Triplophysa rosa: 130552696 Help Entry 130552696         CDS       T09216                                  Symbol htt Name (RefSeq) huntingtin isoform X1   KO K04533   huntingtin Organism tros  Triplophysa rosa Brite KEGG Orthology (KO) [BR:tros00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tros03019]     130552696 (htt)    04131 Membrane trafficking [BR:tros04131]     130552696 (htt)    03029 Mitochondrial biogenesis [BR:tros03029]     130552696 (htt) Messenger RNA biogenesis [BR:tros03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      130552696 (htt) Membrane trafficking [BR:tros04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     130552696 (htt) Mitochondrial biogenesis [BR:tros03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     130552696 (htt) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_EF3_N HEAT_2 HEAT_GCN1 Vac14_Fab1_bd HEAT_ECM29 Rad26-like_helical_rpts T4_CASP Motif Other DBs NCBI-GeneID:  130552696 NCBI-ProteinID:  XP_057187144 LinkDB All DBs Position LG4:complement(23611094..23652922) Genome browser AA seq 3123 aa AA seqDB search MATMEKLMKAFESLKSFQQQQGPLSAEEIVQKQKKDLATTKKDRVTHCLTICENIVAQSL RTSPEFQKLLGIAMEMFLLCSDDKESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK KNAASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRITKRQEETVQETLSSSIPKI MSALGHFANDGEIKMLLKAFVANLKSSSPTIRRTAASSAVSVCQHSRRKHYFYTWLLNVL LGLVVPVDEEHSTHLILGVLLTLRYLMPLLQQQTPNTSLKGSFGLVRKEADVSPSPEQLI QVYELTLHYTQHWDHNVVTASLELLQQVFRTPPPELLKVLITAGEITHTTVFREEMESRA RSGSILELIAGGSTCSPLLLRKQKGKLLSGEEEGLEDDPERAEVTTGSFSASVGGDNSSE APSSSGISSLGTSDIITEQPRSSQHALQPGDSVDLSTSEQGVGPDSPDVEDEDMLSRSSS GGAGVASTSGDLISDSNQMSTGGISSSPPSDSSQTTTEGPDSAVTPSDCAELVLDGSESQ YSGMQIGTLQDEEEEAAAPPDKPSEPFSQSVLALSKPHLLEGKGHNRQSSDSSVDRFIPK EEVLEPAELDNKPSRIKGEIGHYTDPKEEPLVHCVRLLAASFLLTGQRNGLVPDNEVRVS VKALAVSCVGAAAALLPDTFFNRLYLQPLDGQQPDEQQYISDVLQYIEHGDPQIRGATAI LCSALIQAIHLKTRYNTEMWLSHIHSITGNPVSIEDFVPLLQRSLKDESSVTCKMACAAV RHCIMALCNGSHSELGLQLLVDLLTLKDCSYWLVRTELLETLAEIDFRLVSFLERKTEKL HKGEHHYTGLLRLQDRVLNDVVLHLLGDDDPRVRHVAANTISRLVPRLFYDCDQAQADPV VAVARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYSLCQSSPDVTIDNNLSRVITALS HALTSSTSRAVTFGCCEALCHLSSTFPVCTWSTGWHCGFVSSSVFHLNRSSQYRSQGRSI SLSQPGSNEDVRRSLTVGVASMVLSLLTSAWFPLDLSAHQSALLLAGNLLAAVAPKCMKS PWAGEEDSSSAPSKQEEAWPALSDRSLVAMVEQLFSHLLKILNICAHVLDDTPPGPAVKA TLPSLSNTPSLSPIRRKGKEKEVTEPSSTPMSPKKGAETHTGRAADGTATAAVNKSTTLG SFYHLPPYLKLYDSLRATHANFKVTLDLHNTNEKFGSFLRSALDVLSQVLELATLNDIGK CVEEILGYLKSCFSREPTMATVCVQQLLKALFGTNLASQYEGSSSYPCRTQGKALRLGSS SLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDASGWFDVMQKVSNQLRSSITNV TRHRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQLVQLRVNYCLLDSD QVFIGFVLKQFEYIEVGQFRDSEKIVPNIFFFLVLLSYERYHSKQIISIPKIIQLCDGIM ASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELDTQKEVVVSMLLRLIQHHQVLEMF