Triplophysa rosa: 130552577
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Entry
130552577 CDS
T09216
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tros
Triplophysa rosa
Pathway
tros04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130552577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130552577
Membrane trafficking [BR:
tros04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130552577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_EML_2
Complex1_30kDa
Motif
Other DBs
NCBI-GeneID:
130552577
NCBI-ProteinID:
XP_057186912
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Position
LG4:15453628..15747018
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AA seq
1036 aa
AA seq
DB search
MSLRCVRLENHIGLGPERPEDEDEPFILEDTCLVNTENIDAHSCETSSLASSDSGDRTHF
KRRRKAVETNATQHGFVLRHSVLKGISAQIVSAADKVDSGLPTAITISSVIAVGTSHGLA
LVFDQNQALRLCLGTTALGADYGAVSALSINHDCTRLLCGFAKGQITMWDLANGKLLRTI
TDAHPPGTAILHVKFTDLPTLAVCNDSGGSVFELSFRRVMGMRTCESRCLFSGSKGEVCC
VEPLHAGPELKDHPVTQYSLLALASLTKILLLGLRPSLKVWMTFPYGKMQVDPTSVPLLA
WQFVAVQKTINPILSFCRGDTIHFLLVKKDESGTIHVIKQRQFQLNCDPISLSWINSHTL
VLMDSREKLRVLDRPSQEELEVVDMTELQLVYNSSYFKSLATGGNVSQALALVGERACFQ
SVSSYAGQIIYLGTKSVHIMTLRNWRERVDHLLKQEKCIEALSLAWSFHEGTAKAVLGLY
DDPAKRKCVVADKMVEILLQYVNHSLKKCPEQGKIQVMEHHFQDMVPVMVDYCILLQRTD
LLFNEIYPRLVENSVARGVFLESLEPYILNERIGCLTAPVMRDLLSYFQENGMIESVEGC
LVHMDITNLDIKQVVKMCWDNQLYDAMIYVFNSGINDYVSPMEKLFQAICPPLHEGKPLT
DEHVVIGNKLLVYISCCLAGRAYPLGDISEDLVPQVKNQVFEFLIRLHSVEAAQEEEVYP
FIRTLLHFDTQEFLNVLALTFEDFKNDKKALEYQQRIVDILLKVMLDNSDFTPSQVGCLF
TFLARQLAKPDNTLFVNRKLFDQVLEFLCSPDYDSRHTERQQVLLELMQIGGVVQFEEGH
LLDLAEKAEFYQVCEFMYDRKHHYDRVVDCYLKDSLRKEELFNYIHTFLSMSDYTLDEKQ
SVRVKALQHIKDLVNINPVKTTALIAVHFSDKVHSIVTDLQDDDYLVFQFLMCLLDPSSR
EGLNPQAVMKVGPHLNELLVDLLCQFSPQQVITFLKMSRDYRLEETIQRKTEKMPKPIAP
IYCMTARQTIQKLQVS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcgctgcgtgcgcttggaaaaccacatcggtttaggaccggaaaggcctgag
gatgaggatgagccattcattctggaggatacatgtcttgttaacacagagaatattgat
gcccactcgtgtgagacctcctctctggcaagctctgacagtggagaccgcactcatttt
aaaaggaggaggaaagcagtggaaactaatgcaacacaacatggatttgttttaagacac
agtgtattgaaaggaatctcagcccagatagtgtctgctgcagataaagttgattctggc
ctgccaacagcaatcactatttccagtgtgattgcagtaggcacatcacatggtctggcc
ttagtattcgatcagaatcaggccctgcggttatgtttgggtaccacagcacttggagca
gattatggtgcagtctcagctctcagtattaatcatgactgtacaagacttctgtgtggc
tttgctaaaggacagatcactatgtgggatttggccaatggaaagcttctgcgcactatt
acagatgcccacccacctggtactgccatactacatgtgaagttcacagacctcccaacg
cttgctgtgtgtaatgacagtggtggatcagtgtttgaactgtcattcaggagggtgatg
