Triplophysa rosa: 130552670
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Entry
130552670 CDS
T09216
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130552670 (lrp4)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130552670 (lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
DUF5050
EGF_LRP2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
130552670
NCBI-ProteinID:
XP_057187146
LinkDB
All DBs
Position
LG1:complement(38462690..38547114)
Genome browser
AA seq
1915 aa
AA seq
DB search
MRHIAVVYGSLLTLTLLADGVLSAAECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDCG
DHSDEDGCILPTCSPLDFHCDNGKCIRRSWLCDGDNDCEDDSDEQDCPPRECEEDEFHCQ
NGYCIRSLWHCDGDNDCGDNSDEQCDKRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGTD
EENCPTDVMAATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSAEFMC
SSGMCINAGWRCDGEYDCDDQSDEKNCSTSMCMADQFRCVSGRCVRLSWRCDGEDDCSDG
SDEDGCEKTETPPCAADQFLCANGRCIGQRKVCNDVSDCEDGSDEHPFQDCRSRSSEENC
NVNNGGCSQKCLMSRGLVQCTCHTGYTLAQDGRTCRDVDECADEGYCSQGCTNTEGGFLC
WCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFLYS
REVVFWSDVTLDRIMRASLNGSNVEEVVSTGLESPGGLAIDWIQDKLYWTDSGTSRIEVS
NLDGTQRKVLLWQNMEKPRAIALHPIEGKIYWTDWGNMPRIEYSNMDGSGRKIIADTHLF
WPNGLTIDYASHRMYWVDAKHHVIERADLDGKNRKAVISQGLPHPFAITVFEDNLYWTDW
HTKSINSANKFTGKNQEVIRNKLHFPMDIHTLHPQRQPAGGRNPCGNNNGGCSHLCLPSN
KTFTCMCPTGYKKVDQYNCAESLDKFLLFARRTDIRRISFDTEDKLDDVIPLADVRNAVA
LDWDSSERCVYWTDVTTDSINRAKWDGSKQEVVVDTSLESPAGLAIDWLTRKLYWTDAGT
DRIEVSNTDGSMRTVLVWENLDRPRDIVVDPIGGFMYWTDWGANPKIERAGMDASERTVI
ISTNLTWPNGLAIDYQTQRLYWADASVKTIEFGNFDGSGRQVLIGSQLLHPFGLTLHEDR
IYWTDWQSKSIQSADKLTGLDRKTLAENLENLMDIHMFHNHRRKIQTACSVNNGGCSHLC
LLSPAPKGSSCACPTGINLQADGKTCTHGMNSFLIFARRTDVRMISLDIPYFADVVLAVN
SSMKNTIAIGVDAVEGKVYWSDSTLKKISRSNVNGTQQEEVVSTGLLTTDGLAVDSVGRK
IYWTDTGTNRIEVANLNGSMRKVLVWQNLDSPRAIALYHEMGYMYWSDWGEHAKLERSAM
DGSERVVLINNNLGWPNGLAIDRASSQLLWADAHTERIEASDLNGLNRRTLVSPVQHPYG
LTLLGAHMYWTDWQSRSIHRADKDTGGNSITVRSNLPGLMDIQAVDRARPLGFNKCGRRN
GGCTHLCLPRHNGTSCACPTGILLKSDGRSCDPLPETYLLFSNRVSVRRISLDTSDHTDV
HVPVPELHNVISLDYDSVEGKLYYTDVSLDVIRRVNLDGTSMETVIGQGLKTTDGLAVDW
VARNMYWTDTGRNTIEVAHLDGSSRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKIE
RAHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQVLVNPVS
HPFALTQFKPVFSPLTPFSRISQQDRWIYWTDWQTKSIQRVDKHTGRSKETVLANVEGLM
DIIVVSPQRQTGTNYCAVNNGGCTHLCLARTNSFVCACPDEPDGRPCSTISGYVPISPEK
GTAGTQAPNRPKDHTGKPQSGSSAINCTDSNRRGCIQNNVVSAPRDDGPHISYVIGGALT
VLAILILITAFIIYRHKKLKFADPGVSNLTYSNPSYRTSTQEVKIETNAQKPCINNQLRY
KKEVQGVVDGGYTKEKIRIVEGVCLLSGEDLYWEDLRQLKACRGAGLHACMRTDTVSLQA
SSASLDDGETEQLLQGDQSECSSLSTAHTVTPQRHGAHPDTGWVPNRKASTESEV
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgaggcacattgcagttgtttatggcagtcttttaactttaacgcttctcgctgacggt
gtgttaagtgctgcagaatgctcatgtggaaggaatcacttcacgtgtgcggtcagcgcg
tttggagagtgcacgtgtatccctgcgcagtggcagtgcgacggcgacaatgactgcggt
gatcacagcgacgaggacggctgcatactgcccacctgctcgccgctggactttcactgt