ILVLQQCHKENEDKWKRLSRQIADIILPMIGKQQMHLDSHEALGMLNTLFESVAPSSLRP VDMLLKSMFITPSTLASVGTVQLWVSGILAIVRVLISQSTEDIILSRIQELSLSPYLLSC ATIQQLCDDDLSPPAAPPTIPEESNGEPQRFPPEETFARFLLQLVGVLLDDIASKQVKVD MSEQQHTFYCQQLGTLLMCLIHIFKSGMFRRITAAGSRLLKVEGGEGGSFYALEGLNTLV LQLITTHPSLVLLWCQVLLIINYTNYTWWSEVHQTPRRHSLSSTKLLSPHSSGEEERPEG NLAMCNREIVRRGALILFCDYVCQNLHDSEHLTWLTVNHVSDLISLSHEPPVQDLISAVH RNSAASGLFIQAIQSRCDNLCTPVMLKKTLQCLEGIHLSQSGALLMLYVDKLLNTPFRVL ARMVDTLACRRVEMLLAETLQNSIAQLPLEELDRIQQYLQTSGLAQRHQRFYSLLDRFRA TVAEDTTSPAAPITSHPLDGDPPPPPENVEPNKEWYVALVKSQCCLRGEGALYETTELLT KLPQPDLNTIMTCKDFNLCLLASCVSVGAQRLCKHHGAVLFETAQQVAFERLAGVIELLP SPHQPLLISSKSCTDSYMEKVNQVYGEPGFYQTVLSLCGVLSQYLMSLSKLPSSLNIPKD RETLIATFSTLAVEVVVWRLLQDQLPLSVDIQMSLSCLCLALQQSVVWTHFTSRSYLSHT CSIIHCIQLLIHAVAVGPGDQLLRPERKTSHTDQSEDDQLDSASDNQREWRCCEIMAELV ESLQSVLALGHHRNKNIPAFLTPVLRNVIISLARLPLVNSYTRIPPLVWKLGWSPRPSGE FGTALPEIPVEFFQEKDVFREFLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEE SQQEEDLERTQINVLAVQAITSLVLSAMTLPTAGNPAVSCPEQQPRNKILKALDTRFGRK LSVIRGMVEREIQAMVSKRDNIATHFPYQAWDPVPSLSSSTAGTLISHEKLLLQINTERE MGNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDEADAPAPASPPVSPINSRKHRAGV DIHSCSQFLLELYSQWILPGSPSSRKTPVVLVSEVVRSLLAVSDLFTERNQFDMMFSTLT ELQKVHPPEDEILNQYLVPAICKAAAVLGMDKVIAEPVCRLLESTLRSTHLPSRIGALHG VLYVLECDLLDDTARQLIPAVSDYLLSNLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPL DVGSEFNAGVIQLCCVMLSASEEATPSVIYHCVLRGLERLLLSEQLSRVDAETLVKLSVD RVNMPSPHRAMAALGLMLTCMYTGVAGEEGKEKGSPGHPADADPTAPDSESVIVAMERVS VLFDRIRKGFPSEARVVSRILPQFLDDFFPLQDVMNKVIGEFLSNQQPYPQFMATVVYKV FQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVISR MGKSDTVDVSLFCLVAMDFYRHQIDEELDRRAFQSVFEMVASPGSPYYQLLCCLQSIHQD TSL NT seq 9372 nt NT seq  +upstreamnt  +downstreamnt atggccaccatggagaagctgatgaaggcgtttgagtcgctcaaatctttccagcagcag caaggcccgctgtcggccgaggagatcgtccagaaacaaaaaaaagaccttgctacaacc aaaaaggacagagtgactcattgcctgacgatttgtgaaaacatcgtggcacaatcgctg aggacatctccagagttccagaaacttcttggaattgccatggaaatgttcctgctgtgc agcgatgacaaggaatctgacgttagaatggtggcggatgagtgcctcaacaaaatcatc aaagcattgatggattctaacttacctagactgcagcttgaactgtacaaagagattaaa aagaatgctgcctctcggagtctccgggcagccctgtggaggtttgctgagcttgctcac ctggtgcgtccacagaaatgcaggccgtaccttgtgaatctgctgccgtgtctcactcga atcacgaaacgtcaggaggagactgtgcaggaaactctttcttcatcaattcctaaaatt atgtctgctctcggacactttgctaatgatggagaaatcaagatgctgctgaaggccttt gttgccaatctcaagtccagctctcccactatccgccgcactgcagccagctctgctgtc agtgtgtgtcagcactcacgcagaaaacactacttctacacctggctcctcaacgtgctg cttggtttggtggtaccagtggatgaggagcattccactcacctgattctgggtgtgtta ctgaccctgcgttacctgatgcctcttctgcagcagcagactccaaacaccagtctgaag ggcagctttgggcttgttcggaaagaggcagacgtatccccttcacccgagcagctcata caggtgtatgagctgaccctgcactacacacagcactgggatcataatgtggtgactgcg tctcttgagcttctgcagcaggtgtttcgcactcctccccctgagctcctgaaagttctc atcacagcgggcgaaataacacacaccaccgtcttcagagaagagatggaatcccgtgct cgcagtggcagcatccttgagcttattgctggtgggtcaacatgcagtcctctcctcctc