Triplophysa rosa: 130552625
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Entry
130552625 CDS
T09216
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130552625 (zc3h13)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130552625 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
130552625
NCBI-ProteinID:
XP_057187002
LinkDB
All DBs
Position
LG4:complement(14668254..14796193)
Genome browser
AA seq
1707 aa
AA seq
DB search
MINSEPCRMSKIRRKVTVENSKTISDSSNSTTTPSRRPSVFERLGPSTASNAAETHCRNW
LKTGNCSYGNACRYTHGTPSEGKGFSGAFHRSAERPTGDLRERMKNKRQDVDGDAQKRDT
DEPTSPTTRQGDSSRRRHREKEDIKITKEHTPASEEETASWEASREDSDNGDYDYELSLE
MKRQKIQRELMKLEQENMDKREEVIIKKETSPEHTSSKGSPSSRKSSGSPKHRAAGKGGT
SSKKEKSSTLVISSPVSDQTRTAESDSRSSKSSHNKRKGPQTPSPPPPVPAETLVIVKKH
KNKHKNKEKSEDKFKDVKERGCEIEKHKEKKEKRRDRSDSFRKAKCAVTSEDLSESIPLP
SREASPTAKRRSSSPKLTSQKQALQQRSRTPPCHRRSPSPHSRQQHSPSSHSGSSTHRHS
PSPRHRCDSVSPLYHRDIPNSSSFSPPPIQSSQRSHSPRITHRDPSASPAPRRSSSHQRT
QARERGRVDRDKSPVQLERRHERRDECPGKREKDSSRDERDYDIELISSRDTRDSRDHRG
ERDRRDARDERQPRGEFKDSRDAHATETRNRSGRESQQHRDKERDRERERERERNEAPRK
EDTTAQDERNYGRGHGKEEVKNVSRADNKNESRAERTGRGRGRGADAQDHKGYARGNKAS
QADTSSTCERDSWESRGSFRERSSERSSNRDRYDHDRQRGEQAREDRKVGHTEREHRDNR
EREQRAPSSGRVEDLEREERRDDRRNDRGEERIRDREKEKDREKEREREREKDREREADK
ERERAREREREREEKERGREREERERERERERKEREREREQRERERQREWEERERGREER
RDRRDESRDDRSGRDTQEERKNTRKRHRTETTPSPRPSPKRARDVSPADSEGYNSTEEKG
DKHRLLSQVVRPQDTPHSPVHLFTDEKRTRWKDEDHCGDKHDSRGRHEEVDYHSERARRL
PERRGDQAPDGSANTSVCDSRRAKEQRELPVAALIPSALVEDRNPFSAIHEEGKKKPKCQ
RKNLKKSHKEEDGPTGGEERCNLEAPSCSTVAKAHQHLSPRKTPKKKGLDRKRKRSGGVE
SDISDDELVTQHPVIKRRHGPHTPPSIKKDDLASQRAVAAGQGSHTAKIDASFSDWSDED
VPERGETSAAQLSERPQERMLSSERPHGRCTRGGGRDHTDPPIAPLLPDPPMLIQSLPLQ
PLLPQHMLRKPQQADKQQHSSMGSNQNRASSRRLRSSSNESAQRDEAQQGPRSRRGRMLG
ASSHDRDRDREREREKEKDRERAVASEYAGGERKSRIDKLRRGEPSRSTSSDRQDSRSQS
SRRSSPESERQARSRAGSYESRERDRDRDQLDRERERNRQMQNQQPQQREWESEPRDWGG
RALRGNREAVRERDMRERERLLPEGPLAHDKIDRNRGERERERERILQFNLQTHREPKSR
AEVKIERVEYEPLLPREALIDVEKPVNISNLQGEATQPEKMDDLEEEDAKGDDGHSVSGG
EEYEPISDDELDEILADSQKRDEQLDDEKISGPVDVIDVDWSSLIPRQQQESRAPGAALF
RFTPGAVLLKAGVSRSLAGPQLLGKVKEVCSRELKDPKDTDKMLEHDMGALNMAAYSRRM
ERANLLRSLSHCCKALCARRDVAIRKHLLKNERGTTKQIYTSAPVVDNELMTLCLRLFKK
KISSTLSSGQKSDLGSASQQLSTPAEV
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacagcgagccctgcagaatgtccaagatcaggcggaaagttacagtggaaaat
tcaaagaccatatcagacagtagcaacagcacgaccaccccttcccgtaggcccagtgtg
tttgagagactcggccccagcacagccagtaatgctgcagagactcattgtagaaactgg
ttaaagactggaaactgcagttacggcaacgcatgtcggtacacacatggaactccgtca