gataatgggaaatgtattcgacgctcgtggttgtgtgacggagacaacgactgtgaggat
gactcggatgaacaggactgtccgccgcgggaatgcgaggaagatgaatttcactgtcag
aatggatactgtatccgcagtctctggcactgtgacggagataatgactgcggtgataac
agtgatgaacagtgcgataagaggaaatgttcagataaagagtttcgctgtacggacggc
agctgtatagcagaacactggtactgtgacggagacacggactgcaaagacggaaccgac
gaagagaactgcccgactgacgtgatggcagccacatgcagtgttgaagagtttcagtgc
gcatacggtcgctgcattctggacatctaccactgcgatggagatgatgactgtggagac
tggtctgatgaatctgactgctcttcccaccagccgtgccgttcggccgagttcatgtgc
agcagtgggatgtgtataaacgccggctggaggtgtgacggagaatacgactgcgacgac
cagtcagacgagaagaactgcagtacatcgatgtgcatggccgatcagtttcgctgtgtg
tcaggtcgatgcgtgcggttgtcatggcgctgtgatggagaggacgattgctctgatggc
agtgatgaggatggctgtgaaaagacggaaactcctccgtgcgcggcggatcagttcttg
tgcgccaacgggcgctgtatcggtcagaggaaggtctgtaatgatgtcagcgactgcgag
gatggatccgatgaacatcccttccaggactgccgttccaggtctagtgaggaaaactgt
aacgtgaacaatgggggatgttctcagaagtgtcttatgtcaagaggtttggttcagtgc
acgtgtcatacgggctacacgcttgcacaggacggcaggacatgccgagacgtggatgaa
tgtgcagatgaaggttactgcagtcagggctgcacaaacactgaaggaggttttctgtgc
tggtgtgtgcaaggatatgaactgcgaccggataaacgcagctgtaaagctctgggccca
gaaccagttttgctattcgcgaatcggatcgatatccgtcaggttctgccgcaccgctcg
gaatacacgctgttactgaataatttggagaatgccatcgcgttagactttctttatagc
agagaggtggtgttctggtcggatgtgacgctggaccggatcatgagagccagtctcaat
ggcagtaacgtggaggaggtcgtgtccacgggtcttgagagcccaggtggtctggccatc
gactggattcaagataaactgtactggaccgactcgggcacgtctcgtatcgaagtgtcc
aacctggacggcacacagcgtaaagtgcttttgtggcagaacatggagaaaccgagagca
attgctctgcaccctatcgaaggtaagatttactggacggactgggggaacatgccacgc
atcgaatattccaacatggacggttctggtcgcaaaataatagccgacacgcacctgttc
tggcccaacggactcaccatagactacgccagtcaccgcatgtactgggtggatgccaaa
catcacgtgattgaacgggctgatctggacgggaagaacagaaaagccgtcattagtcaa
ggtctccctcatccgtttgccatcacggtgtttgaggataatctgtactggacagactgg
cacaccaagagcatcaacagcgcaaacaagtttactggcaagaaccaggaggtgatccga
aacaaactgcatttccccatggacatccacacgcttcacccgcagagacagcctgcaggt
ggaagaaatccttgtggaaacaataacgggggctgtagtcacctgtgtctgcccagtaat
aagactttcacctgtatgtgtcccaccggctataagaaggtcgaccagtacaactgcgct
gagagtcttgacaagttcctgctttttgcccgaaggacggacatccgacgaatcagcttc
gacaccgaagacaagctggacgatgtcatacctctggctgacgtcaggaacgccgtggct
ctggactgggactccagcgagcgatgcgtttactggactgacgtcaccaccgactccatc
aatcgagccaaatgggacggaagcaaacaggaggttgtggtggacaccagtttggaaagt
cccgctggtcttgctatagattggctgacacgcaaactctactggaccgatgcaggcaca
gatcgcattgaagtttccaacacggatggaagcatgcgcaccgttctcgtctgggagaac
cttgaccgtccccgagacatcgttgttgatccgatcggaggattcatgtactggacagac
tggggtgcgaatccaaagatcgagcgtgcgggtatggacgcgtccgagcgtacggttatc
atctccactaacctgacgtggccgaacgggttagcgatcgactaccaaacacagagactc
tactgggctgatgccagtgtcaaaaccattgagtttggcaactttgacggatcaggcaga
caggtgttgattggcagccagctgctgcatccgtttggactgactctccatgaagacaga
atttactggaccgactggcagtccaaaagcatccagagcgcagacaaactcacgggttta
gaccgcaaaacactcgctgagaacctggagaacctcatggacattcacatgttccacaac