aggaagcagaaaggtaaactgttgtcgggtgaagaagagggtttggaggatgaccctgag agggcagaagtcaccacagggtcattctctgcctcagtgggcggggataactccagcgaa gctccgtcctcctcaggcatttcgtcgctcggcacatctgacatcatcaccgagcagcca cgctcctcccagcatgctttgcagcctggggactcagttgacctgagcacgtcagagcag ggtgtcggacccgattccccagacgtcgaagatgaggacatgcttagccgcagctcgagc ggaggcgcaggagtcgccagcacatctggggatttaataagcgacagcaaccagatgtcg acgggaggaatctcgtcatcgccccctagtgacagttcccagacgactacggaggggccg gactccgccgtgacgccttcagactgcgccgagctcgtgttggatggcagtgaaagtcaa tactcagggatgcagatcggcacgctacaggatgaggaagaagaggcagcggcgccacct gacaaaccttcagagcctttctctcagtctgtactggctttaagcaaaccccacctactg gagggcaaaggtcacaacaggcagtcatccgacagcagtgtggatcgattcataccaaag gaagaggttctggaaccagcagaactcgacaacaagccatctcggattaaaggagaaatc ggtcactacactgacccaaaggaagagcctttggtgcactgtgtccggctgttggctgct tccttcctgctcacaggccaaagaaacgggctggttcctgataatgaggttcgtgtgagc gtgaaggcgttagctgttagctgtgtgggggctgcagccgctcttctacccgatacgttc tttaacagactctatctgcagccgctagatggacaacaaccagatgagcaacaatacatc agtgatgttctgcagtacattgaacatggagaccctcagatcagaggggccacagccatc ctctgtagtgctttaatccaagccatccatctaaagacacgctacaacacagagatgtgg ttgtctcacatccacagcatcacaggtaacccagtgtcaatcgaagactttgtgcctttg ctgcagcgcagtctaaaggacgaatcgtctgtcacgtgtaaaatggcctgtgctgctgtt aggcactgtatcatggcgctgtgtaatggcagtcacagtgaacttggcctgcagctgctc gttgacctcctgaccctgaaggactgctcctattggctggtccgcactgagctgctcgag acgctggctgagattgacttcagattagtaagtttcttggagagaaaaactgagaagttg cacaaaggagagcatcactacactgggttattgaggcttcaggacagagtgctgaatgat gttgtgcttcacctgctgggcgacgatgacccacgagtaagacacgtggcagcaaacacc atcagcaggctggtgccaagattgttttacgactgtgaccaggctcaggcggatccggtt gtggccgtagctcgagatcagagcagcgtgtacctgcagcttctgatgcacgagacccag ccgccatcacagtttactgtcagcactatcacacggacataccgaggctacagtctgtgt cagagctcaccggacgttacaatcgacaacaacctgtcacgggtcatcactgccctatct catgctctcacctcctctacgtccagagccgtgacttttggctgttgtgaggctctgtgc catctgtccagcactttcccagtgtgcacctggagcaccggctggcactgtggctttgtg agctcctctgtgtttcatctcaaccgttccagccagtaccgcagccaaggacgctccatc agtctttctcagcctggcagtaatgaggatgtacgcaggtctttgacagtgggcgtggcc agtatggttctgtctctcctcacctccgcctggtttccccttgatctctcagcccatcag tctgctctgctgctggctggaaaccttcttgcagcagttgcaccaaagtgcatgaagagt ccatgggcgggtgaggaggactccagctccgccccctccaagcaggaggaggcgtggccg gctcttagcgaccgctctttggttgctatggtggagcagctgttctcacacctgctgaag atcctcaacatctgcgcccatgttctggatgacacgcctccagggcctgctgtcaaggcg actttgccatcattgtccaatactccatctctcagtccgatcagacgcaagggtaaagag aaagaggtgacagagcccagctccactcccatgagcccaaagaagggagcagagacccac acaggcagagctgcagacggcacagcgacagcagcggttaacaaatctacaactctggga agcttttatcaccttcctccttacctgaagctttatgattccctgagagctactcatgcc aacttcaaagttacgttagacctccacaacaccaatgagaagtttggaagtttcttgagg tcagccctagatgttctttcccaggtgctcgagctggccaccctcaacgacataggcaaa tgtgttgaagagatcctgggttacctcaagtcttgtttctcacgggaacccactatggcc actgtttgtgtccaacagttgttaaaggcattgtttgggaccaatcttgcatctcagtat