gaaggaaaaggcttctctggagctttccacaggtcagccgagagacccactggggatctc
cgagagaggatgaagaataaaagacaagatgtagatggtgatgcgcaaaaaagagacaca
gacgagcccacttcgcccacaaccagacagggagattcatcccgacgaagacacagagag
aaagaggatatcaaaatcacaaaggagcacacaccagctagtgaagaggaaaccgcaagc
tgggaagccagtcgtgaagattctgataacggtgattacgattacgagttatcgctggag
atgaagagacagaaaattcagcgtgagctgatgaagctggagcaggagaacatggacaaa
cgagaggaggtcatcatcaagaaagagacctctcctgagcacaccagttctaaggggtca
ccctcatcccgcaagtctagcggctcacccaaacatagagctgctgggaagggtgggacc
tcaagcaagaaagagaagtcctccactttggtcatttcttcaccagtgtctgaccagaca
aggacagcagagtcggacagcagatcatctaagagtagtcataacaaacgtaaggggccg
cagactccaagtcctcctccccctgtccctgcggagaccctggtgattgtgaagaaacac
aaaaataaacacaaaaacaaggagaaatctgaggacaagtttaaagacgtgaaagaaaga
ggatgtgaaatagaaaaacacaaggagaaaaaagaaaagcgcagggatcggtcagatagt
ttccgcaaagccaaatgtgcagtaacatcagaggacctttctgaaagcattcctctacct
tccagggaagcatcacccacagccaaaagaaggtcatcctcccccaaactcacttctcaa
aaacaagctttacaacagaggagtagaactccaccatgtcaccgccgcagcccctcccct
cattccagacaacaacactccccctcttcacactctggctcctccacccatagacactcc
ccctcccctcgccacagatgtgattctgtctctcccctgtaccatcgagacattcctaat
tcctcgtcattctcaccacctcctatccagtcctcgcagcgctcccattctccacgcatc
actcacagagatccctctgcaagccctgcccctcgcaggtccagctcccatcaacgaaca
caggccagagagaggggtagggtagacagagacaagagtcctgtacagctggagaggcgc
catgagcgcagagatgaatgtcctgggaagcgtgagaaggacagcagtcgtgatgagcga
gactacgacattgaactgatttcttcacgcgataccagagacagtcgagaccaccgtgga
gaacgagatagacgggatgcccgggacgagcgacagccccgtggagagtttaaagacagt
agggatgcccatgcaacagaaacgcgaaaccgctctggaagagaatcccagcagcacaga
gacaaagaacgtgacagggaaagggagagggagcgagaaagaaatgaagctcctagaaaa
gaggatacaacagcccaagatgaaaggaattatggaagaggccatggaaaggaggaagta
aaaaatgtgagcagagcggataacaaaaatgaatctcgagctgaaagaacagggagaggg
aggggacgtggagcagatgctcaggaccacaaagggtatgctcgtggtaacaaagcatca
caggctgacactagcagtacttgtgagcgtgacagctgggagtcccggggcagtttcaga
gagaggagttctgaaaggagcagtaatcgtgatcgttatgaccatgatagacagagagga
gaacaagccagagaagacaggaaggttggacatacagagagagaacaccgtgacaacaga
gaaagagagcaaagggcaccttcttctggccgtgttgaggaccttgagcgtgaagaaaga
agagatgatcgaaggaatgatcgaggggaggagcgcattcgtgacagggagaaggagaag
gatagagagaaagagagggaaagggagagagagaaagatagagaaagagaggctgacaaa
gaacgtgagcgagccagggaaagggaacgggaaagggaggaaaaagaaaggggacgtgag
agggaggagcgagagcgagagagggaacgagagagaaaggaaagggagcgcgagagggag
cagagagaaagggaaaggcagagggagtgggaagaaagagaaagaggaagagaagagaga
agagatagaagggatgagtctcgagacgatcgctctggccgagacactcaagaagagagg
aagaacacccgtaagagacatcgtacagagaccactcccagtccacggccatctcctaaa
agagcgcgtgacgtcagccctgcagacagtgaaggttacaacagcactgaagaaaaagga
