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130552570
NCBI-ProteinID:
XP_057186905
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All DBs
Position
LG4:complement(27775250..27962268)
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AA seq
1246 aa
AA seq
DB search
METCPGAFPGSHFTLFTWLILSFLYLFPNVEAEITCAPCMSPMQLSDAGNVYMRNPSDTG
KYSRQDQKKPKLPTVLYPNGVLGGRAAGDFPGLVEKLEKDANAAGLNSRALMENLTESGL
DEEMFSDEYLESESEFEPGEKQNDAARMRIKRSVPEFMESARSGEARSEEQRKSPGLRMD
GPAKRTEVRWNRDDDGKVSDSRPDEPRVVSSTFALAGDSAHNHAVVYWSGKNSSVILILT
KLFDFHLGSVTESTLWRSTDYGSTYERMNDKVGVKTVLRYLYVCPTNKRKIMVLTDPEFE
SSILISSDEGASFQKXRLSFYVLSLLFHPTQEDWALAYSHDQKLYSSFDFGRKWQLVHER
VTPNRFYWSVIGLDKELDLVHMEAHTSEGYCQYVTCRAHACSESSRTYPFPGYIETNSLV
VQDEYIFVQVTTTGRASYYVSYQREPFIRIKIPKYSLPKDMHIVSTDQSQVFTAVQEWNQ
NDTYNLYISDLRGMYFTLALENVRTSRSLGGNSMIDLYEVEGIEGMLIANKKVENQVKTY
ITYNKGRDWRLLQAPATDLAGNPIHCVLPFCSLHLQLQMSENPYLSGTISTKSSAPGVIV
ATGNIGSELSHNNVAVFISSDAGNTWRQIFEEEHNVWFLDKGGALVAVKQPTVPTRHLWM
SFDEGRQWTRHSFSAMPLFVDGILVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSVFTRR
CTEGDYQTWHLHNQGEPCIMGQKQIYMKRRPGNYCMVGWDNSRILSAEPCICRAHDFECD
YGFERRGDGNCLQAFWFNPSTVSRSCSQGQNYLNSTGYRKVVANNCTKGVKDLYTARKQQ
CPNRPPRGLALATGDDKLTANLGSNVTFLVRLEEGDSMRTNIQLDFGDGTAVSYSNLSWT
QEGIRHVYRSAGIFRVTALAENSLGFDTSSLYLHVTCPVEQIQLLAPYVVIKNKEVNLTA
VVWPSHFRTLTYFWWLGNNTEPIITLDSSISYTFSTEGMTTVTVQVSSGESLLQDSRSIA
VQEFFKSLLLSFSPNLDEANPDIPEWRQDVGRVIKKAVLQVATDIPEDQLLVAVFPGIPT
AAELFLLPPRNQSDGRKRSEEDLEQLSQVLVNALNQISVEFELKPGSRVIVYVTQLTLAP
LVDSLPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNHEKEQEMISTVGQN
DATPKITLSEFSTQKEMMEKEMEARAKRAVINTCESTREIPNCTSV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggagacctgtccgggtgcattccctggctcacactttactctttttacctggctaatt
ctatcattcttgtacctttttccgaatgtagaggcagagataacttgcgcaccgtgtatg
tcgccaatgcaactgagtgacgcggggaatgtgtatatgcgaaacccgtctgatactggg
aaatattcgagacaggatcaaaagaaacccaagctgcccacagttctgtacccgaatgga
gtactcggtggacgagcggcaggtgattttcctgggttggtggagaaactggaaaaagac
gcgaacgcagcggggttgaactcccgtgcgcttatggagaacttaaccgagtccggtttg
gatgaagaaatgttttcggacgaatatttggaaagtgaatccgaattcgaaccaggggaa
aagcaaaatgacgccgcgcgtatgagaattaaaagaagcgtgcccgagtttatggagagc
gcacggagcggcgaggcgcgctcggaagagcaaagaaaaagccctggtctgcggatggat
ggacctgcaaaacgcaccgaagttcgctggaacagggatgatgatggcaaagtatcagat
tccagaccagacgaacccagagtggtcagcagcacttttgctctggctggagactccgcg
cacaaccacgcagtcgtgtattggtccggaaaaaacagcagcgtgattctgattctcacc
aaactgttcgactttcacctcggcagtgtaacagaaagcactctatggagatcaacagat
tacgggagcacctatgagagaatgaacgataaagtgggagtcaaaaccgttctgagatac
ctctacgtctgccctaccaacaaaagaaagataatggtgctgaccgatccagagtttgaa
agcagcattctcatcagttcagatgaaggtgcaagcttccagaaataacgcttgagcttt
tatgtcctgagtctgctgttccatcccacacaggaggactgggcactggcctacagtcat
gaccagaagctctatagctcgtttgactttggtcgaaagtggcaacttgttcacgagcga