gaagggtcttcatcttacccatgtcggacccagggcaaggcccttcggctcggctcgagc agcttgaggcctggcctctatcactactgcttcatggccccgtacacacacttcacccag gccctcgcagacgctagcctacgaaacatggtgcaggctgagcaagaacaggatgcctct ggatggtttgatgtcatgcaaaaagtgtccaatcagctgaggtcgagcattaccaatgtc actcgccatcgaggggataagaacgcaattcacaatcacatccgcttgtttgagcctctg gtgataaaggcgttgaagcagtacaccaccagcacttcagtggccctgcagagacaggtg ctggatctactcgcccagctggtgcagctgagggtcaactactgcctgctggattcagac caggtgttcattggtttcgtgctaaagcagtttgagtacattgaagtagggcagttcagg gactcggaaaagattgtgcccaacattttcttcttcctggttttgctgtcatatgagcgc taccactccaagcagatcatcagcatcccgaagatcattcagctgtgtgacggcatcatg gccagcggcaggaaggcagtaacacacgcaatccctgctctgcagcccatcgtgcacgac ctgtttgtgcttcggggctctaataaagcggatgcagggaaagagctggacacccaaaag gaagtggtggtgtccatgctgctgcgcctcattcagcaccaccaggtgctggagatgttt attctggtcctacagcagtgccataaagaaaatgaagataagtggaagaggctttcgaga cagatcgctgacatcatcctgccaatgatcggcaaacagcagatgcacctggactcccat gaggcactgggcatgttaaacacactgtttgagagtgtggcaccctcctccctgaggcca gtggacatgctactgaagagcatgttcatcacaccgtctacccttgcatcggtcggcacg gtgcagttatgggtgtccggaattctcgccatcgttcgtgttctcatctcgcagtccacg gaggacatcattctgtctcgcattcaagagctttccctgtcgccatacctcctctcctgt gccaccatccagcaactctgtgacgatgacctctcaccccccgcagccccgcccactatc ccagaagagtccaatggggagcctcagcgcttccctcctgaggaaacctttgccaggttt ttgttgcagttggtgggggtgttgttggatgatattgccagtaagcaggtgaaggtcgac atgagtgagcaacagcatacgttctactgtcagcagctgggcacgttactcatgtgtctg atccacatctttaaatcaggaatgttccggcgaatcaccgcggcgggcagcaggctgctg aaggtggagggaggggaggggggtagtttttatgcccttgagggtttgaacacccttgtg cttcagctcatcacaacacacccgtctctggtcctgctctggtgtcaagttcttctcatc atcaactacacgaactacacctggtggtcagaggtgcatcagacccccaggaggcacagt ctgtctagcactaagcttctgagcccacattcatctggagaagaggagaggcctgaggga aatctagccatgtgtaaccgagagatcgttcgtcgaggggcgctcatcctcttctgtgac tacgtgtgtcaaaacctgcatgactccgagcatttaacgtggctgacggtgaatcacgtg agtgatctcatcagtctttcccatgagcctccggtgcaggacctcatcagcgctgtgcac cgaaactcggcggccagcggcctcttcatacaggctatacaatcacgctgtgacaacctc tgtactcctgtgatgctgaagaagaccctgcagtgtttggaaggaattcatttgagtcag tctggcgctctgctcatgctatacgtggacaaactcctcaacacgccgttccgtgtgctg gctcgcatggtggacactctcgcctgcagacgtgtggagatgctgcttgccgagaccctg cagaatagtatagctcagctacctcttgaggagctggacagaattcaacagtacctgcag accagtggccttgcgcaaaggcatcagcggttctactccctgctggaccggttcagagcc acagttgctgaagataccacaagtcctgctgcccctattacctcacacccactagatggg gacccgccccctccacctgaaaatgttgaacccaataaggagtggtacgttgctctggtg aagtctcagtgttgtttaagaggtgaaggagctctttatgaaaccaccgagctgctgacc aaacttccccaacctgatctgaacaccataatgacctgcaaggactttaacctgtgtctg ctggcatcatgtgtgagtgttggtgcgcagcggctgtgtaagcatcacggggcggtatta tttgagacagctcagcaggtggcctttgagcgattggctggtgtcatagagctcctcccc tcccctcaccagcccctccttatctcatccaagtcctgtacggactcctacatggagaaa gtcaatcaggtgtatggtgagcctgggttttatcagaccgtgttgagtctgtgtggggtg ttgagtcagtatctgatgtctctgtccaaacttccctcgtccctgaacattcccaaagac