cacagaaggaaaattcagacggcgtgttcggtgaataacggaggctgcagtcatctgtgt
ctgctgtcgcctgcccctaaaggctcgagctgtgcgtgtcccaccggcatcaaccttcag
gcggacggcaagacctgcactcacggaatgaacagtttcctcatcttcgcccggcggaca
gatgtcagaatgatttctctggacatcccgtatttcgctgatgtcgtcctggcagtcaac
tcatccatgaagaacactattgcgatcggtgtggatgctgtagaaggtaaagtgtattgg
tcagacagcacattaaagaagatcagcagaagcaatgtcaacggcacacaacaagaggaa
gtcgtctcaaccggtctgttgaccactgacggtctggctgtagattcagtgggcaggaaa
atctactggacggacaccggaacaaaccgcatcgaggtggccaatctcaacggctctatg
agaaaagtgctggtgtggcagaacctggacagccctcgtgctatcgccctgtaccacgag
atggggtacatgtactggagtgactggggtgaacatgccaagttggagcgttctgctatg
gacggatcggagcgcgtggttctgatcaataataatctgggctggccgaatggactggct
atagaccgagcgtcatctcagctgctgtgggcggatgctcatactgagaggatcgaagcg
tcggatctgaatgggttaaaccgcaggacgctggtgtctcctgtgcagcatccgtacgga
ctgacgctgctgggagctcacatgtactggacggactggcagagcagaagtatacacaga
gcagataaagacacgggaggaaacagcatcaccgtccgctcaaacctgcccggactcatg
gacatacaggccgtggaccgcgccagacccttgggttttaacaaatgtgggcggagaaac
ggcggctgcactcacctgtgtctgcctcgtcataacgggacgtcctgcgcctgtcccacc
ggtatcctgctgaagagcgacggcaggtcatgtgaccctctgccggaaacgtacctgctg
ttctcaaaccgcgtcagcgttcgcagaatctctttggacaccagcgaccacacagacgtg
cacgtccctgtgcccgagttacataacgtcatatctctggactacgacagcgtggagggg
aagctgtactatacggatgtgtcgctggatgtcatcagacgggtgaatttagacggcacc
agcatggagacggtgatcggtcagggtctgaagaccaccgatggactcgctgtggactgg
gtggcccgtaacatgtactggacggatactggacgtaacaccatcgaagtggctcacttg
gatggttcgtcacggaaggttctggtgaacaacagtctggacgaaccgcgagcgattgct
gtgttccctagcaagggattcttgttctggacggattggggtcacattgcgaagatcgag
cgagcgcatctggacggttctgacaggaaggttctcattaacactgatctgggttggccg
aacggcctgacgctggactatgacacacgcaggatcttctgggtggacgctcacctggac
cgcatcgaaagctctgacttgaatggcaaactgcgccaggttctggtcaaccctgtctcg
cacccgttcgctctcacgcagttcaaaccggtcttctctccattaactcctttttcccga
atctcacagcaagaccgctggatttactggacggactggcagaccaagtcgattcagcgt
gtagataagcacacagggcgtagtaaagagaccgtgctggctaatgtagagggtctcatg
gacatcatagtggtgtcgccgcagcggcagacgggtacaaactattgtgctgtgaataac
ggcggctgcacacatctgtgtctggcgaggactaacagcttcgtgtgcgcgtgtccggat
gaacccgacggccggccgtgttccaccatctctggttatgttcccatctcacctgagaaa
ggcacggcaggtactcaagcccctaacagacccaaagaccacacagggaaacctcaatcg
ggctcttcagcgataaattgcacagactctaatcgccgcggctgtattcagaacaatgtt
gtgtctgcaccacgcgatgacgggcctcatatcagttatgtgatcggtggagctctgacg
gtcctggccattctgatactgatcacagcgtttattatttacaggcacaaaaagttaaag
tttgcagatccaggagtgagtaacctgacgtacagcaacccgtcatacaggacctcgaca
caggaggtgaaaatagagaccaatgcccagaaaccctgcataaacaaccagctgcgatat
aaaaaagaggtccagggtgtcgtggacggaggttacactaaagagaagatccgtatcgtg
gagggggtgtgtctgctctcaggagaagatctttactgggaagatctcagacagctgaag
gcgtgtcgaggggcggggcttcacgcctgcatgcgcacggacaccgtgtctctccaggcg
agctccgcctctctggacgacggcgagaccgagcaactcttgcagggcgaccaatcggag
tgctcgagtctcagcaccgcccacaccgtgacgcctcaacgacacggtgcacatcccgac
actggctgggtccccaaccgcaaagcctccacggagagcgaagtgtga
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