gtgactcccaaccgtttctactggtcagtaataggactggacaaagaattagatctggtg
cacatggaggcccatacgtctgaaggctattgtcagtatgtgacatgcagagctcacgcc
tgctctgaatccagcaggacgtatccatttcccggatatattgagaccaactcactcgtg
gttcaagatgaatacatattcgtgcaggtgacgaccacaggcagggcgagttactatgtg
tcctatcaaagagaacctttcatacgcattaaaattcctaagtattctttgcccaaggac
atgcatatcgtaagtacggatcagagtcaggtcttcaccgctgtccaggagtggaatcag
aacgacacgtacaacctatacatatccgacttgcgggggatgtacttcactttggccttg
gagaacgtcaggaccagccgcagcctcgggggcaacagcatgatcgacctttacgaggta
gagggaattgagggtatgctcatcgctaataagaaggtggagaaccaggtgaagacgtac
atcacttacaacaagggccgcgactggaggcttttgcaggcgcccgccactgatctggcg
ggaaatccaattcattgtgttttgcccttttgttcgctccatctacaactgcagatgtca
gaaaacccgtacctctccggcaccatatccactaagagctcagcgccgggagtcatagtg
gctacaggaaatattggctccgaactgtcacacaacaatgtagcggtgttcatttcgtca
gatgccggcaacacctggagacagatttttgaggaagaacacaacgtgtggtttttggac
aaaggtggagctttggtagcagttaaacaacccactgttcctacccgacatctttggatg
agctttgatgaaggtcgccagtggacgcgtcacagtttctcagccatgccgctctttgtg
gatggaattctggtggaggcaggtgcagaaaaccaaatcatgacgtttttcggccatttc
agccatcgctcagaatggcagcttatcaaaattgactacaagtctgtgtttaccagaaga
tgcacggagggcgactaccaaacttggcaccttcataaccaaggcgagccgtgcattatg
ggtcagaagcagatctacatgaaacgtcgcccgggcaactactgtatggtgggatgggac
aactcgaggatcttgtcggcagaaccctgcatctgcagagcgcatgactttgagtgcgat
tacggttttgagagaagaggtgatggaaactgtctgcaagcgttttggttcaacccttct
actgtgtctcgaagttgcagccaggggcaaaactacctcaacagcactgggtatcgtaaa
gtggttgcgaacaactgcacaaaaggcgtgaaggacttatacacggccagaaagcagcag
tgcccgaatcgaccgccgcgaggattagccctggcaaccggtgacgacaaactcacggct
aacttgggcagcaatgtgaccttcctggtgcggctggaggagggcgactccatgaggaca
aacattcagctggacttcggagacgggactgcggtgtcctactcgaacctgagctggacg
caggaggggatcagacatgtgtaccgcagcgcaggcatctttagagtgacggcgctggcg
gagaacagcctcgggttcgacacgtcatctctgtacctgcacgtgacatgcccagtggaa
cagattcagctgttggctccatatgtggtcattaagaacaaggaggtgaacctgacagca
gtggtctggccctctcatttcagaacgctcacctatttttggtggctggggaacaacacg
gagccgatcattacgttggacagcagcatttcctacacgttcagcactgagggtatgacc
acagtcaccgtgcaggtgtcatcgggagagtccttactacaagacagcaggagcatcgca
gtgcaagaattcttcaaatcgcttcttttatctttctctcctaatctggacgaggccaac
cccgacatccctgaatggagacaggatgttggtcgggtaattaagaaggccgttctccaa
gttgcgacagacattcccgaagaccagctgctggtcgccgtgtttcccggaattcctacc
gccgccgagctcttcctgcttcctcccaggaaccaatcagatggcaggaaaagaagcgag
gaggatctggagcagctatcacaagtcctggtcaatgcattgaatcagatctcggtggag
ttcgagttgaagcccggctctcgggtcatcgtttacgtcacacaactaactttagctcct
ctggttgactccctcccgagacacagcagttctgcgatgctgatgcttctgtctgtcgtc
ttcttgggtctagctgtatttctcatctacaaatttaagaggaaaatcccctggattaac
atctacgcggaggtgaaccacgagaaagagcaggagatgatcagtacggtgggccaaaat
gatgccacgcccaaaatcaccctgagcgagttctccacccagaaagagatgatggagaaa
gagatggaggcacgcgccaaacgagccgtgatcaacacctgtgaaagcacaagggagatt
ccgaactgcacgagcgtctga
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