gataagcaccgactgctaagtcaggttgttcgtcctcaggataccccccattcccctgtc
cacttgtttactgatgaaaaacgcactcgctggaaggatgaagaccactgtggtgataaa
cacgatagccgcggccgacacgaggaggtggattaccacagtgagagagcaaggagatta
ccagagcgtcgtggagatcaagctccagatggttctgctaacacaagcgtctgtgactct
aggagggcaaaagagcagagagaactacccgttgctgctctgattccctctgcattagtg
gaggaccgaaaccctttttctgctattcatgaggagggcaagaaaaagcctaaatgtcag
aggaaaaatctgaaaaagagccataaagaggaggatgggccaactggtggagaggaacgt
tgtaaccttgaggccccatcctgctccactgtggccaaggcccatcagcatctttcccca
cgcaagacacccaagaagaaaggtttagataggaagcgtaaacgctcaggtggtgtcgag
tcggatatttctgatgatgagctagtaacccagcaccctgtcattaagagacgacatggt
ccacatacacccccatcaatcaagaaggacgaccttgcatcccaaagggccgtagctgct
ggacagggttctcacacagctaaaatcgatgctagcttcagtgactggtctgacgaggat
gtaccagagcgaggcgagacctctgctgctcagctgtctgagcggccccaagagcgaatg
ctgtcgtctgagaggccccacgggcggtgtacacgtggtggcggcagggaccatacagac
ccccccattgcccctctgctccctgatcctccaatgttgatacagtctcttcctttacag
ccattattgccgcaacacatgctacgcaaaccacagcaggcagacaaacagcagcacagt
agtatgggcagcaaccaaaaccgggcctcatcgagaagactgcgctcatcctctaatgag
tcggctcaacgtgatgaggcccagcagggaccgaggtctcgaagaggacgcatgctgggt
gccagctcacatgatcgggacagagaccgagagagggaacgagaaaaggaaaaagacaga
gagagagcagttgccagtgaatacgcaggaggagaaagaaaatcgagaattgataagctg
cgaagaggagaacccagccggagtacatcgtcagaccgacaggactcccgaagtcaaagt
tctcgtcgcagttcaccagagtctgaacgtcaggctcgctcaagagccggatcctatgaa
agtcgggaacgtgaccgagatcgtgatcagttggaccgggagcgtgagagaaatcggcaa
atgcaaaatcagcaaccccaacaacgggagtgggaatcagaacctcgtgattggggtggc
cgggcactccgtggcaaccgggaggcagttagagagcgggacatgagggaaagggagcgg
cttttacctgaaggacctctggcacatgacaagatcgatcgaaaccgtggtgaaagagag
agagaacgggaaaggattctccaatttaaccttcaaactcacagggaaccaaagagcaga
gctgaggtaaagattgagcgagtagagtatgagccactattgccaagagaagcccttata
gatgtagaaaagcctgttaatatctcaaacctgcaaggggaagcaactcagcctgagaaa
atggatgaccttgaagaggaggatgcaaagggggatgatggacactctgtgtcaggtggt
gaggaatatgagccaataagtgatgatgaacttgacgagattctggcagacagtcaaaag
cgggacgaacagctagatgatgaaaagatttctgggcccgtggatgtgattgatgtagat
tggtccagtttgatacccaggcaacaacaggagtccagagctcctggggcagcactgttc
agattcacaccaggggctgtgctgctcaaagcaggagtgtccagaagtttggctgggcct
caacttctgggcaaggttaaagaggtctgctctagagagctgaaagatcctaaagatact
gataaaatgttagagcatgatatgggagctctaaacatggctgcatacagcagaagaatg
gaaagggccaacctgctaaggagtttaagccattgctgcaaggcactgtgtgctcgccgg
gatgttgccatacgcaaacatttgctgaaaaatgaaaggggcacaaccaagcagatctac
accagtgctccagttgttgacaatgaattaatgacactgtgtttgcggctttttaaaaag
aaaatttcttccaccctgtccagtggtcagaagtctgatttaggttctgcatcccaacag
ctcagcacaccggcagaggtgtga
DBGET
integrated database retrieval system