agagagacactcattgccaccttcagcacccttgccgtagaggtggtggtgtggcgtttg ctgcaggatcagctgcctctgagtgtggacattcagatgagtttatcatgtctgtgtttg gctctccaacagtcggtggtttggacacacttcacctcccgctcctacctctcacatacc tgctctataattcactgtatacagctcctcatccatgcagtcgctgttggtccgggtgac cagcttctgaggccagagaggaaaacatcacatacagatcagtcagaagacgaccagttg gactcggcgtcagataatcagcgtgaatggcggtgttgtgagatcatggctgagctggtt gaaagtctgcagagtgtgctggctctgggtcaccacagaaacaagaacatcccagcgttc cttacgcctgtcctccggaacgtaatcatcagtctggccaggctgcccctcgtaaacagc tacaccaggatcccacctctggtctggaagttgggctggtcccccagacctagtggagag tttggtacagctttgcctgaaatccctgtggagttttttcaagagaaagacgtctttaga gaattcctctatcgcattaacacactgggctggagcagtcggacacagttcgaggagaca tgggccactctgttgggggtgctggtcactcagccaatcacgatggaccaagaagaggag agccagcaggaggaggatctggagaggacgcagataaatgtactggcggttcaggccatc acctctctagtgctgagtgccatgactctaccaacagctggaaatccagccgtcagctgt cctgaacaacaacctcgcaacaagatccttaaagctctggacactagatttggccgtaag ctgagtgtcattagaggtatggtcgagcgcgagattcaggccatggtgtcaaagcgagac aacatcgccacacacttcccctatcaagcttgggaccccgtgccatcattatcgtcatcg acagctggcaccctcattagccatgagaaactacttctgcaaataaacacagagagggag atgggcaacatggactacaaactgggacaggtgtccattcactcagtttggttggggaat aatatcacccctctgagagaagaggagtggggtgaggatgaggaagatgaagcagatgct ccggcacctgcctcacctccagtgtcaccaataaactccaggaagcatcgtgctggtgtt gacatccactcctgctcccagttcctcctggagctctacagtcagtggatcctccccggc agccccagcagcaggaaaacacctgttgtgcttgtcagtgaagtggtcagatcgctgctg gcagtgtctgatctcttcacagagaggaatcagtttgatatgatgttctccactctgact gagctgcagaaggttcatccaccagaagatgagatcctcaatcaatacctcgtaccagct atctgcaaagcagcggctgtgctaggaatggataaagttatcgcagagcccgtgtgtcgt cttttggagagcaccttacgcagcactcacctgcccagtcgaattggagcactacatggg gttctgtatgtgctagaatgtgatctactagacgatacggcacgccagcttattccagcc gtcagtgactacctgctctccaacctaagagctattgctcactgcgtgaacctgcacaac cagcagcacgtgttggtgatgtgcgccgtggccttctacatgatggagaactaccctctg gacgtcgggtcagaattcaatgccggggtcattcagctgtgctgtgtgatgctttcggct agcgaagaggccacaccatctgtcatctaccactgtgtcctgcgaggtctggagcgactg cttctttccgagcagctttcacgcgtggatgcggagacgctggtcaagctgagcgttgac cgcgtgaacatgcccagtccacaccgcgccatggctgccctgggtctcatgctgacctgc atgtacacaggtgtggctggagaggaagggaaagagaagggaagtcctgggcaccctgcc gatgcagaccctacagctccggatagcgaatcggtaattgttgccatggagcgtgtatcc gttctctttgacaggatccgcaaaggctttccgagtgaggcacgcgtggtatcccggatc cttccccagttcctggatgactttttcccactgcaggacgttatgaacaaagtcatcgga gagttcctgtccaatcagcaaccttacccgcaatttatggcaacggtggtctacaaggta tttcagacacttcatgcaactggccagtcctccatggtccgtgattgggtgctcctctct ctgtcaaacttcacgcagagaacacctgtcgccatggcaatgtggagcctgtcttgtttc tttgtcagtgcttctaccagccagtggatctctgcccttctgcctcacgttataagtcgc atggggaagtcggacacagtggacgttagtcttttctgtcttgtcgctatggatttctat cgacaccagattgatgaagagttagaccgaagggccttccagtccgtctttgagatggtg gcgtctcctggtagtccttattaccaattgctgtgctgtttgcagagcattcaccaagac acatccttataa

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