ggaatgaggacatgtgaatcaaggtgtttattcagtggttctaaaggtgaagtttgctgt
gttgagcctcttcatgctggacctgaactgaaggatcatccagtcacacagtattctcta
ctggctttggcttcactcactaagatcctgctgttaggactaaggccttcacttaaagtc
tggatgacttttccctatggcaagatgcaggtggatcctaccagtgtccccttgttagct
tggcagtttgttgcagtacagaaaacaatcaaccccattctgtctttctgtagaggagac
accatccactttctgctggttaaaaaagatgagtctgggactatccatgtcatcaaacag
aggcagtttcaactcaactgtgatcctattagtttaagctggataaattcccatacactt
gtattaatggacagcagagaaaagctgcgagtactggacaggccgagtcaggaggaactg
gaggtggtggacatgactgagctgcaactggtctataacagcagctatttcaaatccctt
gctactggtggaaatgtcagccaagcactggccctggttggagagagagcatgtttccag
tctgttagcagctatgcaggccagattatttatctgggaacaaagtctgtgcacatcatg
accttgaggaactggcgtgagcgtgtagaccatctgctgaagcaggagaaatgcattgag
gctctttcacttgcctggtctttccatgagggtactgctaaagctgtgcttggtctgtat
gacgaccctgctaaaagaaaatgtgtagttgcagacaagatggtggagattttattacag
tatgtaaatcattctctgaaaaagtgtccagagcaggggaagattcaggtgatggagcat
cacttccaggacatggttccagtcatggtggattactgtatacttttgcagagaacggac
ctgctgtttaacgaaatttaccctcggctggtggagaactctgttgccaggggtgtgttt
ttggagagtctggagccatacattttaaatgagaggattggctgtctcaccgcacctgtc
atgagagatcttctcagctatttccaggaaaatggcatgatagagagtgtggagggatgc
cttgtccacatggacatcaccaacctggatataaaacaggtagtgaagatgtgctgggat
aaccagctgtatgatgccatgatctatgtgttcaacagtggcataaatgactatgtcagt
cccatggagaaactcttccaggcaatttgtcctcctctgcatgaaggaaagcctctcaca
gatgagcatgttgtaataggaaataaactgctggtatacatcagctgctgtctagcagga
cgagcctatcctttaggggacatttctgaagatcttgtaccccaggtgaaaaaccaggtg
tttgaatttctgatccgtttgcattctgtggaggctgcacaggaagaggaagtgtatcca
ttcatccgaactctcctccattttgacactcaagagttcctaaacgtcttggcactgaca
tttgaagacttcaagaatgacaaaaaggctttggagtatcagcaacggattgttgacatt
ttgctgaaggtcatgttggacaattctgacttcaccccatcgcaggttggctgtcttttc
actttcctggcacgccagcttgccaagcctgataacaccctctttgttaaccgaaagctg
tttgaccaggttcttgagtttttgtgtagtccggattatgactctagacatacagaaaga
cagcaggtacttctggaactgatgcagattgggggtgtggttcagtttgaagaggggcat
ctccttgaccttgcagaaaaggcagagttttaccaagtctgtgagtttatgtatgacaga
aaacaccattatgacagagttgtagactgctaccttaaagactctttaagaaaggaagag
ctctttaactacatacataccttcctatctatgtcggactacaccttagatgagaaacag
tctgtgcgggtcaaagcactacaacacatcaaggatctggtcaacatcaacccagttaag
acaacagcgctaatagcggtacacttttcagacaaagtgcactctattgttacagatctg
caggatgatgactacttggttttccagtttctgatgtgcctcctggaccccagctccaga
gagggtctgaatcctcaggctgtgatgaaagttggaccacatcttaatgagcttttagtg
gacctgctgtgtcagttcagccctcagcaagtcatcaccttccttaaaatgtctcgggat
taccggctagaggagaccatacagagaaaaacagaaaagatgccaaagcccatcgcgccg
atttattgcatgactgcgagacaaaccattcagaaacttcaggtgagttaa
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